RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 DDI1Q8WTU0 396 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 CCDC12Q8WUD4 166 aaPredicted RBP3.07□□□□□ -1.92
C11orf88-204ENST00000529661 RNF138Q8WVD3 245 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 TMEM54Q969K7 222 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 C9orf72Q96LT7 481 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 FAM210AQ96ND0 272 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 NANOGQ9H9S0 305 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 UGT1A7Q9HAW7 530 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 UGT1A8Q9HAW9 530 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 ADA2Q9NZK5 511 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 MYEF2Q9P2K5 600 aaKnown RBP3.07□□□□□ -1.92
C11orf88-204ENST00000529661 CNTNAP1P78357 1384 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 WDR62O43379 1518 aa3.07□□□□□ -1.92
C11orf88-204ENST00000529661 PEX7O00628 323 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 ZNF646O15015 1829 aaPredicted RBP3.06□□□□□ -1.92
C11orf88-204ENST00000529661 ZBTB5O15062 677 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 AIREO43918 545 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 FCN3O75636 299 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 HLA-HP01893 362 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 ANXA5P08758 320 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 GIPP09681 153 aaPredicted RBP3.06□□□□□ -1.92
C11orf88-204ENST00000529661 IGHV3-43DP0DP04 118 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 RCC1P18754 421 aaPredicted RBP3.06□□□□□ -1.92
C11orf88-204ENST00000529661 TNFSF9P41273 254 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 SLC1A2P43004 574 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 RORCP51449 518 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 CCR8P51685 355 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 FGF8P55075 233 aaPredicted RBP3.06□□□□□ -1.92
C11orf88-204ENST00000529661 CTAG1AP78358 180 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 LTBP1Q14766 1721 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 SGCAQ16586 387 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 SPECC1LQ69YQ0 1117 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 NKAIN4Q8IVV8 208 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 EID2Q8N6I1 236 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 OR6X1Q8NH79 312 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 CXorf40AQ8TE69 158 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 CEMIPQ8WUJ3 1361 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 SDR42E1Q8WUS8 393 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 PIH1D2Q8WWB5 315 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 CACNG8Q8WXS5 425 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 MRGPRFQ96AM1 343 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 ELSPBP1Q96BH3 223 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 GLT1D1Q96MS3 346 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 SLC29A1Q99808 456 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 NTN4Q9HB63 628 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 SLC25A37Q9NYZ2 338 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 GNPTGQ9UJJ9 305 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 LSM7Q9UK45 103 aaKnown RBP3.06□□□□□ -1.92
C11orf88-204ENST00000529661 RBMX2Q9Y388 322 aaKnown RBP3.06□□□□□ -1.92
C11orf88-204ENST00000529661 SAR1BQ9Y6B6 198 aa3.06□□□□□ -1.92
C11orf88-204ENST00000529661 PDS5BQ9NTI5 1447 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 BRD4O60885 1362 aaPredicted RBP3.05□□□□□ -1.92
C11orf88-204ENST00000529661 TRAV39A0A0B4J263 110 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 GOLGA8QA0A0J9YX86 632 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 H3BNH8 94 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 PPP1R2P9O14990 202 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 SIVA1O15304 175 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 ZNF861PO60384 105 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 CCNB2O95067 398 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 SCELO95171 688 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 SMC2O95347 1197 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 C6orf47O95873 294 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 INSP01308 110 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 CSF3P09919 207 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 SMIM10L1P0DMW3 83 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 FOLR1P15328 257 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 MGMTP16455 207 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 IL32P24001 234 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 CFHR2P36980 270 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 AQP2P41181 271 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 PSMD4P55036 377 aaKnown RBP3.05□□□□□ -1.92
C11orf88-204ENST00000529661 LCN2P80188 198 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 LRRC63Q05C16 580 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 REG3AQ06141 175 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 PGGHGQ32M88 737 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 ANKRD26P1Q6NSI1 321 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 SPESP1Q6UW49 350 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 ZNF621Q6ZSS3 439 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 TRMT10CQ7L0Y3 403 aaKnown RBP3.05□□□□□ -1.92
C11orf88-204ENST00000529661 FAM122BQ7Z309 247 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 MYOCDQ8IZQ8 938 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 PDIK1LQ8N165 341 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 ARHGAP18Q8N392 663 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 C17orf78Q8N4C9 275 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 FAM71E2Q8N5Q1 922 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 TTC29Q8NA56 475 aaPredicted RBP3.05□□□□□ -1.92
C11orf88-204ENST00000529661 OR52E5Q8NH55 327 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 ACER1Q8TDN7 264 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 DUS3LQ96G46 650 aaKnown RBP3.05□□□□□ -1.92
C11orf88-204ENST00000529661 AURKBQ96GD4 344 aaPredicted RBP3.05□□□□□ -1.92
C11orf88-204ENST00000529661 SMIM10Q96HG1 83 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 ZNF396Q96N95 335 aaPredicted RBP3.05□□□□□ -1.92
C11orf88-204ENST00000529661 TSSK3Q96PN8 268 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 ZNF317Q96PQ6 595 aaPredicted RBP3.05□□□□□ -1.92
C11orf88-204ENST00000529661 OR2M2Q96R28 347 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 HINT2Q9BX68 163 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 OSBPL10Q9BXB5 764 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 BBS2Q9BXC9 721 aa3.05□□□□□ -1.92
C11orf88-204ENST00000529661 FRMD8P1Q9BZ68 369 aaPredicted RBP3.05□□□□□ -1.92
C11orf88-204ENST00000529661 HDHD2Q9H0R4 259 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms