RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 BBC3Q96PG8 261 aaPredicted RBP10.93□□□□□ -0.66
SCARB1-204ENST00000535005 JAM3Q9BX67 310 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 ENKD1Q9H0I2 346 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 KCNN2Q9H2S1 579 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 OR52D1Q9H346 318 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 EGLN3Q9H6Z9 239 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 CALHM2Q9HA72 323 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 CLCF1Q9UBD9 225 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 NPIPB13A6NJU9 1138 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 CD8B2A6NJW9 211 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 NPIPB4C9JG80 1138 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 ZNHIT1O43257 154 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 AKAP8O43823 692 aaKnown RBP10.93□□□□□ -0.66
SCARB1-204ENST00000535005 ABOP16442 354 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 KLK2P20151 261 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 SLC6A6P31641 620 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 SLC16A1P53985 500 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 RPS25P62851 125 aaKnown RBP10.93□□□□□ -0.66
SCARB1-204ENST00000535005 CDK5Q00535 292 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 GRK1Q15835 563 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 ACSF3Q4G176 576 aaPredicted RBP10.93□□□□□ -0.66
SCARB1-204ENST00000535005 ALG10Q5BKT4 473 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 TMEM225Q6GV28 225 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 THSD4Q6ZMP0 1018 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 DPY19L2P2Q6ZN68 376 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 FCRLAQ7L513 359 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 PXKQ7Z7A4 578 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 OR8D4Q8NGM9 314 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 RNF128Q8TEB7 428 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 SAMD8Q96LT4 415 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 SORCS2Q96PQ0 1159 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 C7orf50Q9BRJ6 194 aaKnown RBP10.93□□□□□ -0.66
SCARB1-204ENST00000535005 CLEC4MQ9H2X3 399 aaPredicted RBP10.93□□□□□ -0.66
SCARB1-204ENST00000535005 RNF122Q9H9V4 155 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 GP6Q9HCN6 339 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 B3GAT2Q9NPZ5 323 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 B3GAT1Q9P2W7 334 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 NUBP2Q9Y5Y2 271 aa10.93□□□□□ -0.66
SCARB1-204ENST00000535005 IGKV3D-15A0A087WSY6 115 aa10.92□□□□□ -0.66
SCARB1-204ENST00000535005 FIGNL2A6NMB9 653 aa10.92□□□□□ -0.66
SCARB1-204ENST00000535005 ZNF716A6NP11 495 aa10.92□□□□□ -0.66
SCARB1-204ENST00000535005 PRRG2O14669 202 aa10.92□□□□□ -0.66
SCARB1-204ENST00000535005 HPGDSO60760 199 aa10.92□□□□□ -0.66
SCARB1-204ENST00000535005 RAMP1O60894 148 aa10.92□□□□□ -0.66
SCARB1-204ENST00000535005 SOX14O95416 240 aa10.92□□□□□ -0.66
SCARB1-204ENST00000535005 IGFBP1P08833 259 aaPredicted RBP10.92□□□□□ -0.66
SCARB1-204ENST00000535005 FCGR2AP12318 317 aa10.92□□□□□ -0.66
SCARB1-204ENST00000535005 APEHP13798 732 aaKnown RBP10.92□□□□□ -0.66
SCARB1-204ENST00000535005 GIPRP48546 466 aa10.92□□□□□ -0.66
SCARB1-204ENST00000535005 TGM4P49221 684 aa10.92□□□□□ -0.66
SCARB1-204ENST00000535005 RAB14P61106 215 aa10.92□□□□□ -0.66
SCARB1-204ENST00000535005 SNRPD2P62316 118 aaKnown RBP10.92□□□□□ -0.66
SCARB1-204ENST00000535005 GTF3C1Q12789 2109 aa10.92□□□□□ -0.66
SCARB1-204ENST00000535005 SLC17A1Q14916 467 aa10.92□□□□□ -0.66
SCARB1-204ENST00000535005 PON3Q15166 354 aa10.92□□□□□ -0.66
SCARB1-204ENST00000535005 NSUN5P2Q63ZY6 315 aa10.92□□□□□ -0.66
SCARB1-204ENST00000535005 KCTD20Q7Z5Y7 419 aa10.92□□□□□ -0.66
SCARB1-204ENST00000535005 LRRC28Q86X40 367 aaPredicted RBP10.92□□□□□ -0.66
SCARB1-204ENST00000535005 ARIH2OSQ8N7S6 290 aa10.92□□□□□ -0.66
SCARB1-204ENST00000535005 OR52N1Q8NH53 320 aa10.92□□□□□ -0.66
SCARB1-204ENST00000535005 FNDC9Q8TBE3 224 aa10.92□□□□□ -0.66
SCARB1-204ENST00000535005 TEX47Q8TBZ9 253 aa10.92□□□□□ -0.66
SCARB1-204ENST00000535005 ROBO4Q8WZ75 1007 aa10.92□□□□□ -0.66
SCARB1-204ENST00000535005 WNT2BQ93097 391 aa10.92□□□□□ -0.66
SCARB1-204ENST00000535005 RFKQ969G6 155 aa10.92□□□□□ -0.66
SCARB1-204ENST00000535005 PLA2G12AQ9BZM1 189 aa10.92□□□□□ -0.66
SCARB1-204ENST00000535005 NRIP3Q9NQ35 241 aa10.92□□□□□ -0.66
SCARB1-204ENST00000535005 COMMD3Q9UBI1 195 aa10.92□□□□□ -0.66
SCARB1-204ENST00000535005 RABL2AQ9UBK7 228 aaPredicted RBP10.92□□□□□ -0.66
SCARB1-204ENST00000535005 UBQLN2Q9UHD9 624 aa10.92□□□□□ -0.66
SCARB1-204ENST00000535005 RABL2BQ9UNT1 228 aa10.92□□□□□ -0.66
SCARB1-204ENST00000535005 BAIAP2Q9UQB8 552 aa10.92□□□□□ -0.66
SCARB1-204ENST00000535005 RP1L1Q8IWN7 2480 aaPredicted RBP10.92□□□□□ -0.66
SCARB1-204ENST00000535005 SHANK1Q9Y566 2161 aa10.92□□□□□ -0.66
SCARB1-204ENST00000535005 IGHV3-15A0A0B4J1V0 119 aa10.91□□□□□ -0.66
SCARB1-204ENST00000535005 SLC22A20A6NK97 555 aa10.91□□□□□ -0.66
SCARB1-204ENST00000535005 ARPC3O15145 178 aa10.91□□□□□ -0.66
SCARB1-204ENST00000535005 FABP7O15540 132 aa10.91□□□□□ -0.66
SCARB1-204ENST00000535005 TSPAN9O75954 239 aa10.91□□□□□ -0.66
SCARB1-204ENST00000535005 IGHMP01871 453 aa10.91□□□□□ -0.66
SCARB1-204ENST00000535005 CD14P08571 375 aa10.91□□□□□ -0.66
SCARB1-204ENST00000535005 CD53P19397 219 aa10.91□□□□□ -0.66
SCARB1-204ENST00000535005 IL32P24001 234 aa10.91□□□□□ -0.66
SCARB1-204ENST00000535005 MTNR1BP49286 362 aa10.91□□□□□ -0.66
SCARB1-204ENST00000535005 FABP5Q01469 135 aa10.91□□□□□ -0.66
SCARB1-204ENST00000535005 RNPS1Q15287 305 aaKnown RBP10.91□□□□□ -0.66
SCARB1-204ENST00000535005 ZNF57Q68EA5 555 aaPredicted RBP10.91□□□□□ -0.66
SCARB1-204ENST00000535005 ZNF585AQ6P3V2 769 aa10.91□□□□□ -0.66
SCARB1-204ENST00000535005 CD163Q86VB7 1156 aa10.91□□□□□ -0.66
SCARB1-204ENST00000535005 DOLPP1Q86YN1 238 aa10.91□□□□□ -0.66
SCARB1-204ENST00000535005 KDM8Q8N371 416 aa10.91□□□□□ -0.66
SCARB1-204ENST00000535005 LNX2Q8N448 690 aa10.91□□□□□ -0.66
SCARB1-204ENST00000535005 ZNF485Q8NCK3 441 aa10.91□□□□□ -0.66
SCARB1-204ENST00000535005 OR52L1Q8NGH7 329 aa10.91□□□□□ -0.66
SCARB1-204ENST00000535005 RFT1Q96AA3 541 aa10.91□□□□□ -0.66
SCARB1-204ENST00000535005 SLC38A2Q96QD8 506 aa10.91□□□□□ -0.66
SCARB1-204ENST00000535005 PRRG4Q9BZD6 226 aa10.91□□□□□ -0.66
SCARB1-204ENST00000535005 PPA2Q9H2U2 334 aa10.91□□□□□ -0.66
SCARB1-204ENST00000535005 DPAGT1Q9H3H5 408 aa10.91□□□□□ -0.66
SCARB1-204ENST00000535005 GHITMQ9H3K2 345 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms