RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 DYNLRB1Q9NP97 96 aa10.65□□□□□ -0.7
PRKDC-207ENST00000536483 TUBG2Q9NRH3 451 aa10.65□□□□□ -0.7
PRKDC-207ENST00000536483 AURKCQ9UQB9 309 aa10.65□□□□□ -0.7
PRKDC-207ENST00000536483 LOC100509620A0A075B734 347 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 C12orf71A8MTZ7 269 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 H3BSA7 217 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 M0R233 179 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 ACOT8O14734 319 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 IGHV3-13P01766 116 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 SCG5P05408 212 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 ADRA2AP08913 450 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 CTLA4P16410 223 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 HOXB6P17509 224 aaKnown RBP10.64□□□□□ -0.71
PRKDC-207ENST00000536483 RRM2P31350 389 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 APLNRP35414 380 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 RPS6KA3P51812 740 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 CDH15P55291 814 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 MXRA7P84157 204 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 SPIBQ01892 262 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 HSF2Q03933 536 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 TRAP1Q12931 704 aaKnown RBP10.64□□□□□ -0.71
PRKDC-207ENST00000536483 KRR1Q13601 381 aaKnown RBP10.64□□□□□ -0.71
PRKDC-207ENST00000536483 RIN1Q13671 783 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 CCNIQ14094 377 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 RGS7BPQ6MZT1 257 aaPredicted RBP10.64□□□□□ -0.71
PRKDC-207ENST00000536483 UNQ6126/PRO20091Q6UXV3 157 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 RINLQ6ZS11 566 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 LRP11Q86VZ4 500 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 DHFR2Q86XF0 187 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 ALDH16A1Q8IZ83 802 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 OR4C15Q8NGM1 316 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 ASB9Q96DX5 294 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 ZNF416Q9BWM5 594 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 OR52D1Q9H346 318 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 TPK1Q9H3S4 243 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 CDH20Q9HBT6 801 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 CCNB1IP1Q9NPC3 277 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 SLCO1C1Q9NYB5 712 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 NKIRAS2Q9NYR9 191 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 IL20Q9NYY1 176 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 REV1Q9UBZ9 1251 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 ATPIF1Q9UII2 106 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 TMCC3Q9ULS5 477 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 IER3IP1Q9Y5U9 82 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 LYVE1Q9Y5Y7 322 aa10.64□□□□□ -0.71
PRKDC-207ENST00000536483 OR10H3O60404 316 aa10.63□□□□□ -0.71
PRKDC-207ENST00000536483 KHDRBS3O75525 346 aaKnown RBP10.63□□□□□ -0.71
PRKDC-207ENST00000536483 SLC6A6P31641 620 aa10.63□□□□□ -0.71
PRKDC-207ENST00000536483 WNT5AP41221 380 aa10.63□□□□□ -0.71
PRKDC-207ENST00000536483 CDKN2AP42771 156 aaKnown RBP10.63□□□□□ -0.71
PRKDC-207ENST00000536483 HIST1H3AP68431 136 aa10.63□□□□□ -0.71
PRKDC-207ENST00000536483 MOGQ16653 247 aa10.63□□□□□ -0.71
PRKDC-207ENST00000536483 HIST2H3PS2Q5TEC6 136 aa10.63□□□□□ -0.71
PRKDC-207ENST00000536483 MBNL2Q5VZF2 373 aaKnown RBP10.63□□□□□ -0.71
PRKDC-207ENST00000536483 RPL13AP3Q6NVV1 102 aa10.63□□□□□ -0.71
PRKDC-207ENST00000536483 PGBD2Q6P3X8 592 aa10.63□□□□□ -0.71
PRKDC-207ENST00000536483 PGM2L1Q6PCE3 622 aa10.63□□□□□ -0.71
PRKDC-207ENST00000536483 CYP2R1Q6VVX0 501 aa10.63□□□□□ -0.71
PRKDC-207ENST00000536483 PTCHD4Q6ZW05 846 aa10.63□□□□□ -0.71
PRKDC-207ENST00000536483 HIST2H3AQ71DI3 136 aa10.63□□□□□ -0.71
PRKDC-207ENST00000536483 GLB1L2Q8IW92 636 aa10.63□□□□□ -0.71
PRKDC-207ENST00000536483 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.63□□□□□ -0.71
PRKDC-207ENST00000536483 SYNPRQ8TBG9 265 aa10.63□□□□□ -0.71
PRKDC-207ENST00000536483 GNPDA2Q8TDQ7 276 aa10.63□□□□□ -0.71
PRKDC-207ENST00000536483 C11orf40Q8WZ69 217 aa10.63□□□□□ -0.71
PRKDC-207ENST00000536483 RASD2Q96D21 266 aa10.63□□□□□ -0.71
PRKDC-207ENST00000536483 MARS2Q96GW9 593 aaKnown RBP10.63□□□□□ -0.71
PRKDC-207ENST00000536483 DDOQ99489 341 aa10.63□□□□□ -0.71
PRKDC-207ENST00000536483 NUAK2Q9H093 628 aa10.63□□□□□ -0.71
PRKDC-207ENST00000536483 TBCCD1Q9NVR7 557 aa10.63□□□□□ -0.71
PRKDC-207ENST00000536483 GPR160Q9UJ42 338 aa10.63□□□□□ -0.71
PRKDC-207ENST00000536483 NDRG4Q9ULP0 352 aaKnown RBP10.63□□□□□ -0.71
PRKDC-207ENST00000536483 V9GYQ6 96 aa10.63□□□□□ -0.71
PRKDC-207ENST00000536483 IGLV1-36A0A0B4J1U3 117 aa10.62□□□□□ -0.71
PRKDC-207ENST00000536483 H7C1C5 153 aa10.62□□□□□ -0.71
PRKDC-207ENST00000536483 J3QW42 95 aa10.62□□□□□ -0.71
PRKDC-207ENST00000536483 FKBP6O75344 327 aa10.62□□□□□ -0.71
PRKDC-207ENST00000536483 ADH4P08319 380 aa10.62□□□□□ -0.71
PRKDC-207ENST00000536483 CCL2P13500 99 aa10.62□□□□□ -0.71
PRKDC-207ENST00000536483 CRABP1P29762 137 aa10.62□□□□□ -0.71
PRKDC-207ENST00000536483 GDI2P50395 445 aaKnown RBP10.62□□□□□ -0.71
PRKDC-207ENST00000536483 DVL1P1P54792 670 aaPredicted RBP10.62□□□□□ -0.71
PRKDC-207ENST00000536483 KLF3P57682 345 aaPredicted RBP10.62□□□□□ -0.71
PRKDC-207ENST00000536483 SELENOVP59797 346 aa10.62□□□□□ -0.71
PRKDC-207ENST00000536483 LCN6P62502 163 aa10.62□□□□□ -0.71
PRKDC-207ENST00000536483 SCRN3Q0VDG4 424 aa10.62□□□□□ -0.71
PRKDC-207ENST00000536483 AQP6Q13520 282 aa10.62□□□□□ -0.71
PRKDC-207ENST00000536483 PCGF3Q3KNV8 242 aa10.62□□□□□ -0.71
PRKDC-207ENST00000536483 UGT2A3Q6UWM9 527 aa10.62□□□□□ -0.71
PRKDC-207ENST00000536483 ZNF620Q6ZNG0 422 aa10.62□□□□□ -0.71
PRKDC-207ENST00000536483 ZBTB46Q86UZ6 589 aa10.62□□□□□ -0.71
PRKDC-207ENST00000536483 ZNF101Q8IZC7 436 aa10.62□□□□□ -0.71
PRKDC-207ENST00000536483 AKR7LQ8NHP1 331 aa10.62□□□□□ -0.71
PRKDC-207ENST00000536483 IPCEF1Q8WWN9 437 aaPredicted RBP10.62□□□□□ -0.71
PRKDC-207ENST00000536483 DGCR6LQ9BY27 220 aa10.62□□□□□ -0.71
PRKDC-207ENST00000536483 RACGAP1Q9H0H5 632 aa10.62□□□□□ -0.71
PRKDC-207ENST00000536483 SYT4Q9H2B2 425 aa10.62□□□□□ -0.71
PRKDC-207ENST00000536483 OCEL1Q9H607 264 aa10.62□□□□□ -0.71
PRKDC-207ENST00000536483 MYEF2Q9P2K5 600 aaKnown RBP10.62□□□□□ -0.71
PRKDC-207ENST00000536483 KLHL21Q9UJP4 597 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms