RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 STEAP1Q9UHE8 339 aa15.2■□□□□ 0.02
PTPRO-209ENST00000543886 OR52A1Q9UKL2 312 aa15.2■□□□□ 0.02
PTPRO-209ENST00000543886 TMEM269A0A1B0GVZ9 245 aa15.2■□□□□ 0.02
PTPRO-209ENST00000543886 CDX4O14627 284 aaPredicted RBP15.2■□□□□ 0.02
PTPRO-209ENST00000543886 ZIC3O60481 467 aa15.2■□□□□ 0.02
PTPRO-209ENST00000543886 RAMP1O60894 148 aa15.2■□□□□ 0.02
PTPRO-209ENST00000543886 SCAND1P57086 179 aa15.2■□□□□ 0.02
PTPRO-209ENST00000543886 TOMM20Q15388 145 aa15.2■□□□□ 0.02
PTPRO-209ENST00000543886 TBRG1Q3YBR2 411 aa15.2■□□□□ 0.02
PTPRO-209ENST00000543886 SLC36A2Q495M3 483 aa15.2■□□□□ 0.02
PTPRO-209ENST00000543886 ZFP69Q49AA0 526 aa15.2■□□□□ 0.02
PTPRO-209ENST00000543886 BCL2L15Q5TBC7 163 aa15.2■□□□□ 0.02
PTPRO-209ENST00000543886 SERPINA12Q8IW75 414 aa15.2■□□□□ 0.02
PTPRO-209ENST00000543886 SLAMF6Q96DU3 332 aa15.2■□□□□ 0.02
PTPRO-209ENST00000543886 MARVELD1Q9BSK0 173 aa15.2■□□□□ 0.02
PTPRO-209ENST00000543886 CYB5R1Q9UHQ9 305 aa15.2■□□□□ 0.02
PTPRO-209ENST00000543886 HHLA2Q9UM44 414 aa15.2■□□□□ 0.02
PTPRO-209ENST00000543886 N6AMT1Q9Y5N5 214 aa15.2■□□□□ 0.02
PTPRO-209ENST00000543886 TTC28Q96AY4 2481 aa15.19■□□□□ 0.02
PTPRO-209ENST00000543886 CACNA1CQ13936 2221 aa15.19■□□□□ 0.02
PTPRO-209ENST00000543886 CFAP54Q96N23 3096 aa15.19■□□□□ 0.02
PTPRO-209ENST00000543886 OR2M5A3KFT3 312 aa15.19■□□□□ 0.02
PTPRO-209ENST00000543886 C9orf172C9J069 976 aa15.19■□□□□ 0.02
PTPRO-209ENST00000543886 TLX3O43711 291 aaPredicted RBP15.19■□□□□ 0.02
PTPRO-209ENST00000543886 DDOSTP39656 456 aa15.19■□□□□ 0.02
PTPRO-209ENST00000543886 TMEM69Q5SWH9 247 aa15.19■□□□□ 0.02
PTPRO-209ENST00000543886 TMEM164Q5U3C3 297 aa15.19■□□□□ 0.02
PTPRO-209ENST00000543886 B3GNTL1Q67FW5 361 aaPredicted RBP15.19■□□□□ 0.02
PTPRO-209ENST00000543886 KLHL24Q6TFL4 600 aa15.19■□□□□ 0.02
PTPRO-209ENST00000543886 ZNF704Q6ZNC4 412 aaPredicted RBP15.19■□□□□ 0.02
PTPRO-209ENST00000543886 PRSS45Q7RTY3 260 aa15.19■□□□□ 0.02
PTPRO-209ENST00000543886 ESX1Q8N693 406 aa15.19■□□□□ 0.02
PTPRO-209ENST00000543886 OR13C3Q8NGS6 347 aa15.19■□□□□ 0.02
PTPRO-209ENST00000543886 C17orf50Q8WW18 174 aa15.19■□□□□ 0.02
PTPRO-209ENST00000543886 ASB5Q8WWX0 329 aa15.19■□□□□ 0.02
PTPRO-209ENST00000543886 PIGQQ9BRB3 760 aa15.19■□□□□ 0.02
PTPRO-209ENST00000543886 C1orf198Q9H425 327 aa15.19■□□□□ 0.02
PTPRO-209ENST00000543886 G6PC2Q9NQR9 355 aa15.19■□□□□ 0.02
PTPRO-209ENST00000543886 P4HTMQ9NXG6 502 aa15.19■□□□□ 0.02
PTPRO-209ENST00000543886 H0YC42 278 aa15.18■□□□□ 0.02
PTPRO-209ENST00000543886 EIF1BO60739 113 aaKnown RBP15.18■□□□□ 0.02
PTPRO-209ENST00000543886 SERPINA7P05543 415 aa15.18■□□□□ 0.02
PTPRO-209ENST00000543886 KLK2P20151 261 aa15.18■□□□□ 0.02
PTPRO-209ENST00000543886 ACHEP22303 614 aa15.18■□□□□ 0.02
PTPRO-209ENST00000543886 HLA-DMAP28067 261 aa15.18■□□□□ 0.02
PTPRO-209ENST00000543886 DNASE1L1P49184 302 aa15.18■□□□□ 0.02
PTPRO-209ENST00000543886 MRPS15P82914 257 aaKnown RBP15.18■□□□□ 0.02
PTPRO-209ENST00000543886 CDCP2Q5VXM1 449 aa15.18■□□□□ 0.02
PTPRO-209ENST00000543886 SIAH3Q8IW03 269 aa15.18■□□□□ 0.02
PTPRO-209ENST00000543886 OR2AJ1Q8NGZ0 328 aa15.18■□□□□ 0.02
PTPRO-209ENST00000543886 FOXJ3Q9UPW0 622 aa15.18■□□□□ 0.02
PTPRO-209ENST00000543886 ALG5Q9Y673 324 aa15.18■□□□□ 0.02
PTPRO-209ENST00000543886 WDFY3Q8IZQ1 3526 aa15.18■□□□□ 0.02
PTPRO-209ENST00000543886 LOC107986453A0A1B0GWG9 222 aa15.18■□□□□ 0.02
PTPRO-209ENST00000543886 GJE1A6NN92 205 aa15.18■□□□□ 0.02
PTPRO-209ENST00000543886 INMT-MINDY4F8WBC2 141 aa15.18■□□□□ 0.02
PTPRO-209ENST00000543886 ISG15P05161 165 aa15.18■□□□□ 0.02
PTPRO-209ENST00000543886 UBCP0CG48 685 aaKnown RBP15.18■□□□□ 0.02
PTPRO-209ENST00000543886 NR2C1P13056 603 aa15.18■□□□□ 0.02
PTPRO-209ENST00000543886 CLDN17P56750 224 aa15.18■□□□□ 0.02
PTPRO-209ENST00000543886 CSNK2A1P68400 391 aaPredicted RBP15.18■□□□□ 0.02
PTPRO-209ENST00000543886 PLA1AQ53H76 456 aa15.18■□□□□ 0.02
PTPRO-209ENST00000543886 SLC25A47Q6Q0C1 308 aa15.18■□□□□ 0.02
PTPRO-209ENST00000543886 SLC7A6Q92536 515 aa15.18■□□□□ 0.02
PTPRO-209ENST00000543886 HAVCR1Q96D42 359 aa15.18■□□□□ 0.02
PTPRO-209ENST00000543886 NAA11Q9BSU3 229 aaPredicted RBP15.18■□□□□ 0.02
PTPRO-209ENST00000543886 SPRY4Q9C004 299 aa15.18■□□□□ 0.02
PTPRO-209ENST00000543886 DPAGT1Q9H3H5 408 aa15.18■□□□□ 0.02
PTPRO-209ENST00000543886 AUNIPQ9H7T9 357 aa15.18■□□□□ 0.02
PTPRO-209ENST00000543886 EMC7Q9NPA0 242 aa15.18■□□□□ 0.02
PTPRO-209ENST00000543886 FOXJ2Q9P0K8 574 aa15.18■□□□□ 0.02
PTPRO-209ENST00000543886 NUFIP1Q9UHK0 495 aaKnown RBP15.18■□□□□ 0.02
PTPRO-209ENST00000543886 CDV3Q9UKY7 258 aaKnown RBP15.18■□□□□ 0.02
PTPRO-209ENST00000543886 CCDC187A0A096LP49 1063 aa15.17■□□□□ 0.02
PTPRO-209ENST00000543886 A8MV72 311 aaPredicted RBP15.17■□□□□ 0.02
PTPRO-209ENST00000543886 SULT1B1O43704 296 aa15.17■□□□□ 0.02
PTPRO-209ENST00000543886 QDPRP09417 244 aa15.17■□□□□ 0.02
PTPRO-209ENST00000543886 FSTP19883 344 aa15.17■□□□□ 0.02
PTPRO-209ENST00000543886 CFPP27918 469 aa15.17■□□□□ 0.02
PTPRO-209ENST00000543886 AGFG1P52594 562 aaKnown RBP15.17■□□□□ 0.02
PTPRO-209ENST00000543886 H3F3AP84243 136 aa15.17■□□□□ 0.02
PTPRO-209ENST00000543886 RAB11BQ15907 218 aa15.17■□□□□ 0.02
PTPRO-209ENST00000543886 ACER2Q5QJU3 275 aa15.17■□□□□ 0.02
PTPRO-209ENST00000543886 STPG1Q5TH74 334 aa15.17■□□□□ 0.02
PTPRO-209ENST00000543886 TMEM244Q5VVB8 128 aa15.17■□□□□ 0.02
PTPRO-209ENST00000543886 H3F3CQ6NXT2 135 aa15.17■□□□□ 0.02
PTPRO-209ENST00000543886 MTFR2Q6P444 385 aa15.17■□□□□ 0.02
PTPRO-209ENST00000543886 ASCC1Q8N9N2 400 aaKnown RBP15.17■□□□□ 0.02
PTPRO-209ENST00000543886 C15orf40Q8WUR7 153 aa15.17■□□□□ 0.02
PTPRO-209ENST00000543886 CDC6Q99741 560 aa15.17■□□□□ 0.02
PTPRO-209ENST00000543886 C7orf50Q9BRJ6 194 aaKnown RBP15.17■□□□□ 0.02
PTPRO-209ENST00000543886 GDF2Q9UK05 429 aaPredicted RBP15.17■□□□□ 0.02
PTPRO-209ENST00000543886 GPR179Q6PRD1 2367 aa15.17■□□□□ 0.02
PTPRO-209ENST00000543886 TTLL8A6PVC2 850 aa15.16■□□□□ 0.02
PTPRO-209ENST00000543886 DOK2O60496 412 aa15.16■□□□□ 0.02
PTPRO-209ENST00000543886 MT-CO3P00414 261 aa15.16■□□□□ 0.02
PTPRO-209ENST00000543886 CDK2P24941 298 aa15.16■□□□□ 0.02
PTPRO-209ENST00000543886 CDAP32320 146 aa15.16■□□□□ 0.02
PTPRO-209ENST00000543886 BTCP35070 178 aa15.16■□□□□ 0.02
PTPRO-209ENST00000543886 GDNFP39905 211 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms