RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 PGAM5Q96HS1 289 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 FCRL2Q96LA5 508 aaPredicted RBP3.36□□□□□ -1.87
MCF2-210ENST00000536274 TAAR9Q96RI9 348 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 S100A13Q99584 98 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 C1QTNF3Q9BXJ4 246 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 SLC12A9Q9BXP2 914 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 ACTRT3Q9BYD9 372 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 NELFAQ9H3P2 528 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 ZNF703Q9H7S9 590 aaPredicted RBP3.36□□□□□ -1.87
MCF2-210ENST00000536274 MIEF1Q9NQG6 463 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.36□□□□□ -1.87
MCF2-210ENST00000536274 UBQLN4Q9NRR5 601 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 LPAR3Q9UBY5 353 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 KCND3Q9UK17 655 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 EXOSC1Q9Y3B2 195 aaKnown RBP3.36□□□□□ -1.87
MCF2-210ENST00000536274 TDRD15B5MCY1 1934 aaKnown RBP3.36□□□□□ -1.87
MCF2-210ENST00000536274 PLXND1Q9Y4D7 1925 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 A0A1B0GTH9 108 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 CDHR4A6H8M9 788 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 K7EPK0 472 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 SCGB1D1O95968 90 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 HLA-AP01891 365 aaKnown RBP3.36□□□□□ -1.87
MCF2-210ENST00000536274 CD14P08571 375 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 ALPPL2P10696 532 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 ARF4P18085 180 aaPredicted RBP3.36□□□□□ -1.87
MCF2-210ENST00000536274 TBPP20226 339 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 CD22P20273 847 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 ASCL1P50553 236 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 HMGA2P52926 109 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 PDX1P52945 283 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 UBE2KP61086 200 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 CDC42EP1Q00587 391 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 PAX5Q02548 391 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 TCF15Q12870 199 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 GPM6BQ13491 265 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 P2RY6Q15077 328 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 ELOBQ15370 118 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 TMEM95Q3KNT9 176 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 ZNF260Q3ZCT1 412 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 SLC22A6Q4U2R8 563 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 MIDNQ504T8 468 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 HENMT1Q5T8I9 393 aaKnown RBP3.36□□□□□ -1.87
MCF2-210ENST00000536274 CPTPQ5TA50 214 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 LCTLQ6UWM7 567 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 LINGO4Q6UY18 593 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 SSX7Q7RTT5 188 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 RTN4RL2Q86UN3 420 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 ZBTB8OSQ8IWT0 167 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 GALNT16Q8N428 558 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 NKAPQ8N5F7 415 aaKnown RBP3.36□□□□□ -1.87
MCF2-210ENST00000536274 FAM71E2Q8N5Q1 922 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 SLC35G3Q8N808 338 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 OR4S1Q8NGB4 309 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 OR4C6Q8NH72 309 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 NINJ1Q92982 152 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 TSLPQ969D9 159 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 FUBP3Q96I24 572 aaKnown RBP eCLIP3.36□□□□□ -1.87
MCF2-210ENST00000536274 POTEKPQ9BYX7 375 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 SLC25A51Q9H1U9 297 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 APMAPQ9HDC9 416 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 NOX4Q9NPH5 578 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.36□□□□□ -1.87
MCF2-210ENST00000536274 ADAM18Q9Y3Q7 739 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 CHTOPQ9Y3Y2 248 aaKnown RBP3.36□□□□□ -1.87
MCF2-210ENST00000536274 MTCL1Q9Y4B5 1905 aaKnown RBP3.36□□□□□ -1.87
MCF2-210ENST00000536274 LOC105371242A0A075B767 164 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 TRAV34A0A0B4J273 112 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 MYBPHLA2RUH7 354 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 C17orf102A2RUQ5 167 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 C4orf47A7E2U8 309 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 ALG1L2C9J202 215 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 GABARAPH6UMI1 98 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 LEFTY2O00292 366 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 FLRT2O43155 660 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 OR2J2O76002 312 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 OR2F2O95006 317 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 PTBP3O95758 552 aaKnown RBP3.36□□□□□ -1.87
MCF2-210ENST00000536274 GPANK1O95872 356 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 IL5P05113 134 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 ANXA4P09525 319 aaPredicted RBP3.36□□□□□ -1.87
MCF2-210ENST00000536274 ACRP10323 421 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 TPT1P13693 172 aaKnown RBP3.36□□□□□ -1.87
MCF2-210ENST00000536274 CD34P28906 385 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 CDKN1BP46527 198 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 NPY4RP50391 375 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 DUSP3P51452 185 aaPredicted RBP3.36□□□□□ -1.87
MCF2-210ENST00000536274 CCR4P51679 360 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 TAS2R20P59543 309 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 SKP1P63208 163 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 CDK5Q00535 292 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 CHIT1Q13231 466 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 DHRS2Q13268 280 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 OR2F1Q13607 317 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 JOSD1Q15040 202 aaPredicted RBP3.36□□□□□ -1.87
MCF2-210ENST00000536274 SYPL1Q16563 259 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 WDR25Q64LD2 544 aaPredicted RBP3.36□□□□□ -1.87
MCF2-210ENST00000536274 ZNF880Q6PDB4 577 aa3.36□□□□□ -1.87
MCF2-210ENST00000536274 MEX3BQ6ZN04 569 aaKnown RBP3.36□□□□□ -1.87
MCF2-210ENST00000536274 FAM83HQ6ZRV2 1179 aaPredicted RBP3.36□□□□□ -1.87
MCF2-210ENST00000536274 LHFPL2Q6ZUX7 228 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms