RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 GSK3BP49841 420 aa17.74■□□□□ 0.43
SMPD1-204ENST00000530395 TMEM255AQ5JRV8 349 aa17.74■□□□□ 0.43
SMPD1-204ENST00000530395 TBPL2Q6SJ96 375 aa17.74■□□□□ 0.43
SMPD1-204ENST00000530395 EMC7Q9NPA0 242 aa17.74■□□□□ 0.43
SMPD1-204ENST00000530395 ADAM18Q9Y3Q7 739 aa17.74■□□□□ 0.43
SMPD1-204ENST00000530395 TENM1Q9UKZ4 2725 aa17.74■□□□□ 0.43
SMPD1-204ENST00000530395 ISPDA4D126 451 aa17.73■□□□□ 0.43
SMPD1-204ENST00000530395 J3QLI3 93 aa17.73■□□□□ 0.43
SMPD1-204ENST00000530395 CDC42EP2O14613 210 aa17.73■□□□□ 0.43
SMPD1-204ENST00000530395 DOK2O60496 412 aa17.73■□□□□ 0.43
SMPD1-204ENST00000530395 TUBG1P23258 451 aa17.73■□□□□ 0.43
SMPD1-204ENST00000530395 HTR5AP47898 357 aa17.73■□□□□ 0.43
SMPD1-204ENST00000530395 NUDT2P50583 147 aa17.73■□□□□ 0.43
SMPD1-204ENST00000530395 MESTQ5EB52 335 aa17.73■□□□□ 0.43
SMPD1-204ENST00000530395 MTX3Q5HYI7 312 aa17.73■□□□□ 0.43
SMPD1-204ENST00000530395 HACD2Q6Y1H2 254 aa17.73■□□□□ 0.43
SMPD1-204ENST00000530395 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.73■□□□□ 0.43
SMPD1-204ENST00000530395 Q96M85 177 aa17.73■□□□□ 0.43
SMPD1-204ENST00000530395 KCTD14Q9BQ13 255 aaPredicted RBP17.73■□□□□ 0.43
SMPD1-204ENST00000530395 NMNAT1Q9HAN9 279 aaPredicted RBP17.73■□□□□ 0.43
SMPD1-204ENST00000530395 TUBG2Q9NRH3 451 aa17.73■□□□□ 0.43
SMPD1-204ENST00000530395 RPS6KA6Q9UK32 745 aa17.73■□□□□ 0.43
SMPD1-204ENST00000530395 ENPP4Q9Y6X5 453 aa17.73■□□□□ 0.43
SMPD1-204ENST00000530395 LOC105371242A0A075B767 164 aa17.72■□□□□ 0.43
SMPD1-204ENST00000530395 PRSS37A4D1T9 235 aa17.72■□□□□ 0.43
SMPD1-204ENST00000530395 SGCEO43556 437 aa17.72■□□□□ 0.43
SMPD1-204ENST00000530395 UBOX5O94941 541 aa17.72■□□□□ 0.43
SMPD1-204ENST00000530395 VENTXO95231 258 aa17.72■□□□□ 0.43
SMPD1-204ENST00000530395 CD55P08174 381 aa17.72■□□□□ 0.43
SMPD1-204ENST00000530395 EPHA1P21709 976 aa17.72■□□□□ 0.43
SMPD1-204ENST00000530395 TNFSF4P23510 183 aa17.72■□□□□ 0.43
SMPD1-204ENST00000530395 DCAF12L2Q5VW00 463 aa17.72■□□□□ 0.43
SMPD1-204ENST00000530395 SEMA6DQ8NFY4 1073 aa17.72■□□□□ 0.43
SMPD1-204ENST00000530395 FAM46AQ96IP4 442 aaKnown RBP17.72■□□□□ 0.43
SMPD1-204ENST00000530395 MSL2Q9HCI7 577 aa17.72■□□□□ 0.43
SMPD1-204ENST00000530395 TBCCD1Q9NVR7 557 aa17.72■□□□□ 0.43
SMPD1-204ENST00000530395 KLHL21Q9UJP4 597 aa17.72■□□□□ 0.43
SMPD1-204ENST00000530395 FAM32AQ9Y421 112 aaKnown RBP17.72■□□□□ 0.43
SMPD1-204ENST00000530395 TEX13CA0A0J9YWL9 993 aa17.71■□□□□ 0.43
SMPD1-204ENST00000530395 NDUFB2O95178 105 aa17.71■□□□□ 0.43
SMPD1-204ENST00000530395 H1F0P07305 194 aaKnown RBP17.71■□□□□ 0.43
SMPD1-204ENST00000530395 GATA3P23771 443 aa17.71■□□□□ 0.43
SMPD1-204ENST00000530395 TNFAIP6P98066 277 aaPredicted RBP17.71■□□□□ 0.43
SMPD1-204ENST00000530395 PSG7Q13046 419 aa17.71■□□□□ 0.43
SMPD1-204ENST00000530395 AQP6Q13520 282 aa17.71■□□□□ 0.43
SMPD1-204ENST00000530395 KRR1Q13601 381 aaKnown RBP17.71■□□□□ 0.43
SMPD1-204ENST00000530395 GPR139Q6DWJ6 353 aa17.71■□□□□ 0.43
SMPD1-204ENST00000530395 C8orf82Q6P1X6 216 aaPredicted RBP17.71■□□□□ 0.43
SMPD1-204ENST00000530395 C12orf54Q6X4T0 127 aa17.71■□□□□ 0.43
SMPD1-204ENST00000530395 FAM122BQ7Z309 247 aa17.71■□□□□ 0.43
SMPD1-204ENST00000530395 TREML1Q86YW5 311 aa17.71■□□□□ 0.43
SMPD1-204ENST00000530395 SLC7A13Q8TCU3 470 aa17.71■□□□□ 0.43
SMPD1-204ENST00000530395 ST7LQ8TDW4 575 aa17.71■□□□□ 0.43
SMPD1-204ENST00000530395 COG8Q96MW5 612 aa17.71■□□□□ 0.43
SMPD1-204ENST00000530395 KRCC1Q9NPI7 259 aaPredicted RBP17.71■□□□□ 0.43
SMPD1-204ENST00000530395 ZNF446Q9NWS9 450 aa17.71■□□□□ 0.43
SMPD1-204ENST00000530395 UBAP1Q9NZ09 502 aa17.71■□□□□ 0.43
SMPD1-204ENST00000530395 PCDHB10Q9UN67 800 aa17.71■□□□□ 0.43
SMPD1-204ENST00000530395 DYSFO75923 2080 aa17.71■□□□□ 0.43
SMPD1-204ENST00000530395 SCG5P05408 212 aa17.7■□□□□ 0.42
SMPD1-204ENST00000530395 CTLA4P16410 223 aa17.7■□□□□ 0.42
SMPD1-204ENST00000530395 SDHAP31040 664 aa17.7■□□□□ 0.42
SMPD1-204ENST00000530395 FGD3Q5JSP0 725 aa17.7■□□□□ 0.42
SMPD1-204ENST00000530395 USP43Q70EL4 1123 aa17.7■□□□□ 0.42
SMPD1-204ENST00000530395 C1QL2Q7Z5L3 287 aa17.7■□□□□ 0.42
SMPD1-204ENST00000530395 JMJD8Q96S16 334 aa17.7■□□□□ 0.42
SMPD1-204ENST00000530395 TMPRSS13Q9BYE2 586 aa17.7■□□□□ 0.42
SMPD1-204ENST00000530395 RERGLQ9H628 205 aa17.7■□□□□ 0.42
SMPD1-204ENST00000530395 PLEK2Q9NYT0 353 aa17.7■□□□□ 0.42
SMPD1-204ENST00000530395 A0A1W2PRQ8 180 aa17.69■□□□□ 0.42
SMPD1-204ENST00000530395 KHDRBS3O75525 346 aaKnown RBP17.69■□□□□ 0.42
SMPD1-204ENST00000530395 NCK1P16333 377 aa17.69■□□□□ 0.42
SMPD1-204ENST00000530395 ZNF26P17031 533 aaPredicted RBP17.69■□□□□ 0.42
SMPD1-204ENST00000530395 TNFRSF1AP19438 455 aa17.69■□□□□ 0.42
SMPD1-204ENST00000530395 MDH1P40925 334 aaKnown RBP17.69■□□□□ 0.42
SMPD1-204ENST00000530395 ACTG1P63261 375 aa17.69■□□□□ 0.42
SMPD1-204ENST00000530395 CDK5R2Q13319 367 aa17.69■□□□□ 0.42
SMPD1-204ENST00000530395 DGCR6Q14129 220 aa17.69■□□□□ 0.42
SMPD1-204ENST00000530395 C1orf229Q6ZS94 237 aaPredicted RBP17.69■□□□□ 0.42
SMPD1-204ENST00000530395 ZNF771Q7L3S4 317 aaPredicted RBP17.69■□□□□ 0.42
SMPD1-204ENST00000530395 VASH1Q7L8A9 365 aaPredicted RBP17.69■□□□□ 0.42
SMPD1-204ENST00000530395 ADCK1Q86TW2 530 aa17.69■□□□□ 0.42
SMPD1-204ENST00000530395 GLB1L2Q8IW92 636 aa17.69■□□□□ 0.42
SMPD1-204ENST00000530395 RASD2Q96D21 266 aa17.69■□□□□ 0.42
SMPD1-204ENST00000530395 CMTM5Q96DZ9 223 aa17.69■□□□□ 0.42
SMPD1-204ENST00000530395 GPX7Q96SL4 187 aaPredicted RBP17.69■□□□□ 0.42
SMPD1-204ENST00000530395 SYT4Q9H2B2 425 aa17.69■□□□□ 0.42
SMPD1-204ENST00000530395 MED4Q9NPJ6 270 aa17.69■□□□□ 0.42
SMPD1-204ENST00000530395 ABCD2Q9UBJ2 740 aa17.69■□□□□ 0.42
SMPD1-204ENST00000530395 PURGQ9UJV8 347 aaKnown RBP17.69■□□□□ 0.42
SMPD1-204ENST00000530395 AURKCQ9UQB9 309 aa17.69■□□□□ 0.42
SMPD1-204ENST00000530395 SIGLEC7Q9Y286 467 aa17.69■□□□□ 0.42
SMPD1-204ENST00000530395 NPTNQ9Y639 398 aa17.69■□□□□ 0.42
SMPD1-204ENST00000530395 SLC16A7O60669 478 aa17.68■□□□□ 0.42
SMPD1-204ENST00000530395 GMNNO75496 209 aa17.68■□□□□ 0.42
SMPD1-204ENST00000530395 RGS9O75916 674 aaPredicted RBP17.68■□□□□ 0.42
SMPD1-204ENST00000530395 AVPP01185 164 aa17.68■□□□□ 0.42
SMPD1-204ENST00000530395 RHCEP18577 417 aa17.68■□□□□ 0.42
SMPD1-204ENST00000530395 KITLGP21583 273 aa17.68■□□□□ 0.42
SMPD1-204ENST00000530395 HILS1P60008 231 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms