RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 LYPD6Q86Y78 171 aa12.58□□□□□ -0.4
LDB3-207ENST00000542786 SIAH3Q8IW03 269 aa12.58□□□□□ -0.4
LDB3-207ENST00000542786 RAB40AQ8WXH6 277 aa12.58□□□□□ -0.4
LDB3-207ENST00000542786 SLAMF6Q96DU3 332 aa12.58□□□□□ -0.4
LDB3-207ENST00000542786 ZFP3Q96NJ6 502 aa12.58□□□□□ -0.4
LDB3-207ENST00000542786 AUNIPQ9H7T9 357 aa12.58□□□□□ -0.4
LDB3-207ENST00000542786 EMC7Q9NPA0 242 aa12.58□□□□□ -0.4
LDB3-207ENST00000542786 STEAP1Q9UHE8 339 aa12.58□□□□□ -0.4
LDB3-207ENST00000542786 DKKL1Q9UK85 242 aa12.58□□□□□ -0.4
LDB3-207ENST00000542786 RBMX2Q9Y388 322 aaKnown RBP12.58□□□□□ -0.4
LDB3-207ENST00000542786 A0A0J9YW62 118 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 LOC107986453A0A1B0GWG9 222 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 ANXA2P2A6NMY6 339 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 ANXA2P07355 339 aaKnown RBP12.57□□□□□ -0.4
LDB3-207ENST00000542786 ZNF43P17038 809 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 SRD5A2P31213 254 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 INPP1P49441 399 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 SRP9P49458 86 aaKnown RBP12.57□□□□□ -0.4
LDB3-207ENST00000542786 RAC1P63000 192 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 TATDN3Q17R31 274 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 RSBN1Q5VWQ0 802 aaPredicted RBP12.57□□□□□ -0.4
LDB3-207ENST00000542786 FOXL2NBQ6ZUU3 175 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 PRSS45Q7RTY3 260 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 BIVMQ86UB2 503 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 TMEM123Q8N131 208 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 ESX1Q8N693 406 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 SYNPRQ8TBG9 265 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 TMEM54Q969K7 222 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 SLC25A28Q96A46 364 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 UCN2Q96RP3 112 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 PNRC2Q9NPJ4 139 aaKnown RBP12.57□□□□□ -0.4
LDB3-207ENST00000542786 DEPPQ9NTK1 212 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 DDX28Q9NUL7 540 aaKnown RBP12.57□□□□□ -0.4
LDB3-207ENST00000542786 GDF2Q9UK05 429 aaPredicted RBP12.57□□□□□ -0.4
LDB3-207ENST00000542786 RHBDD3Q9Y3P4 386 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 ALG5Q9Y673 324 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 A0A1W2PPL8 197 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 SLC17A2O00624 439 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 TPPPO94811 219 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 ITGA5P08648 1049 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 H2BFMP0C1H6 154 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 CDAP32320 146 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 BTG1P62324 171 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 CARD17Q5XLA6 110 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 CREB3L2Q70SY1 520 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 BEST3Q8N1M1 668 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 ZIC4Q8N9L1 334 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 OR10H5Q8NGA6 315 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 ADAMTS17Q8TE56 1095 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 CREB3L1Q96BA8 519 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 OR2M2Q96R28 347 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 EDEM2Q9BV94 578 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 SRXN1Q9BYN0 137 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 TAS2R4Q9NYW5 299 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 HHLA2Q9UM44 414 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 GTF2A1LQ9UNN4 478 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 DHDHQ9UQ10 334 aa12.57□□□□□ -0.4
LDB3-207ENST00000542786 MRPS7Q9Y2R9 242 aaKnown RBP12.57□□□□□ -0.4
LDB3-207ENST00000542786 NCKAP5O14513 1909 aa12.56□□□□□ -0.4
LDB3-207ENST00000542786 TMEM269A0A1B0GVZ9 245 aa12.56□□□□□ -0.4
LDB3-207ENST00000542786 C21orf140B9A014 251 aa12.56□□□□□ -0.4
LDB3-207ENST00000542786 SULT1B1O43704 296 aa12.56□□□□□ -0.4
LDB3-207ENST00000542786 LMX1BO60663 402 aa12.56□□□□□ -0.4
LDB3-207ENST00000542786 EIF1BO60739 113 aaKnown RBP12.56□□□□□ -0.4
LDB3-207ENST00000542786 TTRP02766 147 aa12.56□□□□□ -0.4
LDB3-207ENST00000542786 QDPRP09417 244 aa12.56□□□□□ -0.4
LDB3-207ENST00000542786 RFPL3SP0C7P2 107 aa12.56□□□□□ -0.4
LDB3-207ENST00000542786 TMIGD3P0DMS9 266 aaPredicted RBP12.56□□□□□ -0.4
LDB3-207ENST00000542786 CDK2P24941 298 aa12.56□□□□□ -0.4
LDB3-207ENST00000542786 ART1P52961 327 aa12.56□□□□□ -0.4
LDB3-207ENST00000542786 SUCLG1P53597 346 aaKnown RBP12.56□□□□□ -0.4
LDB3-207ENST00000542786 CLDN17P56750 224 aa12.56□□□□□ -0.4
LDB3-207ENST00000542786 CBX3Q13185 183 aa12.56□□□□□ -0.4
LDB3-207ENST00000542786 EIF3IQ13347 325 aaKnown RBP12.56□□□□□ -0.4
LDB3-207ENST00000542786 RNASE12Q5GAN4 147 aaKnown RBP12.56□□□□□ -0.4
LDB3-207ENST00000542786 PHYHD1Q5SRE7 291 aa12.56□□□□□ -0.4
LDB3-207ENST00000542786 C10orf128Q5T292 105 aa12.56□□□□□ -0.4
LDB3-207ENST00000542786 ZNF704Q6ZNC4 412 aaPredicted RBP12.56□□□□□ -0.4
LDB3-207ENST00000542786 GGNQ86UU5 652 aa12.56□□□□□ -0.4
LDB3-207ENST00000542786 SERPINA12Q8IW75 414 aa12.56□□□□□ -0.4
LDB3-207ENST00000542786 ELMOD2Q8IZ81 293 aa12.56□□□□□ -0.4
LDB3-207ENST00000542786 OR9K2Q8NGE7 335 aa12.56□□□□□ -0.4
LDB3-207ENST00000542786 JSRP1Q96MG2 331 aaPredicted RBP12.56□□□□□ -0.4
LDB3-207ENST00000542786 CDC6Q99741 560 aa12.56□□□□□ -0.4
LDB3-207ENST00000542786 PIGQQ9BRB3 760 aa12.56□□□□□ -0.4
LDB3-207ENST00000542786 GPR87Q9BY21 358 aa12.56□□□□□ -0.4
LDB3-207ENST00000542786 C1orf198Q9H425 327 aa12.56□□□□□ -0.4
LDB3-207ENST00000542786 PCDHGA1Q9Y5H4 931 aa12.56□□□□□ -0.4
LDB3-207ENST00000542786 PINLYPA6NC86 204 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 GABARAPH6UMI1 98 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 DNPH1O43598 174 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 ORC5O43913 435 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 P04436 131 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 ACSM4P0C7M7 580 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 UBCP0CG48 685 aaKnown RBP12.55□□□□□ -0.4
LDB3-207ENST00000542786 EFNB2P52799 333 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 FOXO1Q12778 655 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 KCNJ8Q15842 424 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 TBRG1Q3YBR2 411 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 BCL2L15Q5TBC7 163 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms