RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 HTRA1Q92743 480 aa17.54■□□□□ 0.4
COPS7A-218ENST00000543939 ZDHHC11Q9H8X9 412 aa17.54■□□□□ 0.4
COPS7A-218ENST00000543939 CENPMQ9NSP4 180 aa17.54■□□□□ 0.4
COPS7A-218ENST00000543939 SLC22A13Q9Y226 551 aa17.54■□□□□ 0.4
COPS7A-218ENST00000543939 POLR1DQ9Y2S0 133 aa17.54■□□□□ 0.4
COPS7A-218ENST00000543939 A0A1B0GVG6 124 aa17.53■□□□□ 0.4
COPS7A-218ENST00000543939 SLC43A1O75387 559 aa17.53■□□□□ 0.4
COPS7A-218ENST00000543939 H2BFMP0C1H6 154 aa17.53■□□□□ 0.4
COPS7A-218ENST00000543939 MAPK3P27361 379 aaPredicted RBP17.53■□□□□ 0.4
COPS7A-218ENST00000543939 LSM6P62312 80 aaKnown RBP17.53■□□□□ 0.4
COPS7A-218ENST00000543939 SFXN4Q6P4A7 337 aa17.53■□□□□ 0.4
COPS7A-218ENST00000543939 AAED1Q7RTV5 226 aa17.53■□□□□ 0.4
COPS7A-218ENST00000543939 OR10AC1Q8NH08 325 aa17.53■□□□□ 0.4
COPS7A-218ENST00000543939 GPR148Q8TDV2 347 aa17.53■□□□□ 0.4
COPS7A-218ENST00000543939 ABHD3Q8WU67 409 aa17.53■□□□□ 0.4
COPS7A-218ENST00000543939 ACOT12Q8WYK0 555 aa17.53■□□□□ 0.4
COPS7A-218ENST00000543939 KCTD12Q96CX2 325 aaKnown RBP17.53■□□□□ 0.4
COPS7A-218ENST00000543939 ULBP2Q9BZM5 246 aa17.53■□□□□ 0.4
COPS7A-218ENST00000543939 DEFB127Q9H1M4 99 aa17.53■□□□□ 0.4
COPS7A-218ENST00000543939 ZCCHC4Q9H5U6 513 aa17.53■□□□□ 0.4
COPS7A-218ENST00000543939 PAQR5Q9NXK6 330 aaPredicted RBP17.53■□□□□ 0.4
COPS7A-218ENST00000543939 COMMD3Q9UBI1 195 aa17.53■□□□□ 0.4
COPS7A-218ENST00000543939 IGKV3D-15A0A087WSY6 115 aa17.52■□□□□ 0.4
COPS7A-218ENST00000543939 TRBV5-7A0A0A0MS05 114 aa17.52■□□□□ 0.4
COPS7A-218ENST00000543939 LOC110117498-PIK3R3F6TDL0 507 aa17.52■□□□□ 0.4
COPS7A-218ENST00000543939 GFRA3O60609 400 aa17.52■□□□□ 0.4
COPS7A-218ENST00000543939 OCM2P0CE71 109 aa17.52■□□□□ 0.4
COPS7A-218ENST00000543939 SRMP19623 302 aa17.52■□□□□ 0.4
COPS7A-218ENST00000543939 MSR1P21757 451 aa17.52■□□□□ 0.4
COPS7A-218ENST00000543939 DCTDP32321 178 aa17.52■□□□□ 0.4
COPS7A-218ENST00000543939 THBS2P35442 1172 aa17.52■□□□□ 0.4
COPS7A-218ENST00000543939 PPP3R1P63098 170 aa17.52■□□□□ 0.4
COPS7A-218ENST00000543939 SGCAQ16586 387 aa17.52■□□□□ 0.4
COPS7A-218ENST00000543939 IDNKQ5T6J7 187 aa17.52■□□□□ 0.4
COPS7A-218ENST00000543939 MZT2AQ6P582 158 aa17.52■□□□□ 0.4
COPS7A-218ENST00000543939 RHOUQ7L0Q8 258 aa17.52■□□□□ 0.4
COPS7A-218ENST00000543939 SYT9Q86SS6 491 aa17.52■□□□□ 0.4
COPS7A-218ENST00000543939 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.52■□□□□ 0.4
COPS7A-218ENST00000543939 SNX29P2Q8IUI4 249 aa17.52■□□□□ 0.4
COPS7A-218ENST00000543939 PPP1R14AQ96A00 147 aa17.52■□□□□ 0.4
COPS7A-218ENST00000543939 NABP1Q96AH0 204 aa17.52■□□□□ 0.4
COPS7A-218ENST00000543939 TMEM45BQ96B21 275 aa17.52■□□□□ 0.4
COPS7A-218ENST00000543939 ORAI1Q96D31 301 aa17.52■□□□□ 0.4
COPS7A-218ENST00000543939 NELFAQ9H3P2 528 aa17.52■□□□□ 0.4
COPS7A-218ENST00000543939 G6PC2Q9NQR9 355 aa17.52■□□□□ 0.4
COPS7A-218ENST00000543939 ASH2LQ9UBL3 628 aa17.52■□□□□ 0.4
COPS7A-218ENST00000543939 EMC9Q9Y3B6 208 aa17.52■□□□□ 0.4
COPS7A-218ENST00000543939 V9GYH0 126 aa17.52■□□□□ 0.4
COPS7A-218ENST00000543939 KLK10O43240 276 aa17.52■□□□□ 0.39
COPS7A-218ENST00000543939 GUCA1AP43080 201 aaPredicted RBP17.52■□□□□ 0.39
COPS7A-218ENST00000543939 FOXC1Q12948 553 aa17.52■□□□□ 0.39
COPS7A-218ENST00000543939 ODF4Q2M2E3 257 aa17.52■□□□□ 0.39
COPS7A-218ENST00000543939 SLC25A35Q3KQZ1 300 aa17.52■□□□□ 0.39
COPS7A-218ENST00000543939 OR51A4Q8NGJ6 313 aa17.52■□□□□ 0.39
COPS7A-218ENST00000543939 SMAD5Q99717 465 aaKnown RBP17.52■□□□□ 0.39
COPS7A-218ENST00000543939 ZNF416Q9BWM5 594 aa17.52■□□□□ 0.39
COPS7A-218ENST00000543939 RBM24Q9BX46 236 aaKnown RBP17.52■□□□□ 0.39
COPS7A-218ENST00000543939 B3GAT2Q9NPZ5 323 aa17.52■□□□□ 0.39
COPS7A-218ENST00000543939 GTF2A1LQ9UNN4 478 aa17.52■□□□□ 0.39
COPS7A-218ENST00000543939 ARPC4-TTLL3A0A0A6YYG9 625 aa17.51■□□□□ 0.39
COPS7A-218ENST00000543939 TRAV17A0A0B4J275 112 aa17.51■□□□□ 0.39
COPS7A-218ENST00000543939 NOTOA8MTQ0 251 aa17.51■□□□□ 0.39
COPS7A-218ENST00000543939 UPK1BO75841 260 aa17.51■□□□□ 0.39
COPS7A-218ENST00000543939 SYNGR4O95473 234 aa17.51■□□□□ 0.39
COPS7A-218ENST00000543939 RAF1P04049 648 aa17.51■□□□□ 0.39
COPS7A-218ENST00000543939 SOX2P48431 317 aa17.51■□□□□ 0.39
COPS7A-218ENST00000543939 MMP16P51512 607 aa17.51■□□□□ 0.39
COPS7A-218ENST00000543939 ZNF84P51523 738 aa17.51■□□□□ 0.39
COPS7A-218ENST00000543939 ZNF837Q96EG3 531 aaPredicted RBP17.51■□□□□ 0.39
COPS7A-218ENST00000543939 LDAHQ9H6V9 325 aa17.51■□□□□ 0.39
COPS7A-218ENST00000543939 PNRC2Q9NPJ4 139 aaKnown RBP17.51■□□□□ 0.39
COPS7A-218ENST00000543939 OR52A1Q9UKL2 312 aa17.51■□□□□ 0.39
COPS7A-218ENST00000543939 TRGV5A0A0B4J1U4 118 aa17.5■□□□□ 0.39
COPS7A-218ENST00000543939 TMEM269A0A1B0GVZ9 245 aa17.5■□□□□ 0.39
COPS7A-218ENST00000543939 ZNF878C9JN71 531 aa17.5■□□□□ 0.39
COPS7A-218ENST00000543939 HPGDSO60760 199 aa17.5■□□□□ 0.39
COPS7A-218ENST00000543939 PMP22Q01453 160 aa17.5■□□□□ 0.39
COPS7A-218ENST00000543939 ENDOGQ14249 297 aaKnown RBP17.5■□□□□ 0.39
COPS7A-218ENST00000543939 THRSPQ92748 146 aa17.5■□□□□ 0.39
COPS7A-218ENST00000543939 SDHCQ99643 169 aaPredicted RBP17.5■□□□□ 0.39
COPS7A-218ENST00000543939 FAM206AQ9NX38 181 aa17.5■□□□□ 0.39
COPS7A-218ENST00000543939 SPRR3Q9UBC9 169 aa17.5■□□□□ 0.39
COPS7A-218ENST00000543939 DAPK2Q9UIK4 370 aa17.5■□□□□ 0.39
COPS7A-218ENST00000543939 MCTS1Q9ULC4 181 aaKnown RBP17.5■□□□□ 0.39
COPS7A-218ENST00000543939 AK6Q9Y3D8 172 aaKnown RBP17.5■□□□□ 0.39
COPS7A-218ENST00000543939 TNRC6AQ8NDV7 1962 aaKnown RBP17.5■□□□□ 0.39
COPS7A-218ENST00000543939 RER1O15258 196 aa17.5■□□□□ 0.39
COPS7A-218ENST00000543939 EPXP11678 715 aa17.5■□□□□ 0.39
COPS7A-218ENST00000543939 ZNF12P17014 697 aa17.5■□□□□ 0.39
COPS7A-218ENST00000543939 SPINK2P20155 84 aa17.5■□□□□ 0.39
COPS7A-218ENST00000543939 MRPS34P82930 218 aaKnown RBP17.5■□□□□ 0.39
COPS7A-218ENST00000543939 KLHL24Q6TFL4 600 aa17.5■□□□□ 0.39
COPS7A-218ENST00000543939 DIRAS2Q96HU8 199 aa17.5■□□□□ 0.39
COPS7A-218ENST00000543939 GFI1Q99684 422 aa17.5■□□□□ 0.39
COPS7A-218ENST00000543939 SLC25A18Q9H1K4 315 aa17.5■□□□□ 0.39
COPS7A-218ENST00000543939 PDCD5O14737 125 aa17.49■□□□□ 0.39
COPS7A-218ENST00000543939 TBX1O43435 398 aa17.49■□□□□ 0.39
COPS7A-218ENST00000543939 ISG15P05161 165 aa17.49■□□□□ 0.39
COPS7A-218ENST00000543939 SLC2A2P11168 524 aaPredicted RBP17.49■□□□□ 0.39
COPS7A-218ENST00000543939 CPN1P15169 458 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms