RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 EEF1A1P5Q5VTE0 462 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 RTL6Q6ICC9 239 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 PODNL1Q6PEZ8 512 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 SHQ1Q6PI26 577 aaKnown RBP3.81□□□□□ -1.8
SNHG1-208ENST00000538266 WDR88Q6ZMY6 472 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 MBOAT2Q6ZWT7 520 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 H1FNTQ75WM6 255 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-208ENST00000538266 HDDC2Q7Z4H3 204 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 TSEN54Q7Z6J9 526 aaKnown RBP3.81□□□□□ -1.8
SNHG1-208ENST00000538266 OAFQ86UD1 273 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 NKAIN4Q8IVV8 208 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 IZUMO1Q8IYV9 350 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 CADM3Q8N126 398 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 LINC00471Q8N535 108 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 KBTBD8Q8NFY9 601 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 OR5J2Q8NH18 312 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 OR6S1Q8NH40 331 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 PFN4Q8NHR9 129 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 MBD3L2Q8NHZ7 208 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-208ENST00000538266 NDNFQ8TB73 568 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 SLC7A13Q8TCU3 470 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 DYNC2LI1Q8TCX1 351 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 CA5BP1Q8WTZ4 195 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 TMEM171Q8WVE6 324 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 TAAR8Q969N4 342 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 INTS12Q96CB8 462 aaKnown RBP3.81□□□□□ -1.8
SNHG1-208ENST00000538266 BPIFA2Q96DR5 249 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 LRRC46Q96FV0 321 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 GMPPAQ96IJ6 420 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-208ENST00000538266 ADGRG7Q96K78 797 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 PRSS27Q9BQR3 290 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 SFXN3Q9BWM7 321 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 SRXN1Q9BYN0 137 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 KRTAP4-11Q9BYQ6 195 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 RIBC2Q9H4K1 309 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 RNF122Q9H9V4 155 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 ZNF556Q9HAH1 456 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 MOV10Q9HCE1 1003 aaKnown RBP3.81□□□□□ -1.8
SNHG1-208ENST00000538266 CHST11Q9NPF2 352 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 MEPEQ9NQ76 525 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-208ENST00000538266 MAN2C1Q9NTJ4 1040 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 C20orf141Q9NUB4 165 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 SERTAD4Q9NUC0 356 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 MRPL39Q9NYK5 338 aaKnown RBP3.81□□□□□ -1.8
SNHG1-208ENST00000538266 CCDC59Q9P031 241 aaKnown RBP3.81□□□□□ -1.8
SNHG1-208ENST00000538266 KIF17Q9P2E2 1029 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 KLHL13Q9P2N7 655 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 ERRFI1Q9UJM3 462 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-208ENST00000538266 RASD1Q9Y272 281 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 FAM215AQ9Y5M1 114 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 LYVE1Q9Y5Y7 322 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 A3GALT2U3KPV4 340 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 DSPP15924 2871 aaKnown RBP3.81□□□□□ -1.8
SNHG1-208ENST00000538266 LOC400499M0QZD8 3231 aa3.81□□□□□ -1.8
SNHG1-208ENST00000538266 MED12Q93074 2177 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 GTF3C1Q12789 2109 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 ZGRF1Q86YA3 2104 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 CFAP47Q6ZTR5 3102 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 IGKV3D-15A0A087WSY6 115 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 A0A1W2PNV4 684 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 A0A1W2PRG6 482 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 ARRDC5A6NEK1 342 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 ZAR1LA6NP61 321 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 LINC00473A8K010 186 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 ZNF724A8MTY0 619 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 FTCDNL1E5RQL4 147 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 C11orf98E9PRG8 122 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 PLPP3O14495 311 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 CYTIPO60759 359 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 ZG16O60844 167 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 SS18L1O75177 396 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-208ENST00000538266 MRPL33O75394 65 aaKnown RBP3.8□□□□□ -1.8
SNHG1-208ENST00000538266 UPK1BO75841 260 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 KRT33AO76009 404 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 OR7A10O76100 309 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 NXPH3O95157 252 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 RCBTB2O95199 551 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 LYPD3O95274 346 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 FADS2O95864 444 aaKnown RBP3.8□□□□□ -1.8
SNHG1-208ENST00000538266 NUDT3O95989 172 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 BGLAPP02818 100 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 MT-ND2P03891 347 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 ANXA2P07355 339 aaKnown RBP3.8□□□□□ -1.8
SNHG1-208ENST00000538266 YES1P07947 543 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 IL6RP08887 468 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-208ENST00000538266 ASAH2BP0C7U1 165 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 NR2C1P13056 603 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 NDUFB7P17568 137 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 FUT1P19526 365 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 GSTM3P21266 225 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 FPR3P25089 353 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 AGTR1P30556 359 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 CHRNB4P30926 498 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 FMO3P31513 532 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 RPL4P36578 427 aaKnown RBP3.8□□□□□ -1.8
SNHG1-208ENST00000538266 GSSP48637 474 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 SLC9A3P48764 834 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 PTH2RP49190 550 aa3.8□□□□□ -1.8
SNHG1-208ENST00000538266 DAP3P51398 398 aaKnown RBP3.8□□□□□ -1.8
SNHG1-208ENST00000538266 PPP5CP53041 499 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms