RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 NDUFS8O00217 210 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 LILRA1O75019 489 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 MMP7P09237 267 aaPredicted RBP10.76□□□□□ -0.69
SMCO4-202ENST00000525141 CSF3P09919 207 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 CCL2P13500 99 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 OSMP13725 252 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 DAOP14920 347 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 HIST1H1CP16403 213 aaKnown RBP10.76□□□□□ -0.69
SMCO4-202ENST00000525141 COL8A2P25067 703 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 GIFP27352 417 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 CRABP1P29762 137 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 EVX1P49640 407 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 GGTLC2Q14390 218 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 SLC36A2Q495M3 483 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 CLEC12AQ5QGZ9 265 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 ZNF362Q5T0B9 420 aaPredicted RBP10.76□□□□□ -0.69
SMCO4-202ENST00000525141 FAHD1Q6P587 224 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 AMIGO2Q86SJ2 522 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 ZNF786Q8N393 782 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 ATG16L2Q8NAA4 619 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 CPEB3Q8NE35 698 aaKnown RBP10.76□□□□□ -0.69
SMCO4-202ENST00000525141 OR2T33Q8NG76 320 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 OR8D4Q8NGM9 314 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 OR4K13Q8NH42 304 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 NEU4Q8WWR8 484 aaPredicted RBP10.76□□□□□ -0.69
SMCO4-202ENST00000525141 NSMAFQ92636 917 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 NABP1Q96AH0 204 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 MSI2Q96DH6 328 aaKnown RBP10.76□□□□□ -0.69
SMCO4-202ENST00000525141 DDOQ99489 341 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 OSBPL10Q9BXB5 764 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 BPESC1Q9GZL8 116 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 NUAK2Q9H093 628 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 RAB1BQ9H0U4 201 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 SYT4Q9H2B2 425 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 KCNN2Q9H2S1 579 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 TBC1D23Q9NUY8 699 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 FZR1Q9UM11 496 aa10.76□□□□□ -0.69
SMCO4-202ENST00000525141 LRP5LA4QPB2 252 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 VSTM5A8MXK1 200 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 H3BN98 237 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 H3BNX3 289 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 H7C1C5 153 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 SLC16A7O60669 478 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 KHDRBS3O75525 346 aaKnown RBP10.75□□□□□ -0.69
SMCO4-202ENST00000525141 SOX14O95416 240 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 RENP00797 406 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 CTLA4P16410 223 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 LAP3P28838 519 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 IL2RGP31785 369 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 CDAP32320 146 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 DAPP51397 102 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 LCN6P62502 163 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 RIN1Q13671 783 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 SGCAQ16586 387 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 SLC36A3Q495N2 470 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 ELFN2Q5R3F8 820 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 SLC35F1Q5T1Q4 408 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 LEG1Q6P5S2 330 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 DNM1P34Q6PK57 102 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 SLC16A14Q7RTX9 510 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 SYT9Q86SS6 491 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 JAZF1Q86VZ6 243 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 GLB1L2Q8IW92 636 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 PARP8Q8N3A8 854 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 NPEPL1Q8NDH3 523 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 OR52E2Q8NGJ4 325 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 TEX47Q8TBZ9 253 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 UBASH3BQ8TF42 649 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 NMNAT3Q96T66 252 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 SYT3Q9BQG1 590 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 GABARAPL1Q9H0R8 117 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 TPK1Q9H3S4 243 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 TMEM160Q9NX00 188 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 KLHL21Q9UJP4 597 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 B9D1Q9UPM9 204 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 FKBP7Q9Y680 259 aa10.75□□□□□ -0.69
SMCO4-202ENST00000525141 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.74□□□□□ -0.69
SMCO4-202ENST00000525141 OR6C68A6NDL8 312 aa10.74□□□□□ -0.69
SMCO4-202ENST00000525141 LMX1BO60663 402 aa10.74□□□□□ -0.69
SMCO4-202ENST00000525141 RAB36O95755 333 aa10.74□□□□□ -0.69
SMCO4-202ENST00000525141 CLPTM1O96005 669 aa10.74□□□□□ -0.69
SMCO4-202ENST00000525141 PTHP01270 115 aa10.74□□□□□ -0.69
SMCO4-202ENST00000525141 HPXP02790 462 aa10.74□□□□□ -0.69
SMCO4-202ENST00000525141 SCG5P05408 212 aa10.74□□□□□ -0.69
SMCO4-202ENST00000525141 CST2P09228 141 aa10.74□□□□□ -0.69
SMCO4-202ENST00000525141 ZNF23P17027 643 aa10.74□□□□□ -0.69
SMCO4-202ENST00000525141 MSR1P21757 451 aa10.74□□□□□ -0.69
SMCO4-202ENST00000525141 ALDH3B1P43353 468 aa10.74□□□□□ -0.69
SMCO4-202ENST00000525141 PCBD1P61457 104 aa10.74□□□□□ -0.69
SMCO4-202ENST00000525141 LSM6P62312 80 aaKnown RBP10.74□□□□□ -0.69
SMCO4-202ENST00000525141 CDK5Q00535 292 aa10.74□□□□□ -0.69
SMCO4-202ENST00000525141 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.74□□□□□ -0.69
SMCO4-202ENST00000525141 MAD2L1BPQ15013 274 aaPredicted RBP10.74□□□□□ -0.69
SMCO4-202ENST00000525141 TRIP10Q15642 601 aa10.74□□□□□ -0.69
SMCO4-202ENST00000525141 KCNMB1Q16558 191 aa10.74□□□□□ -0.69
SMCO4-202ENST00000525141 CARTPTQ16568 116 aa10.74□□□□□ -0.69
SMCO4-202ENST00000525141 KDM4DQ6B0I6 523 aa10.74□□□□□ -0.69
SMCO4-202ENST00000525141 SLC27A4Q6P1M0 643 aa10.74□□□□□ -0.69
SMCO4-202ENST00000525141 TMEM53Q6P2H8 277 aa10.74□□□□□ -0.69
SMCO4-202ENST00000525141 ZBTB46Q86UZ6 589 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms