RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 TSPYL5Q86VY4 417 aaPredicted RBP10.51□□□□□ -0.73
COPS7A-211ENST00000540408 PARP8Q8N3A8 854 aa10.51□□□□□ -0.73
COPS7A-211ENST00000540408 TLCD1Q96CP7 247 aa10.51□□□□□ -0.73
COPS7A-211ENST00000540408 NMD3Q96D46 503 aaKnown RBP10.51□□□□□ -0.73
COPS7A-211ENST00000540408 C1orf147Q96MC9 270 aaPredicted RBP10.51□□□□□ -0.73
COPS7A-211ENST00000540408 ZNF48Q96MX3 618 aaPredicted RBP10.51□□□□□ -0.73
COPS7A-211ENST00000540408 TMBIM4Q9HC24 238 aa10.51□□□□□ -0.73
COPS7A-211ENST00000540408 C20orf141Q9NUB4 165 aa10.51□□□□□ -0.73
COPS7A-211ENST00000540408 TBCCD1Q9NVR7 557 aa10.51□□□□□ -0.73
COPS7A-211ENST00000540408 LRCH1Q9Y2L9 728 aa10.51□□□□□ -0.73
COPS7A-211ENST00000540408 ARHGAP32A7KAX9 2087 aa10.51□□□□□ -0.73
COPS7A-211ENST00000540408 IGKV1D-43A0A0B4J1Z2 117 aa10.5□□□□□ -0.73
COPS7A-211ENST00000540408 A6NIZ1 184 aa10.5□□□□□ -0.73
COPS7A-211ENST00000540408 GPANK1O95872 356 aa10.5□□□□□ -0.73
COPS7A-211ENST00000540408 IFNA14P01570 189 aa10.5□□□□□ -0.73
COPS7A-211ENST00000540408 CRYBA1P05813 215 aa10.5□□□□□ -0.73
COPS7A-211ENST00000540408 TSPAN19P0C672 248 aa10.5□□□□□ -0.73
COPS7A-211ENST00000540408 COX5BP10606 129 aa10.5□□□□□ -0.73
COPS7A-211ENST00000540408 MSR1P21757 451 aa10.5□□□□□ -0.73
COPS7A-211ENST00000540408 CTXN1P60606 82 aa10.5□□□□□ -0.73
COPS7A-211ENST00000540408 RAP1BP61224 184 aa10.5□□□□□ -0.73
COPS7A-211ENST00000540408 SEC61A1P61619 476 aaKnown RBP10.5□□□□□ -0.73
COPS7A-211ENST00000540408 RAP1AP62834 184 aa10.5□□□□□ -0.73
COPS7A-211ENST00000540408 SCRN3Q0VDG4 424 aa10.5□□□□□ -0.73
COPS7A-211ENST00000540408 PIN1Q13526 163 aaPredicted RBP10.5□□□□□ -0.73
COPS7A-211ENST00000540408 CYLC2Q14093 348 aaPredicted RBP10.5□□□□□ -0.73
COPS7A-211ENST00000540408 SELPLGQ14242 412 aa10.5□□□□□ -0.73
COPS7A-211ENST00000540408 ZMYND11Q15326 602 aa10.5□□□□□ -0.73
COPS7A-211ENST00000540408 VMACQ2NL98 169 aa10.5□□□□□ -0.73
COPS7A-211ENST00000540408 SLC27A4Q6P1M0 643 aa10.5□□□□□ -0.73
COPS7A-211ENST00000540408 SPATC1Q76KD6 591 aa10.5□□□□□ -0.73
COPS7A-211ENST00000540408 CCDC80Q76M96 950 aa10.5□□□□□ -0.73
COPS7A-211ENST00000540408 ATG16L2Q8NAA4 619 aa10.5□□□□□ -0.73
COPS7A-211ENST00000540408 TSPEARQ8WU66 669 aa10.5□□□□□ -0.73
COPS7A-211ENST00000540408 ZDHHC16Q969W1 377 aa10.5□□□□□ -0.73
COPS7A-211ENST00000540408 TMIGD2Q96BF3 282 aa10.5□□□□□ -0.73
COPS7A-211ENST00000540408 PLEKHA8Q96JA3 519 aa10.5□□□□□ -0.73
COPS7A-211ENST00000540408 SH3GL1Q99961 368 aa10.5□□□□□ -0.73
COPS7A-211ENST00000540408 SSBP3Q9BWW4 388 aaPredicted RBP10.5□□□□□ -0.73
COPS7A-211ENST00000540408 DCAF16Q9NXF7 216 aa10.5□□□□□ -0.73
COPS7A-211ENST00000540408 MIOXQ9UGB7 285 aa10.5□□□□□ -0.73
COPS7A-211ENST00000540408 HIF3AQ9Y2N7 669 aa10.5□□□□□ -0.73
COPS7A-211ENST00000540408 F5H0A9 414 aaPredicted RBP10.49□□□□□ -0.73
COPS7A-211ENST00000540408 TMEM178BH3BS89 294 aa10.49□□□□□ -0.73
COPS7A-211ENST00000540408 RPS2P15880 293 aaKnown RBP10.49□□□□□ -0.73
COPS7A-211ENST00000540408 KITLGP21583 273 aa10.49□□□□□ -0.73
COPS7A-211ENST00000540408 CD80P33681 288 aa10.49□□□□□ -0.73
COPS7A-211ENST00000540408 GNB2P62879 340 aa10.49□□□□□ -0.73
COPS7A-211ENST00000540408 GUCY1A3Q02108 690 aa10.49□□□□□ -0.73
COPS7A-211ENST00000540408 ST3GAL3Q11203 375 aa10.49□□□□□ -0.73
COPS7A-211ENST00000540408 ZNF362Q5T0B9 420 aaPredicted RBP10.49□□□□□ -0.73
COPS7A-211ENST00000540408 C17orf107Q6ZR85 190 aa10.49□□□□□ -0.73
COPS7A-211ENST00000540408 C9orf139Q6ZV77 190 aa10.49□□□□□ -0.73
COPS7A-211ENST00000540408 ITLN1Q8WWA0 313 aa10.49□□□□□ -0.73
COPS7A-211ENST00000540408 DYDC1Q8WWB3 177 aa10.49□□□□□ -0.73
COPS7A-211ENST00000540408 PTP4A1Q93096 173 aa10.49□□□□□ -0.73
COPS7A-211ENST00000540408 CMBLQ96DG6 245 aa10.49□□□□□ -0.73
COPS7A-211ENST00000540408 BPIFA2Q96DR5 249 aa10.49□□□□□ -0.73
COPS7A-211ENST00000540408 OR2V2Q96R30 315 aa10.49□□□□□ -0.73
COPS7A-211ENST00000540408 ECSITQ9BQ95 431 aa10.49□□□□□ -0.73
COPS7A-211ENST00000540408 MMP24Q9Y5R2 645 aa10.49□□□□□ -0.73
COPS7A-211ENST00000540408 IGHV3OR16-10A0A075B7F0 116 aa10.48□□□□□ -0.73
COPS7A-211ENST00000540408 LRRC30A6NM36 301 aa10.48□□□□□ -0.73
COPS7A-211ENST00000540408 CEACAM18A8MTB9 384 aa10.48□□□□□ -0.73
COPS7A-211ENST00000540408 SGCEO43556 437 aa10.48□□□□□ -0.73
COPS7A-211ENST00000540408 DOK2O60496 412 aa10.48□□□□□ -0.73
COPS7A-211ENST00000540408 SHOX2O60902 331 aaPredicted RBP10.48□□□□□ -0.73
COPS7A-211ENST00000540408 KNG1P01042 644 aa10.48□□□□□ -0.73
COPS7A-211ENST00000540408 WNT2P09544 360 aa10.48□□□□□ -0.73
COPS7A-211ENST00000540408 IFI30P13284 250 aa10.48□□□□□ -0.73
COPS7A-211ENST00000540408 MDKP21741 143 aaPredicted RBP10.48□□□□□ -0.73
COPS7A-211ENST00000540408 HTR5AP47898 357 aa10.48□□□□□ -0.73
COPS7A-211ENST00000540408 SRP9P49458 86 aaKnown RBP10.48□□□□□ -0.73
COPS7A-211ENST00000540408 ENDOGQ14249 297 aaKnown RBP10.48□□□□□ -0.73
COPS7A-211ENST00000540408 OCLNQ16625 522 aa10.48□□□□□ -0.73
COPS7A-211ENST00000540408 ANKDD1AQ495B1 522 aa10.48□□□□□ -0.73
COPS7A-211ENST00000540408 FOXL2NBQ6ZUU3 175 aa10.48□□□□□ -0.73
COPS7A-211ENST00000540408 NLRC3Q7RTR2 1065 aa10.48□□□□□ -0.73
COPS7A-211ENST00000540408 CLDN22Q8N7P3 220 aa10.48□□□□□ -0.73
COPS7A-211ENST00000540408 OR5L1Q8NGL2 311 aa10.48□□□□□ -0.73
COPS7A-211ENST00000540408 RAB40AQ8WXH6 277 aa10.48□□□□□ -0.73
COPS7A-211ENST00000540408 UPRTQ96BW1 309 aa10.48□□□□□ -0.73
COPS7A-211ENST00000540408 HAVCR1Q96D42 359 aa10.48□□□□□ -0.73
COPS7A-211ENST00000540408 SIGLEC11Q96RL6 698 aa10.48□□□□□ -0.73
COPS7A-211ENST00000540408 BEX1Q9HBH7 125 aa10.48□□□□□ -0.73
COPS7A-211ENST00000540408 GCM1Q9NP62 436 aa10.48□□□□□ -0.73
COPS7A-211ENST00000540408 POLE4Q9NR33 117 aa10.48□□□□□ -0.73
COPS7A-211ENST00000540408 TANC2Q9HCD6 1990 aa10.48□□□□□ -0.73
COPS7A-211ENST00000540408 IGHV2-70DA0A0C4DH43 119 aa10.47□□□□□ -0.73
COPS7A-211ENST00000540408 A0A0G2JK05 382 aa10.47□□□□□ -0.73
COPS7A-211ENST00000540408 HOXA3O43365 443 aaPredicted RBP10.47□□□□□ -0.73
COPS7A-211ENST00000540408 IGHV4-38-2P0DP08 117 aa10.47□□□□□ -0.73
COPS7A-211ENST00000540408 RAC2P15153 192 aa10.47□□□□□ -0.73
COPS7A-211ENST00000540408 TNFRSF1BP20333 461 aa10.47□□□□□ -0.73
COPS7A-211ENST00000540408 OMGP23515 440 aa10.47□□□□□ -0.73
COPS7A-211ENST00000540408 OR1E2P47887 323 aa10.47□□□□□ -0.73
COPS7A-211ENST00000540408 BPIFB3P59826 476 aa10.47□□□□□ -0.73
COPS7A-211ENST00000540408 TTMPQ5BVD1 217 aa10.47□□□□□ -0.73
COPS7A-211ENST00000540408 NANOGP8Q6NSW7 305 aa10.47□□□□□ -0.73
COPS7A-211ENST00000540408 C1orf94Q6P1W5 598 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms