RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 PRAMEF7Q5VXH5 474 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 C3orf33Q6P1S2 294 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 C6orf89Q6UWU4 347 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 LYPD2Q6UXB3 125 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 C9orf47Q6ZRZ4 202 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 Q6ZTC4 211 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 CREB3L2Q70SY1 520 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 MOGAT3Q86VF5 341 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 ANKRD13BQ86YJ7 626 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 ZNF584Q8IVC4 421 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 MISPQ8IVT2 679 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 CTAGE3PQ8IX95 158 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 MREGQ8N565 214 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 CDRT4Q8N9R6 151 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 POMGNT2Q8NAT1 580 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 ICA1LQ8NDH6 482 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 CLHC1Q8NHS4 586 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 ZNF563Q8TA94 476 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 METTL6Q8TCB7 284 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 MAGEE2Q8TD90 523 aaPredicted RBP2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 ACTRT1Q8TDG2 376 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 GEMIN6Q8WXD5 167 aaKnown RBP2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 TMEM45BQ96B21 275 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 UPRTQ96BW1 309 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 NEURL3Q96EH8 262 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 TIMD4Q96H15 378 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 SDF2Q99470 211 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 B9D2Q9BPU9 175 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 PCGF1Q9BSM1 259 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 NAA11Q9BSU3 229 aaPredicted RBP2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 NAT9Q9BTE0 207 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 NMUR2Q9GZQ4 415 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 SEMA6AQ9H2E6 1030 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 C16orf95Q9H693 158 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 PATZ1Q9HBE1 687 aaKnown RBP2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 TMEM165Q9HC07 324 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 FGFR1OP2Q9NVK5 253 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 TAS2R7Q9NYW3 318 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 ZNF224Q9NZL3 707 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 NDUFAF4Q9P032 175 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 TMEM181Q9P2C4 612 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 SLC17A7Q9P2U7 560 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 CHRNA9Q9UGM1 479 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 OSGIN1Q9UJX0 560 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 SLC13A4Q9UKG4 626 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 TRAPPC4Q9Y296 219 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 SLC9A8Q9Y2E8 581 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 TMED7Q9Y3B3 224 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 NPTNQ9Y639 398 aa2.44□□□□□ -2.02
CHMP4A-208ENST00000534106 CENPVL3A0A0U1RRI6 287 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 KIR2DS1A0A191URI9 304 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 EXOC1LA0A1B0GW35 172 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 TMEM120BA0PK00 339 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 CFAP73A6NFT4 308 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 HMX3A6NHT5 357 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 AGAP5A6NIR3 686 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 ZSCAN5BA6NJL1 495 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 LIPT2A6NK58 231 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 FAM159BA6NKW6 160 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 SYCE1LA8MT33 242 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 H3BNH8 94 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 J3KTA2 159 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 TNFRSF13BO14836 293 aaPredicted RBP2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 PLXNB1O43157 2135 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 RIPK2O43353 540 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 MGRN1O60291 552 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 UGT2B17O75795 530 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 CIB2O75838 187 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 TSPAN9O75954 239 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 TNFRSF6BO95407 300 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 TGDSO95455 350 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 CSTAP01040 98 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 IGHV2-70P01814 119 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 HMGN2P05204 90 aaKnown RBP2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 LCKP06239 509 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 CHRM4P08173 479 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 INHBAP08476 426 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 WNT2P09544 360 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 CCDC159P0C7I6 412 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 TMEM225BP0DP42 221 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 HLA-DOBP13765 273 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 ATP6V1C1P21283 382 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 PAX6P26367 422 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 TACR3P29371 465 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 CRABP2P29373 138 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 NTSP30990 170 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 PGM1P36871 562 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 MPV17P39210 176 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 GSTM5P46439 218 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 ERFP50548 548 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 RASSF2P50749 326 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 FOXA1P55317 472 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 NANOS2P60321 138 aaKnown RBP2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 GALK2Q01415 458 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 ACSM2AQ08AH3 577 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 FRG1Q14331 258 aaKnown RBP2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 CHI3L2Q15782 390 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 TIGD6Q17RP2 521 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 GSG1Q2KHT4 349 aa2.43□□□□□ -2.02
CHMP4A-208ENST00000534106 TRMT5Q32P41 509 aaKnown RBP2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms