RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 HIST2H3PS2Q5TEC6 136 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 PLBD1Q6P4A8 553 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 HIST2H3AQ71DI3 136 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 CXXC5Q7LFL8 322 aaKnown RBP11.32□□□□□ -0.6
CHFR-210ENST00000535527 PRIMA1Q86XR5 153 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 GLB1L2Q8IW92 636 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 FAM169BQ8N8A8 192 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 SMAP2Q8WU79 429 aaPredicted RBP11.32□□□□□ -0.6
CHFR-210ENST00000535527 NRG4Q8WWG1 115 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 AMELYQ99218 206 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 RIBC2Q9H4K1 309 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 ESRP2Q9H6T0 727 aaKnown RBP11.32□□□□□ -0.6
CHFR-210ENST00000535527 ASH2LQ9UBL3 628 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 AASSQ9UDR5 926 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 BAIAP2Q9UQB8 552 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 KLHDC2Q9Y2U9 406 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 COL6A5A8TX70 2615 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 C5orf63A6NC05 138 aa11.31□□□□□ -0.6
CHFR-210ENST00000535527 KIAA1324LA8MWY0 1029 aaPredicted RBP11.31□□□□□ -0.6
CHFR-210ENST00000535527 PRR32B1ATL7 298 aa11.31□□□□□ -0.6
CHFR-210ENST00000535527 HS3ST1O14792 307 aa11.31□□□□□ -0.6
CHFR-210ENST00000535527 RER1O15258 196 aa11.31□□□□□ -0.6
CHFR-210ENST00000535527 GOSR1O95249 250 aa11.31□□□□□ -0.6
CHFR-210ENST00000535527 SNAP29O95721 258 aa11.31□□□□□ -0.6
CHFR-210ENST00000535527 CD8AP01732 235 aa11.31□□□□□ -0.6
CHFR-210ENST00000535527 NPR2P20594 1047 aa11.31□□□□□ -0.6
CHFR-210ENST00000535527 PTAFRP25105 342 aa11.31□□□□□ -0.6
CHFR-210ENST00000535527 ARR3P36575 388 aa11.31□□□□□ -0.6
CHFR-210ENST00000535527 ALDH3A2P51648 485 aa11.31□□□□□ -0.6
CHFR-210ENST00000535527 NR1H2P55055 460 aa11.31□□□□□ -0.6
CHFR-210ENST00000535527 RSPO1Q2MKA7 263 aaPredicted RBP11.31□□□□□ -0.6
CHFR-210ENST00000535527 C3orf36Q3SXR2 165 aa11.31□□□□□ -0.6
CHFR-210ENST00000535527 SLC18B1Q6NT16 456 aa11.31□□□□□ -0.6
CHFR-210ENST00000535527 TMEM108Q6UXF1 575 aa11.31□□□□□ -0.6
CHFR-210ENST00000535527 Q71RC1 249 aaPredicted RBP11.31□□□□□ -0.6
CHFR-210ENST00000535527 VASH1Q7L8A9 365 aaPredicted RBP11.31□□□□□ -0.6
CHFR-210ENST00000535527 KRTAP1-3Q8IUG1 177 aa11.31□□□□□ -0.6
CHFR-210ENST00000535527 CPOQ8IVL8 374 aa11.31□□□□□ -0.6
CHFR-210ENST00000535527 ZNF101Q8IZC7 436 aa11.31□□□□□ -0.6
CHFR-210ENST00000535527 RFLNBQ8N5W9 214 aa11.31□□□□□ -0.6
CHFR-210ENST00000535527 FNDC8Q8TC99 324 aa11.31□□□□□ -0.6
CHFR-210ENST00000535527 DNAJC9Q8WXX5 260 aa11.31□□□□□ -0.6
CHFR-210ENST00000535527 MAP6Q96JE9 813 aa11.31□□□□□ -0.6
CHFR-210ENST00000535527 POM121L2Q96KW2 1035 aa11.31□□□□□ -0.6
CHFR-210ENST00000535527 SMR3AQ99954 134 aa11.31□□□□□ -0.6
CHFR-210ENST00000535527 POFUT1Q9H488 388 aa11.31□□□□□ -0.6
CHFR-210ENST00000535527 TOR3AQ9H497 397 aa11.31□□□□□ -0.6
CHFR-210ENST00000535527 ZNF556Q9HAH1 456 aa11.31□□□□□ -0.6
CHFR-210ENST00000535527 TVP23BQ9NYZ1 205 aa11.31□□□□□ -0.6
CHFR-210ENST00000535527 KLHL21Q9UJP4 597 aa11.31□□□□□ -0.6
CHFR-210ENST00000535527 FN1P02751 2386 aaKnown RBP11.31□□□□□ -0.6
CHFR-210ENST00000535527 RIIAD1A6NNX1 92 aa11.3□□□□□ -0.6
CHFR-210ENST00000535527 SYNGR3O43761 229 aa11.3□□□□□ -0.6
CHFR-210ENST00000535527 SELENOFO60613 162 aa11.3□□□□□ -0.6
CHFR-210ENST00000535527 SERPINA5P05154 406 aa11.3□□□□□ -0.6
CHFR-210ENST00000535527 DBHP09172 617 aa11.3□□□□□ -0.6
CHFR-210ENST00000535527 NR2C1P13056 603 aa11.3□□□□□ -0.6
CHFR-210ENST00000535527 CENPAP49450 140 aa11.3□□□□□ -0.6
CHFR-210ENST00000535527 ARHGDIAP52565 204 aa11.3□□□□□ -0.6
CHFR-210ENST00000535527 ESRRGP62508 458 aa11.3□□□□□ -0.6
CHFR-210ENST00000535527 TEKQ02763 1124 aa11.3□□□□□ -0.6
CHFR-210ENST00000535527 HSF2Q03933 536 aa11.3□□□□□ -0.6
CHFR-210ENST00000535527 LRRC36Q1X8D7 754 aa11.3□□□□□ -0.6
CHFR-210ENST00000535527 MST1LQ2TV78 715 aa11.3□□□□□ -0.6
CHFR-210ENST00000535527 DEFB113Q30KQ7 82 aa11.3□□□□□ -0.6
CHFR-210ENST00000535527 C11orf71Q6IPW1 123 aa11.3□□□□□ -0.6
CHFR-210ENST00000535527 RFPL4BQ6ZWI9 263 aa11.3□□□□□ -0.6
CHFR-210ENST00000535527 PROKR2Q8NFJ6 384 aa11.3□□□□□ -0.6
CHFR-210ENST00000535527 ZMYND19Q96E35 227 aaPredicted RBP11.3□□□□□ -0.6
CHFR-210ENST00000535527 PITX2Q99697 317 aa11.3□□□□□ -0.6
CHFR-210ENST00000535527 RBM4BQ9BQ04 359 aaKnown RBP11.3□□□□□ -0.6
CHFR-210ENST00000535527 GRIP2Q9C0E4 1043 aa11.3□□□□□ -0.6
CHFR-210ENST00000535527 OR51B6Q9H340 312 aa11.3□□□□□ -0.6
CHFR-210ENST00000535527 MARCH7Q9H992 704 aa11.3□□□□□ -0.6
CHFR-210ENST00000535527 MYEF2Q9P2K5 600 aaKnown RBP11.3□□□□□ -0.6
CHFR-210ENST00000535527 OR6C6A6NF89 314 aa11.29□□□□□ -0.6
CHFR-210ENST00000535527 CASQ2O14958 399 aaPredicted RBP11.29□□□□□ -0.6
CHFR-210ENST00000535527 FARS2O95363 451 aaKnown RBP11.29□□□□□ -0.6
CHFR-210ENST00000535527 RAB36O95755 333 aa11.29□□□□□ -0.6
CHFR-210ENST00000535527 RAF1P04049 648 aa11.29□□□□□ -0.6
CHFR-210ENST00000535527 ZNF3P17036 446 aa11.29□□□□□ -0.6
CHFR-210ENST00000535527 CRABP1P29762 137 aa11.29□□□□□ -0.6
CHFR-210ENST00000535527 LSM6P62312 80 aaKnown RBP11.29□□□□□ -0.6
CHFR-210ENST00000535527 AQP6Q13520 282 aa11.29□□□□□ -0.6
CHFR-210ENST00000535527 TRIP10Q15642 601 aa11.29□□□□□ -0.6
CHFR-210ENST00000535527 PCK2Q16822 640 aa11.29□□□□□ -0.6
CHFR-210ENST00000535527 KRTAP27-1Q3LI81 207 aa11.29□□□□□ -0.6
CHFR-210ENST00000535527 SLC36A2Q495M3 483 aa11.29□□□□□ -0.6
CHFR-210ENST00000535527 OGFRL1Q5TC84 451 aaPredicted RBP11.29□□□□□ -0.6
CHFR-210ENST00000535527 AADACL4Q5VUY2 407 aa11.29□□□□□ -0.6
CHFR-210ENST00000535527 FBXW10Q5XX13 1052 aa11.29□□□□□ -0.6
CHFR-210ENST00000535527 KRT80Q6KB66 452 aa11.29□□□□□ -0.6
CHFR-210ENST00000535527 SLC22A25Q6T423 547 aa11.29□□□□□ -0.6
CHFR-210ENST00000535527 TIGD4Q8IY51 512 aa11.29□□□□□ -0.6
CHFR-210ENST00000535527 CCDC36Q8IYA8 594 aa11.29□□□□□ -0.6
CHFR-210ENST00000535527 TCEANCQ8N8B7 351 aa11.29□□□□□ -0.6
CHFR-210ENST00000535527 SLC30A7Q8NEW0 376 aa11.29□□□□□ -0.6
CHFR-210ENST00000535527 WFDC11Q8NEX6 87 aa11.29□□□□□ -0.6
CHFR-210ENST00000535527 TMEM171Q8WVE6 324 aa11.29□□□□□ -0.6
CHFR-210ENST00000535527 STMN2Q93045 179 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms