RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 SMIM6P0DI80 62 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 ICAM2P13598 275 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 ZNF35P13682 527 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 GTF2F2P13984 249 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 SPI1P17947 270 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 RPL4P36578 427 aaKnown RBP9.39□□□□□ -0.91
CHFR-219ENST00000541341 BCL6P41182 706 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 GPR3P46089 330 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 RAB5BP61020 215 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 HHEXQ03014 270 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 SRSF1Q07955 248 aaKnown RBP eCLIP9.39□□□□□ -0.91
CHFR-219ENST00000541341 KIR2DS3Q14952 304 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 GPR68Q15743 365 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 CDNFQ49AH0 187 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 ALG10BQ5I7T1 473 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 FAM27D1Q5T7N8 215 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 HES5Q5TA89 166 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 DHRS7BQ6IAN0 325 aaPredicted RBP9.39□□□□□ -0.91
CHFR-219ENST00000541341 C11orf87Q6NUJ2 197 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 DRAM2Q6UX65 266 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 LINC00114Q6XXX2 140 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 SLC16A11Q8NCK7 471 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 OR2L3Q8NG85 312 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 OR5M8Q8NGP6 311 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 OR13C2Q8NGS9 318 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 LIPHQ8WWY8 451 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 SLC25A38Q96DW6 304 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 ARL5BQ96KC2 179 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 CXorf58Q96LI9 332 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 TAAR9Q96RI9 348 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 PHB2Q99623 299 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 SEC11CQ9BY50 192 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.39□□□□□ -0.91
CHFR-219ENST00000541341 NMNAT2Q9BZQ4 307 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 SLC2A8Q9NY64 477 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 ZNF629Q9UEG4 869 aaPredicted RBP9.39□□□□□ -0.91
CHFR-219ENST00000541341 CLEC4AQ9UMR7 237 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 MRPS18BQ9Y676 258 aaKnown RBP9.39□□□□□ -0.91
CHFR-219ENST00000541341 NAV2Q8IVL1 2488 aa9.39□□□□□ -0.91
CHFR-219ENST00000541341 MAST4O15021 2626 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 IGHV1OR21-1A0A087WYE8 117 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 LOC101059948A0A1B0GTJ6 334 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 TMEM218A2RU14 115 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 RNF222A6NCQ9 220 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 OR5H14A6NHG9 310 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 TAAR5O14804 337 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 PRICKLE3O43900 615 aaPredicted RBP9.38□□□□□ -0.91
CHFR-219ENST00000541341 FCMRO60667 390 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 NKX2-2O95096 273 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 LYPD3O95274 346 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 RAB3DO95716 219 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 RENP00797 406 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 THY1P04216 161 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 MRPL3P09001 348 aaKnown RBP9.38□□□□□ -0.91
CHFR-219ENST00000541341 ANXA7P20073 488 aaKnown RBP9.38□□□□□ -0.91
CHFR-219ENST00000541341 CD34P28906 385 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 TACR3P29371 465 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 RFC3P40938 356 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 CX3CR1P49238 355 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 FXYD6P3P58550 94 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 BTN3A2P78410 334 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 SQSTM1Q13501 440 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 GPR18Q14330 331 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 RAB11BQ15907 218 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 NKPD1Q17RQ9 610 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 DEFB109BQ30KR1 87 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 ACTBL2Q562R1 376 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 RNASE12Q5GAN4 147 aaKnown RBP9.38□□□□□ -0.91
CHFR-219ENST00000541341 C10orf91Q5T1B1 145 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 AVPI1Q5T686 147 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 HIST2H2BCQ6DN03 193 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 ZNF425Q6IV72 752 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 COMMD1Q8N668 190 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 OR52E1Q8NGJ3 308 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 HOXB13Q92826 284 aaPredicted RBP9.38□□□□□ -0.91
CHFR-219ENST00000541341 ADAD1Q96M93 576 aaKnown RBP9.38□□□□□ -0.91
CHFR-219ENST00000541341 RAB33BQ9H082 229 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 QRSL1Q9H0R6 528 aaKnown RBP9.38□□□□□ -0.91
CHFR-219ENST00000541341 MED20Q9H944 212 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 ZFP57Q9NU63 452 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 KLK11Q9UBX7 282 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 TNFSF18Q9UNG2 199 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 FLVCR2Q9UPI3 526 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 KCNE3Q9Y6H6 103 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 FLNCQ14315 2725 aa9.38□□□□□ -0.91
CHFR-219ENST00000541341 NBPF19A0A087WUL8 3843 aa9.37□□□□□ -0.91
CHFR-219ENST00000541341 TRBV5-7A0A0A0MS05 114 aa9.37□□□□□ -0.91
CHFR-219ENST00000541341 A0A0B4J2A0 478 aa9.37□□□□□ -0.91
CHFR-219ENST00000541341 A0A1B0GVC2 190 aa9.37□□□□□ -0.91
CHFR-219ENST00000541341 A6NIN4 97 aa9.37□□□□□ -0.91
CHFR-219ENST00000541341 OR2AT4A6NND4 320 aa9.37□□□□□ -0.91
CHFR-219ENST00000541341 A8MUA0 341 aa9.37□□□□□ -0.91
CHFR-219ENST00000541341 SLC17A2O00624 439 aa9.37□□□□□ -0.91
CHFR-219ENST00000541341 FRS3O43559 492 aa9.37□□□□□ -0.91
CHFR-219ENST00000541341 GPR75O95800 540 aa9.37□□□□□ -0.91
CHFR-219ENST00000541341 TXNDC12O95881 172 aa9.37□□□□□ -0.91
CHFR-219ENST00000541341 OR4E1P0C645 316 aa9.37□□□□□ -0.91
CHFR-219ENST00000541341 FOLR2P14207 255 aa9.37□□□□□ -0.91
CHFR-219ENST00000541341 RAB6AP20340 208 aa9.37□□□□□ -0.91
CHFR-219ENST00000541341 CERS1P27544 350 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms