RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 MAGEL2Q9UJ55 1249 aa14.27□□□□□ -0.13
DDB1-215ENST00000539712 COA3Q9Y2R0 106 aaPredicted RBP14.27□□□□□ -0.13
DDB1-215ENST00000539712 ZSCAN5BA6NJL1 495 aa14.26□□□□□ -0.13
DDB1-215ENST00000539712 DCTN6O00399 190 aa14.26□□□□□ -0.13
DDB1-215ENST00000539712 SOCS2O14508 198 aa14.26□□□□□ -0.13
DDB1-215ENST00000539712 PPIHO43447 177 aaKnown RBP14.26□□□□□ -0.13
DDB1-215ENST00000539712 SLC16A7O60669 478 aa14.26□□□□□ -0.13
DDB1-215ENST00000539712 IGHV1-46P01743 117 aa14.26□□□□□ -0.13
DDB1-215ENST00000539712 COX5BP10606 129 aa14.26□□□□□ -0.13
DDB1-215ENST00000539712 ITGA2P17301 1181 aa14.26□□□□□ -0.13
DDB1-215ENST00000539712 SRD5A1P18405 259 aa14.26□□□□□ -0.13
DDB1-215ENST00000539712 KCNMB1Q16558 191 aa14.26□□□□□ -0.13
DDB1-215ENST00000539712 MOGQ16653 247 aa14.26□□□□□ -0.13
DDB1-215ENST00000539712 SPRNQ5BIV9 151 aa14.26□□□□□ -0.13
DDB1-215ENST00000539712 SMARCD3Q6STE5 483 aa14.26□□□□□ -0.13
DDB1-215ENST00000539712 VASH1Q7L8A9 365 aaPredicted RBP14.26□□□□□ -0.13
DDB1-215ENST00000539712 GLB1L2Q8IW92 636 aa14.26□□□□□ -0.13
DDB1-215ENST00000539712 PHC2Q8IXK0 858 aa14.26□□□□□ -0.13
DDB1-215ENST00000539712 SNX33Q8WV41 574 aa14.26□□□□□ -0.13
DDB1-215ENST00000539712 TSSK2Q96PF2 358 aa14.26□□□□□ -0.13
DDB1-215ENST00000539712 NARFLQ9H6Q4 476 aa14.26□□□□□ -0.13
DDB1-215ENST00000539712 IL1RAPQ9NPH3 570 aa14.26□□□□□ -0.13
DDB1-215ENST00000539712 TREM2Q9NZC2 230 aa14.26□□□□□ -0.13
DDB1-215ENST00000539712 OR6C6A6NF89 314 aa14.25□□□□□ -0.13
DDB1-215ENST00000539712 RNF212BA8MTL3 300 aa14.25□□□□□ -0.13
DDB1-215ENST00000539712 GMNNO75496 209 aa14.25□□□□□ -0.13
DDB1-215ENST00000539712 KHDRBS3O75525 346 aaKnown RBP14.25□□□□□ -0.13
DDB1-215ENST00000539712 GPANK1O95872 356 aa14.25□□□□□ -0.13
DDB1-215ENST00000539712 ADH4P08319 380 aa14.25□□□□□ -0.13
DDB1-215ENST00000539712 ZNF81P51508 661 aa14.25□□□□□ -0.13
DDB1-215ENST00000539712 DVL1P1P54792 670 aaPredicted RBP14.25□□□□□ -0.13
DDB1-215ENST00000539712 LSM6P62312 80 aaKnown RBP14.25□□□□□ -0.13
DDB1-215ENST00000539712 PSG7Q13046 419 aa14.25□□□□□ -0.13
DDB1-215ENST00000539712 KRT72Q14CN4 511 aa14.25□□□□□ -0.13
DDB1-215ENST00000539712 TSTQ16762 297 aaKnown RBP14.25□□□□□ -0.13
DDB1-215ENST00000539712 RFX4Q33E94 735 aa14.25□□□□□ -0.13
DDB1-215ENST00000539712 CCDC92Q53HC0 331 aaPredicted RBP14.25□□□□□ -0.13
DDB1-215ENST00000539712 ADCK1Q86TW2 530 aa14.25□□□□□ -0.13
DDB1-215ENST00000539712 C1orf174Q8IYL3 243 aa14.25□□□□□ -0.13
DDB1-215ENST00000539712 DEFB107AQ8IZN7 70 aa14.25□□□□□ -0.13
DDB1-215ENST00000539712 FITM2Q8N6M3 262 aa14.25□□□□□ -0.13
DDB1-215ENST00000539712 SLC7A6Q92536 515 aa14.25□□□□□ -0.13
DDB1-215ENST00000539712 NSMCE2Q96MF7 247 aa14.25□□□□□ -0.13
DDB1-215ENST00000539712 TBCCD1Q9NVR7 557 aa14.25□□□□□ -0.13
DDB1-215ENST00000539712 TMEFF2Q9UIK5 374 aaPredicted RBP14.25□□□□□ -0.13
DDB1-215ENST00000539712 NDRG4Q9ULP0 352 aaKnown RBP14.25□□□□□ -0.13
DDB1-215ENST00000539712 AURKCQ9UQB9 309 aa14.25□□□□□ -0.13
DDB1-215ENST00000539712 IGLV1-36A0A0B4J1U3 117 aa14.24□□□□□ -0.13
DDB1-215ENST00000539712 IGHV1-69-2A0A0G2JMI3 117 aa14.24□□□□□ -0.13
DDB1-215ENST00000539712 B4DSR2 109 aa14.24□□□□□ -0.13
DDB1-215ENST00000539712 H3BSA7 217 aa14.24□□□□□ -0.13
DDB1-215ENST00000539712 SGCEO43556 437 aa14.24□□□□□ -0.13
DDB1-215ENST00000539712 SPRY3O43610 288 aa14.24□□□□□ -0.13
DDB1-215ENST00000539712 GADD45GO95257 159 aa14.24□□□□□ -0.13
DDB1-215ENST00000539712 PPP1R3DO95685 299 aa14.24□□□□□ -0.13
DDB1-215ENST00000539712 GAAP10253 952 aa14.24□□□□□ -0.13
DDB1-215ENST00000539712 FPR3P25089 353 aa14.24□□□□□ -0.13
DDB1-215ENST00000539712 GCH1P30793 250 aa14.24□□□□□ -0.13
DDB1-215ENST00000539712 GSSP48637 474 aa14.24□□□□□ -0.13
DDB1-215ENST00000539712 SMIM11AP58511 58 aa14.24□□□□□ -0.13
DDB1-215ENST00000539712 HIST1H3AP68431 136 aa14.24□□□□□ -0.13
DDB1-215ENST00000539712 SPIBQ01892 262 aa14.24□□□□□ -0.13
DDB1-215ENST00000539712 SCRN3Q0VDG4 424 aa14.24□□□□□ -0.13
DDB1-215ENST00000539712 HNRNPA0Q13151 305 aaKnown RBP14.24□□□□□ -0.13
DDB1-215ENST00000539712 SPATS1Q496A3 300 aa14.24□□□□□ -0.13
DDB1-215ENST00000539712 FAM209AQ5JX71 171 aa14.24□□□□□ -0.13
DDB1-215ENST00000539712 HIST2H3PS2Q5TEC6 136 aa14.24□□□□□ -0.13
DDB1-215ENST00000539712 UNQ6126/PRO20091Q6UXV3 157 aa14.24□□□□□ -0.13
DDB1-215ENST00000539712 USP51Q70EK9 711 aa14.24□□□□□ -0.13
DDB1-215ENST00000539712 HIST2H3AQ71DI3 136 aa14.24□□□□□ -0.13
DDB1-215ENST00000539712 NDEL1Q9GZM8 345 aa14.24□□□□□ -0.13
DDB1-215ENST00000539712 RERGLQ9H628 205 aa14.24□□□□□ -0.13
DDB1-215ENST00000539712 ELOVL3Q9HB03 270 aa14.24□□□□□ -0.13
DDB1-215ENST00000539712 ASH2LQ9UBL3 628 aa14.24□□□□□ -0.13
DDB1-215ENST00000539712 STARD10Q9Y365 291 aa14.24□□□□□ -0.13
DDB1-215ENST00000539712 ARPC3O15145 178 aa14.23□□□□□ -0.13
DDB1-215ENST00000539712 RER1O15258 196 aa14.23□□□□□ -0.13
DDB1-215ENST00000539712 DOK2O60496 412 aa14.23□□□□□ -0.13
DDB1-215ENST00000539712 DCTN3O75935 186 aa14.23□□□□□ -0.13
DDB1-215ENST00000539712 UBOX5O94941 541 aa14.23□□□□□ -0.13
DDB1-215ENST00000539712 ATP6V1B2P21281 511 aa14.23□□□□□ -0.13
DDB1-215ENST00000539712 RRM2P31350 389 aa14.23□□□□□ -0.13
DDB1-215ENST00000539712 HTR5AP47898 357 aa14.23□□□□□ -0.13
DDB1-215ENST00000539712 RPS6KA3P51812 740 aa14.23□□□□□ -0.13
DDB1-215ENST00000539712 HMGA2P52926 109 aa14.23□□□□□ -0.13
DDB1-215ENST00000539712 SRSF2Q01130 221 aaKnown RBP14.23□□□□□ -0.13
DDB1-215ENST00000539712 AQP6Q13520 282 aa14.23□□□□□ -0.13
DDB1-215ENST00000539712 RSPO1Q2MKA7 263 aaPredicted RBP14.23□□□□□ -0.13
DDB1-215ENST00000539712 KRTAP24-1Q3LI83 254 aa14.23□□□□□ -0.13
DDB1-215ENST00000539712 AVPI1Q5T686 147 aa14.23□□□□□ -0.13
DDB1-215ENST00000539712 C1orf94Q6P1W5 598 aa14.23□□□□□ -0.13
DDB1-215ENST00000539712 OR6V1Q8N148 313 aa14.23□□□□□ -0.13
DDB1-215ENST00000539712 ERMAPQ96PL5 475 aaPredicted RBP14.23□□□□□ -0.13
DDB1-215ENST00000539712 CCT8L2Q96SF2 557 aa14.23□□□□□ -0.13
DDB1-215ENST00000539712 OR52D1Q9H346 318 aa14.23□□□□□ -0.13
DDB1-215ENST00000539712 MSL2Q9HCI7 577 aa14.23□□□□□ -0.13
DDB1-215ENST00000539712 DECR2Q9NUI1 292 aa14.23□□□□□ -0.13
DDB1-215ENST00000539712 B9D1Q9UPM9 204 aa14.23□□□□□ -0.13
DDB1-215ENST00000539712 LHFPL6Q9Y693 200 aa14.23□□□□□ -0.13
DDB1-215ENST00000539712 DEAF1O75398 565 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms