RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 MADCAM1Q13477 382 aa3.6□□□□□ -1.83
YBX3-210ENST00000540975 NSDHLQ15738 373 aa3.6□□□□□ -1.83
YBX3-210ENST00000540975 USF2Q15853 346 aaPredicted RBP3.6□□□□□ -1.83
YBX3-210ENST00000540975 KCTD19Q17RG1 926 aaPredicted RBP3.6□□□□□ -1.83
YBX3-210ENST00000540975 LINC01620Q4KN68 170 aa3.6□□□□□ -1.83
YBX3-210ENST00000540975 PAGE3Q5JUK9 113 aa3.6□□□□□ -1.83
YBX3-210ENST00000540975 MLIPQ5VWP3 458 aa3.6□□□□□ -1.83
YBX3-210ENST00000540975 MFSD14CQ5VZR4 134 aa3.6□□□□□ -1.83
YBX3-210ENST00000540975 RAET1GQ6H3X3 334 aa3.6□□□□□ -1.83
YBX3-210ENST00000540975 FAM199XQ6PEV8 388 aaPredicted RBP3.6□□□□□ -1.83
YBX3-210ENST00000540975 ARSKQ6UWY0 536 aa3.6□□□□□ -1.83
YBX3-210ENST00000540975 TMIGD1Q6UXZ0 262 aa3.6□□□□□ -1.83
YBX3-210ENST00000540975 ARCQ7LC44 396 aa3.6□□□□□ -1.83
YBX3-210ENST00000540975 APTXQ7Z2E3 356 aaKnown RBP3.6□□□□□ -1.83
YBX3-210ENST00000540975 CYP4Z1Q86W10 505 aa3.6□□□□□ -1.83
YBX3-210ENST00000540975 FAM71E2Q8N5Q1 922 aa3.6□□□□□ -1.83
YBX3-210ENST00000540975 COMMD1Q8N668 190 aa3.6□□□□□ -1.83
YBX3-210ENST00000540975 KCTD4Q8WVF5 259 aa3.6□□□□□ -1.83
YBX3-210ENST00000540975 PYDC1Q8WXC3 89 aa3.6□□□□□ -1.83
YBX3-210ENST00000540975 CTRCQ99895 268 aa3.6□□□□□ -1.83
YBX3-210ENST00000540975 SEC22CQ9BRL7 303 aa3.6□□□□□ -1.83
YBX3-210ENST00000540975 TMEM175Q9BSA9 504 aa3.6□□□□□ -1.83
YBX3-210ENST00000540975 POLR2J2Q9GZM3 115 aaKnown RBP3.6□□□□□ -1.83
YBX3-210ENST00000540975 POLR2J3Q9H1A7 115 aaKnown RBP3.6□□□□□ -1.83
YBX3-210ENST00000540975 RGCCQ9H4X1 137 aa3.6□□□□□ -1.83
YBX3-210ENST00000540975 VAT1LQ9HCJ6 419 aa3.6□□□□□ -1.83
YBX3-210ENST00000540975 ZDHHC4Q9NPG8 344 aa3.6□□□□□ -1.83
YBX3-210ENST00000540975 SAMSN1Q9NSI8 373 aaKnown RBP3.6□□□□□ -1.83
YBX3-210ENST00000540975 UFSP2Q9NUQ7 469 aa3.6□□□□□ -1.83
YBX3-210ENST00000540975 RBAKQ9NYW8 714 aaPredicted RBP3.6□□□□□ -1.83
YBX3-210ENST00000540975 ZNF223Q9UK11 482 aaPredicted RBP3.6□□□□□ -1.83
YBX3-210ENST00000540975 ADAM28Q9UKQ2 775 aa3.6□□□□□ -1.83
YBX3-210ENST00000540975 ACOT9Q9Y305 439 aa3.6□□□□□ -1.83
YBX3-210ENST00000540975 IFT172Q9UG01 1749 aa3.6□□□□□ -1.83
YBX3-210ENST00000540975 MAP3K15Q6ZN16 1313 aa3.6□□□□□ -1.83
YBX3-210ENST00000540975 ABCC12Q96J65 1359 aa3.6□□□□□ -1.83
YBX3-210ENST00000540975 NCAPD2Q15021 1401 aa3.6□□□□□ -1.83
YBX3-210ENST00000540975 ANKARQ7Z5J8 1434 aa3.6□□□□□ -1.83
YBX3-210ENST00000540975 ZNFX1Q9P2E3 1918 aaKnown RBP3.6□□□□□ -1.83
YBX3-210ENST00000540975 NEO1Q92859 1461 aa3.6□□□□□ -1.83
YBX3-210ENST00000540975 CDC42BPGQ6DT37 1551 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 A0A0U1RQS6 177 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 ESYT2A0FGR8 921 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 A6NDX4 124 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 HELTA6NFD8 242 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 LINC00587B1AMM8 73 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 E5RI56 91 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 ITGB1BP1O14713 200 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 STX7O15400 261 aaKnown RBP3.59□□□□□ -1.83
YBX3-210ENST00000540975 TOX3O15405 576 aaPredicted RBP3.59□□□□□ -1.83
YBX3-210ENST00000540975 KRT75O95678 551 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 LALBAP00709 142 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 APOC1P02654 83 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 IFNA6P05013 189 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 IGF1P05019 195 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 SERPINA6P08185 405 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 PLEKP08567 350 aaPredicted RBP3.59□□□□□ -1.83
YBX3-210ENST00000540975 IQCF3P0C7M6 154 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 TNNI1P19237 187 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 CASP14P31944 242 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 YWHABP31946 246 aaKnown RBP3.59□□□□□ -1.83
YBX3-210ENST00000540975 DLSTP36957 453 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 LHX2P50458 406 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 RELAQ04206 551 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 UNC119Q13432 240 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 TRIP10Q15642 601 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 UAP1Q16222 522 aaPredicted RBP3.59□□□□□ -1.83
YBX3-210ENST00000540975 KCTD16Q68DU8 428 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 PYHIN1Q6K0P9 492 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 SLC25A25Q6KCM7 469 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 RNF165Q6ZSG1 346 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 GID4Q8IVV7 300 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 TRAM1L1Q8N609 369 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 ATP6V0D2Q8N8Y2 350 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 Q8N9W7 124 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 MDS2Q8NDY4 140 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 OR6Q1Q8NGQ2 317 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 LRRC20Q8TCA0 184 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 DTX3LQ8TDB6 740 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 TCP10LQ8TDR4 215 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 HAUS1Q96CS2 278 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 PLEKHA8Q96JA3 519 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 CSPG4P5Q96PW8 444 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 TUBGCP2Q9BSJ2 902 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 PRRG3Q9BZD7 231 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 PKIBQ9C010 78 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 SAV1Q9H4B6 383 aaPredicted RBP3.59□□□□□ -1.83
YBX3-210ENST00000540975 ZNF302Q9NR11 478 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 THUMPD1Q9NXG2 353 aaKnown RBP3.59□□□□□ -1.83
YBX3-210ENST00000540975 PDP1Q9P0J1 537 aaPredicted RBP3.59□□□□□ -1.83
YBX3-210ENST00000540975 CHRNA9Q9UGM1 479 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 RAB23Q9ULC3 237 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 MFHAS1Q9Y4C4 1052 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 OARD1Q9Y530 152 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 V9GYQ6 96 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 NRCAMQ92823 1304 aa3.59□□□□□ -1.83
YBX3-210ENST00000540975 QRICH2Q9H0J4 1663 aa3.59□□□□□ -1.84
YBX3-210ENST00000540975 IGKV2D-24A0A075B6R9 120 aa3.58□□□□□ -1.84
YBX3-210ENST00000540975 PVALEFA0A1B0GWK0 134 aa3.58□□□□□ -1.84
YBX3-210ENST00000540975 GNG14A0A1W2PPG7 69 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms