RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 MST1LQ2TV78 715 aa11.3□□□□□ -0.6
CHFR-216ENST00000538235 C11orf71Q6IPW1 123 aa11.3□□□□□ -0.6
CHFR-216ENST00000538235 RFPL4BQ6ZWI9 263 aa11.3□□□□□ -0.6
CHFR-216ENST00000538235 PROKR2Q8NFJ6 384 aa11.3□□□□□ -0.6
CHFR-216ENST00000538235 ZMYND19Q96E35 227 aaPredicted RBP11.3□□□□□ -0.6
CHFR-216ENST00000538235 PITX2Q99697 317 aa11.3□□□□□ -0.6
CHFR-216ENST00000538235 RBM4BQ9BQ04 359 aaKnown RBP11.3□□□□□ -0.6
CHFR-216ENST00000538235 GRIP2Q9C0E4 1043 aa11.3□□□□□ -0.6
CHFR-216ENST00000538235 OR51B6Q9H340 312 aa11.3□□□□□ -0.6
CHFR-216ENST00000538235 MARCH7Q9H992 704 aa11.3□□□□□ -0.6
CHFR-216ENST00000538235 MYEF2Q9P2K5 600 aaKnown RBP11.3□□□□□ -0.6
CHFR-216ENST00000538235 ST6GALNAC2Q9UJ37 374 aa11.3□□□□□ -0.6
CHFR-216ENST00000538235 CELSR1Q9NYQ6 3014 aa11.3□□□□□ -0.6
CHFR-216ENST00000538235 OR6C6A6NF89 314 aa11.29□□□□□ -0.6
CHFR-216ENST00000538235 CASQ2O14958 399 aaPredicted RBP11.29□□□□□ -0.6
CHFR-216ENST00000538235 FARS2O95363 451 aaKnown RBP11.29□□□□□ -0.6
CHFR-216ENST00000538235 RAB36O95755 333 aa11.29□□□□□ -0.6
CHFR-216ENST00000538235 ZNF3P17036 446 aa11.29□□□□□ -0.6
CHFR-216ENST00000538235 CRABP1P29762 137 aa11.29□□□□□ -0.6
CHFR-216ENST00000538235 LSM6P62312 80 aaKnown RBP11.29□□□□□ -0.6
CHFR-216ENST00000538235 AQP6Q13520 282 aa11.29□□□□□ -0.6
CHFR-216ENST00000538235 TRIP10Q15642 601 aa11.29□□□□□ -0.6
CHFR-216ENST00000538235 PCK2Q16822 640 aa11.29□□□□□ -0.6
CHFR-216ENST00000538235 KRTAP27-1Q3LI81 207 aa11.29□□□□□ -0.6
CHFR-216ENST00000538235 SLC36A2Q495M3 483 aa11.29□□□□□ -0.6
CHFR-216ENST00000538235 OGFRL1Q5TC84 451 aaPredicted RBP11.29□□□□□ -0.6
CHFR-216ENST00000538235 AADACL4Q5VUY2 407 aa11.29□□□□□ -0.6
CHFR-216ENST00000538235 FBXW10Q5XX13 1052 aa11.29□□□□□ -0.6
CHFR-216ENST00000538235 KRT80Q6KB66 452 aa11.29□□□□□ -0.6
CHFR-216ENST00000538235 SLC22A25Q6T423 547 aa11.29□□□□□ -0.6
CHFR-216ENST00000538235 CXXC5Q7LFL8 322 aaKnown RBP11.29□□□□□ -0.6
CHFR-216ENST00000538235 CDH24Q86UP0 819 aa11.29□□□□□ -0.6
CHFR-216ENST00000538235 TIGD4Q8IY51 512 aa11.29□□□□□ -0.6
CHFR-216ENST00000538235 CCDC36Q8IYA8 594 aa11.29□□□□□ -0.6
CHFR-216ENST00000538235 TCEANCQ8N8B7 351 aa11.29□□□□□ -0.6
CHFR-216ENST00000538235 SLC30A7Q8NEW0 376 aa11.29□□□□□ -0.6
CHFR-216ENST00000538235 TMEM171Q8WVE6 324 aa11.29□□□□□ -0.6
CHFR-216ENST00000538235 NANOS1Q8WY41 292 aaKnown RBP11.29□□□□□ -0.6
CHFR-216ENST00000538235 STMN2Q93045 179 aa11.29□□□□□ -0.6
CHFR-216ENST00000538235 RADILQ96JH8 1075 aa11.29□□□□□ -0.6
CHFR-216ENST00000538235 IL4I1Q96RQ9 567 aa11.29□□□□□ -0.6
CHFR-216ENST00000538235 OR51V1Q9H2C8 321 aa11.29□□□□□ -0.6
CHFR-216ENST00000538235 RNF121Q9H920 327 aa11.29□□□□□ -0.6
CHFR-216ENST00000538235 CYB5R1Q9UHQ9 305 aa11.29□□□□□ -0.6
CHFR-216ENST00000538235 ARID1AO14497 2285 aa11.29□□□□□ -0.6
CHFR-216ENST00000538235 TMEM129A0AVI4 362 aa11.28□□□□□ -0.6
CHFR-216ENST00000538235 DOK2O60496 412 aa11.28□□□□□ -0.6
CHFR-216ENST00000538235 NDUFS7O75251 213 aa11.28□□□□□ -0.6
CHFR-216ENST00000538235 NGFP01138 241 aa11.28□□□□□ -0.6
CHFR-216ENST00000538235 FAM157BP0CG42 384 aa11.28□□□□□ -0.6
CHFR-216ENST00000538235 GABRB1P18505 474 aa11.28□□□□□ -0.6
CHFR-216ENST00000538235 THBS4P35443 961 aa11.28□□□□□ -0.6
CHFR-216ENST00000538235 SNTB2Q13425 540 aaKnown RBP11.28□□□□□ -0.6
CHFR-216ENST00000538235 ADIPOQQ15848 244 aa11.28□□□□□ -0.6
CHFR-216ENST00000538235 SNAPC1Q16533 368 aa11.28□□□□□ -0.6
CHFR-216ENST00000538235 C1QTNF12Q5T7M4 302 aa11.28□□□□□ -0.6
CHFR-216ENST00000538235 DNM1P34Q6PK57 102 aa11.28□□□□□ -0.6
CHFR-216ENST00000538235 LRP11Q86VZ4 500 aa11.28□□□□□ -0.6
CHFR-216ENST00000538235 ZNF611Q8N823 705 aa11.28□□□□□ -0.6
CHFR-216ENST00000538235 OR6K6Q8NGW6 343 aa11.28□□□□□ -0.6
CHFR-216ENST00000538235 OR2T4Q8NH00 348 aa11.28□□□□□ -0.6
CHFR-216ENST00000538235 ST7LQ8TDW4 575 aa11.28□□□□□ -0.6
CHFR-216ENST00000538235 C9orf16Q9BUW7 83 aa11.28□□□□□ -0.6
CHFR-216ENST00000538235 CCNB1IP1Q9NPC3 277 aa11.28□□□□□ -0.6
CHFR-216ENST00000538235 NGBQ9NPG2 151 aa11.28□□□□□ -0.6
CHFR-216ENST00000538235 CISD1Q9NZ45 108 aaKnown RBP11.28□□□□□ -0.6
CHFR-216ENST00000538235 KCNG2Q9UJ96 466 aa11.28□□□□□ -0.6
CHFR-216ENST00000538235 GDF2Q9UK05 429 aaPredicted RBP11.28□□□□□ -0.6
CHFR-216ENST00000538235 FZR1Q9UM11 496 aa11.28□□□□□ -0.6
CHFR-216ENST00000538235 ATP23Q9Y6H3 246 aa11.28□□□□□ -0.6
CHFR-216ENST00000538235 TANC2Q9HCD6 1990 aa11.28□□□□□ -0.6
CHFR-216ENST00000538235 ITPR3Q14573 2671 aa11.28□□□□□ -0.6
CHFR-216ENST00000538235 CR1P17927 2039 aa11.27□□□□□ -0.61
CHFR-216ENST00000538235 PRR23D1E9PI22 279 aaPredicted RBP11.27□□□□□ -0.61
CHFR-216ENST00000538235 SGCEO43556 437 aa11.27□□□□□ -0.61
CHFR-216ENST00000538235 SMPD2O60906 423 aa11.27□□□□□ -0.61
CHFR-216ENST00000538235 GLCEO94923 617 aa11.27□□□□□ -0.61
CHFR-216ENST00000538235 CLIC3O95833 236 aa11.27□□□□□ -0.61
CHFR-216ENST00000538235 IFNGP01579 166 aa11.27□□□□□ -0.61
CHFR-216ENST00000538235 PRR23D2P0DMB1 279 aaPredicted RBP11.27□□□□□ -0.61
CHFR-216ENST00000538235 GSTT1P30711 240 aa11.27□□□□□ -0.61
CHFR-216ENST00000538235 NAA10P41227 235 aaPredicted RBP11.27□□□□□ -0.61
CHFR-216ENST00000538235 HCCSP53701 268 aa11.27□□□□□ -0.61
CHFR-216ENST00000538235 GLO1Q04760 184 aa11.27□□□□□ -0.61
CHFR-216ENST00000538235 HNRNPA0Q13151 305 aaKnown RBP11.27□□□□□ -0.61
CHFR-216ENST00000538235 RIPK1Q13546 671 aa11.27□□□□□ -0.61
CHFR-216ENST00000538235 APOFQ13790 326 aa11.27□□□□□ -0.61
CHFR-216ENST00000538235 TMEM53Q6P2H8 277 aa11.27□□□□□ -0.61
CHFR-216ENST00000538235 TMEM154Q6P9G4 183 aa11.27□□□□□ -0.61
CHFR-216ENST00000538235 VHLLQ6RSH7 139 aa11.27□□□□□ -0.61
CHFR-216ENST00000538235 ZBTB49Q6ZSB9 765 aa11.27□□□□□ -0.61
CHFR-216ENST00000538235 SSX8Q7RTT4 187 aa11.27□□□□□ -0.61
CHFR-216ENST00000538235 DTX2Q86UW9 622 aa11.27□□□□□ -0.61
CHFR-216ENST00000538235 GALNT4Q8N4A0 578 aa11.27□□□□□ -0.61
CHFR-216ENST00000538235 NUP37Q8NFH4 326 aa11.27□□□□□ -0.61
CHFR-216ENST00000538235 TMEM163Q8TC26 289 aa11.27□□□□□ -0.61
CHFR-216ENST00000538235 GTF3AQ92664 365 aaKnown RBP11.27□□□□□ -0.61
CHFR-216ENST00000538235 FBXW5Q969U6 566 aa11.27□□□□□ -0.61
CHFR-216ENST00000538235 EME1Q96AY2 570 aa11.27□□□□□ -0.61
CHFR-216ENST00000538235 OTULINQ96BN8 352 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms