RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 PKDREJQ9NTG1 2253 aa12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 RER1O15258 196 aa12.58□□□□□ -0.4
TNFRSF1A-216ENST00000543995 DOK2O60496 412 aa12.58□□□□□ -0.4
TNFRSF1A-216ENST00000543995 GOSR1O95249 250 aa12.58□□□□□ -0.4
TNFRSF1A-216ENST00000543995 CRYAAP02489 173 aa12.58□□□□□ -0.4
TNFRSF1A-216ENST00000543995 MRPL3P09001 348 aaKnown RBP12.58□□□□□ -0.4
TNFRSF1A-216ENST00000543995 ZNF14P17017 642 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF1A-216ENST00000543995 APLNRP35414 380 aa12.58□□□□□ -0.4
TNFRSF1A-216ENST00000543995 NAA10P41227 235 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF1A-216ENST00000543995 NAAAQ02083 359 aa12.58□□□□□ -0.4
TNFRSF1A-216ENST00000543995 IL18R1Q13478 541 aa12.58□□□□□ -0.4
TNFRSF1A-216ENST00000543995 SNCBQ16143 134 aa12.58□□□□□ -0.4
TNFRSF1A-216ENST00000543995 C6orf52Q5T4I8 152 aa12.58□□□□□ -0.4
TNFRSF1A-216ENST00000543995 ZNF774Q6NX45 483 aa12.58□□□□□ -0.4
TNFRSF1A-216ENST00000543995 TMEM200AQ86VY9 491 aa12.58□□□□□ -0.4
TNFRSF1A-216ENST00000543995 ZNF584Q8IVC4 421 aa12.58□□□□□ -0.4
TNFRSF1A-216ENST00000543995 SLC30A7Q8NEW0 376 aa12.58□□□□□ -0.4
TNFRSF1A-216ENST00000543995 RADILQ96JH8 1075 aa12.58□□□□□ -0.4
TNFRSF1A-216ENST00000543995 Q96MT0 163 aa12.58□□□□□ -0.4
TNFRSF1A-216ENST00000543995 ZNF75AQ96N20 296 aa12.58□□□□□ -0.4
TNFRSF1A-216ENST00000543995 WNT5BQ9H1J7 359 aa12.58□□□□□ -0.4
TNFRSF1A-216ENST00000543995 C1orf198Q9H425 327 aa12.58□□□□□ -0.4
TNFRSF1A-216ENST00000543995 AASSQ9UDR5 926 aa12.58□□□□□ -0.4
TNFRSF1A-216ENST00000543995 WARS2Q9UGM6 360 aaKnown RBP12.58□□□□□ -0.4
TNFRSF1A-216ENST00000543995 CYB5R1Q9UHQ9 305 aa12.58□□□□□ -0.4
TNFRSF1A-216ENST00000543995 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.58□□□□□ -0.4
TNFRSF1A-216ENST00000543995 SPTAN1Q13813 2472 aaKnown RBP12.58□□□□□ -0.4
TNFRSF1A-216ENST00000543995 SNTNA6NMZ2 147 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 ENTPD6O75354 484 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 CCNOP22674 350 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 STOMP27105 288 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 APEX1P27695 318 aaKnown RBP12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 HTR1FP30939 366 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 HSPA13P48723 471 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 TLE4Q04727 773 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 SPOCK1Q08629 439 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 OCLNQ16625 522 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 TBC1D28Q2M2D7 210 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 SLC18B1Q6NT16 456 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 ADAM5Q6NVV9 412 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 SLC22A25Q6T423 547 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 CFAP77Q6ZQR2 320 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 SHFQ7M4L6 423 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 DPY19L4Q7Z388 723 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 TIGD4Q8IY51 512 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 C8orf59Q8N0T1 100 aaPredicted RBP12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 ZNF295-AS1Q8N0V1 137 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 CPEB3Q8NE35 698 aaKnown RBP12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 IL17RDQ8NFM7 739 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 RHOXF1Q8NHV9 184 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 TFAP2CQ92754 450 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 C14orf79Q96F83 325 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 HS3ST6Q96QI5 342 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 MARCH7Q9H992 704 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 GDF2Q9UK05 429 aaPredicted RBP12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 RNF115Q9Y4L5 304 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 USP9YO00507 2555 aaPredicted RBP12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 CTAG2O75638 210 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 GNAO1P09471 354 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 PSKH1P11801 424 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 CCL2P13500 99 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 GABRB1P18505 474 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 SSTR2P30874 369 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 ATP6V1E1P36543 226 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 HTR5AP47898 357 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 EIF2B1Q14232 305 aaKnown RBP12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 RAB35Q15286 201 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 CCDC92Q53HC0 331 aaPredicted RBP12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 TEX30Q5JUR7 227 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 SLC25A30Q5SVS4 291 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 VASH1Q7L8A9 365 aaPredicted RBP12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 DCXRQ7Z4W1 244 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 OR1J2Q8NGS2 313 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 CNN2Q99439 309 aaKnown RBP12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 CLEC4MQ9H2X3 399 aaPredicted RBP12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 CDH20Q9HBT6 801 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 POU2F3Q9UKI9 436 aa12.57□□□□□ -0.4
TNFRSF1A-216ENST00000543995 ANKHD1Q8IWZ3 2542 aaKnown RBP12.56□□□□□ -0.4
TNFRSF1A-216ENST00000543995 C5orf49A4QMS7 147 aa12.56□□□□□ -0.4
TNFRSF1A-216ENST00000543995 ATP6V1G2-DDX39BF2Z307 99 aa12.56□□□□□ -0.4
TNFRSF1A-216ENST00000543995 PLAUP00749 431 aa12.56□□□□□ -0.4
TNFRSF1A-216ENST00000543995 LOXP28300 417 aaPredicted RBP12.56□□□□□ -0.4
TNFRSF1A-216ENST00000543995 GDI2P50395 445 aaKnown RBP12.56□□□□□ -0.4
TNFRSF1A-216ENST00000543995 HIST1H3AP68431 136 aa12.56□□□□□ -0.4
TNFRSF1A-216ENST00000543995 GALK2Q01415 458 aa12.56□□□□□ -0.4
TNFRSF1A-216ENST00000543995 TMED1Q13445 227 aa12.56□□□□□ -0.4
TNFRSF1A-216ENST00000543995 GGTLC2Q14390 218 aa12.56□□□□□ -0.4
TNFRSF1A-216ENST00000543995 MAD2L1BPQ15013 274 aaPredicted RBP12.56□□□□□ -0.4
TNFRSF1A-216ENST00000543995 PCK2Q16822 640 aa12.56□□□□□ -0.4
TNFRSF1A-216ENST00000543995 ELFN2Q5R3F8 820 aa12.56□□□□□ -0.4
TNFRSF1A-216ENST00000543995 HIST2H3PS2Q5TEC6 136 aa12.56□□□□□ -0.4
TNFRSF1A-216ENST00000543995 ZNF704Q6ZNC4 412 aaPredicted RBP12.56□□□□□ -0.4
TNFRSF1A-216ENST00000543995 HIST2H3AQ71DI3 136 aa12.56□□□□□ -0.4
TNFRSF1A-216ENST00000543995 SLC16A9Q7RTY1 509 aa12.56□□□□□ -0.4
TNFRSF1A-216ENST00000543995 KBTBD8Q8NFY9 601 aa12.56□□□□□ -0.4
TNFRSF1A-216ENST00000543995 OR51G2Q8NGK0 314 aa12.56□□□□□ -0.4
TNFRSF1A-216ENST00000543995 OR1F12Q8NHA8 337 aa12.56□□□□□ -0.4
TNFRSF1A-216ENST00000543995 CNIH3Q8TBE1 160 aa12.56□□□□□ -0.4
TNFRSF1A-216ENST00000543995 SMAP2Q8WU79 429 aaPredicted RBP12.56□□□□□ -0.4
TNFRSF1A-216ENST00000543995 THEM6Q8WUY1 208 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms