RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 NDUFS1P28331 727 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 CEACAM6P40199 344 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 SLC11A1P49279 550 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 LIM2P55344 173 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 GUCA2AQ02747 115 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 SGCAQ16586 387 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 OR4C16Q8NGL9 310 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 OR6X1Q8NH79 312 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 RXFP4Q8TDU9 374 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 LYSMD1Q96S90 227 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 SLC7A11Q9UPY5 501 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 LEFTY2O00292 366 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 XRCC3O43542 346 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 LATO43561 262 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 NSA2O95478 260 aaKnown RBP4.93□□□□□ -1.62
PTPRD-213ENST00000537002 CXCL14O95715 111 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 FGF19O95750 216 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 F12P00748 615 aaPredicted RBP4.93□□□□□ -1.62
PTPRD-213ENST00000537002 LINC00614P0C842 121 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 PLPP4Q5VZY2 271 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 SSX7Q7RTT5 188 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 FJX1Q86VR8 437 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 OR9K2Q8NGE7 335 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF75AQ96N20 296 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 OR5B2Q96R09 309 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 TEAD3Q99594 435 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 SYT3Q9BQG1 590 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 STRAPQ9Y3F4 350 aaKnown RBP4.93□□□□□ -1.62
PTPRD-213ENST00000537002 MMP24Q9Y5R2 645 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 A0A1B0GV90 55 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 HIDE1A8MVS5 230 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 JTBO76095 146 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 F13BP05160 661 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 GPM6BQ13491 265 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 EXOSC7Q15024 291 aaKnown RBP4.93□□□□□ -1.62
PTPRD-213ENST00000537002 MRM1Q6IN84 353 aaKnown RBP4.93□□□□□ -1.62
PTPRD-213ENST00000537002 FAM71E1Q6IPT2 247 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 POC1BQ8TC44 478 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 HOXB13Q92826 284 aaPredicted RBP4.93□□□□□ -1.62
PTPRD-213ENST00000537002 SLC22A18Q96BI1 424 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 ARSGQ96EG1 525 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 DERL3Q96Q80 235 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 CGGBP1Q9UFW8 167 aaPredicted RBP4.93□□□□□ -1.62
PTPRD-213ENST00000537002 PCOLCE2Q9UKZ9 415 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 NINQ8N4C6 2090 aa4.93□□□□□ -1.62
PTPRD-213ENST00000537002 TMEM150CB9EJG8 249 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 HSBP1L1C9JCN9 74 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 DIRAS3O95661 229 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 GAPDHP04406 335 aaKnown RBP4.92□□□□□ -1.62
PTPRD-213ENST00000537002 RAB11AP62491 216 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 MFGE8Q08431 387 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-213ENST00000537002 PMPCAQ10713 525 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 TMEM35AQ53FP2 167 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 TSEN54Q7Z6J9 526 aaKnown RBP4.92□□□□□ -1.62
PTPRD-213ENST00000537002 TMEM123Q8N131 208 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 TMEM217Q8N7C4 229 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 ZDHHC22Q8N966 263 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 PPP1R1CQ8WVI7 109 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 C1orf198Q9H425 327 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 PDFQ9HBH1 243 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 CCDC88CQ9P219 2028 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 LOC100289279A0A1B0GTE1 492 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 ZFP92A6NM28 416 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 TMEM225BP0DP42 221 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 THBS2P35442 1172 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 PDX1P52945 283 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 CDK3Q00526 305 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 RFLNAQ6ZTI6 216 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 MUC20Q8N307 709 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF511Q8NB15 262 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 KLHDC9Q8NEP7 349 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 ISOC2Q96AB3 205 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 MYADMQ96S97 322 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 BARX1Q9HBU1 254 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-213ENST00000537002 C1orf123Q9NWV4 160 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 A0A087WUU8 490 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 GFYI3L273 518 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 EOMESO95936 686 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 METTL15P1P0C7V9 234 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 ATF1P18846 271 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 PSMB6P28072 239 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 PFN3P60673 137 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 ALKBH1Q13686 389 aaKnown RBP4.92□□□□□ -1.62
PTPRD-213ENST00000537002 HABP2Q14520 560 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-213ENST00000537002 ARL6IP1Q15041 203 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 CCSMST1Q4G0I0 132 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 SLC35D3Q5M8T2 416 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 MORN1Q5T089 497 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 DMKNQ6E0U4 476 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-213ENST00000537002 FBXW12Q6X9E4 464 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 OR56B2PQ8NGI1 322 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 ALG12Q9BV10 488 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 SELENOIQ9C0D9 397 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 SLC25A31Q9H0C2 315 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 SERTAD4Q9NUC0 356 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 PCDHGA5Q9Y5G8 931 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 TIMM10BQ9Y5J6 103 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 WNT6Q9Y6F9 365 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 C9orf170A2RU37 121 aa4.92□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF840PA6NDX5 716 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms