RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 IQCF1Q8N6M8 205 aa13.04□□□□□ -0.32
SF3B2-202ENST00000524475 PROKR2Q8NFJ6 384 aa13.04□□□□□ -0.32
SF3B2-202ENST00000524475 AKR7LQ8NHP1 331 aa13.04□□□□□ -0.32
SF3B2-202ENST00000524475 IPCEF1Q8WWN9 437 aaPredicted RBP13.04□□□□□ -0.32
SF3B2-202ENST00000524475 RBM4BQ9BQ04 359 aaKnown RBP13.04□□□□□ -0.32
SF3B2-202ENST00000524475 BCL2L14Q9BZR8 327 aa13.04□□□□□ -0.32
SF3B2-202ENST00000524475 FN3KQ9H479 309 aa13.04□□□□□ -0.32
SF3B2-202ENST00000524475 S100A14Q9HCY8 104 aa13.04□□□□□ -0.32
SF3B2-202ENST00000524475 KRT84Q9NSB2 600 aa13.04□□□□□ -0.32
SF3B2-202ENST00000524475 ASH2LQ9UBL3 628 aa13.04□□□□□ -0.32
SF3B2-202ENST00000524475 CYB5R1Q9UHQ9 305 aa13.04□□□□□ -0.32
SF3B2-202ENST00000524475 TMEFF2Q9UIK5 374 aaPredicted RBP13.04□□□□□ -0.32
SF3B2-202ENST00000524475 OAZ3Q9UMX2 235 aa13.04□□□□□ -0.32
SF3B2-202ENST00000524475 LHFPL6Q9Y693 200 aa13.04□□□□□ -0.32
SF3B2-202ENST00000524475 LOC100509620A0A075B734 347 aa13.03□□□□□ -0.32
SF3B2-202ENST00000524475 OR6C6A6NF89 314 aa13.03□□□□□ -0.32
SF3B2-202ENST00000524475 TFP02787 698 aa13.03□□□□□ -0.32
SF3B2-202ENST00000524475 OR4A8P0C604 315 aa13.03□□□□□ -0.32
SF3B2-202ENST00000524475 SPI1P17947 270 aa13.03□□□□□ -0.32
SF3B2-202ENST00000524475 PAICSP22234 425 aaKnown RBP13.03□□□□□ -0.32
SF3B2-202ENST00000524475 POU1F1P28069 291 aa13.03□□□□□ -0.32
SF3B2-202ENST00000524475 THBS4P35443 961 aa13.03□□□□□ -0.32
SF3B2-202ENST00000524475 GGT2P36268 569 aa13.03□□□□□ -0.32
SF3B2-202ENST00000524475 GDI2P50395 445 aaKnown RBP13.03□□□□□ -0.32
SF3B2-202ENST00000524475 RAB35Q15286 201 aa13.03□□□□□ -0.32
SF3B2-202ENST00000524475 ZSCAN26Q16670 478 aa13.03□□□□□ -0.32
SF3B2-202ENST00000524475 PCK2Q16822 640 aa13.03□□□□□ -0.32
SF3B2-202ENST00000524475 MST1LQ2TV78 715 aa13.03□□□□□ -0.32
SF3B2-202ENST00000524475 KRT80Q6KB66 452 aa13.03□□□□□ -0.32
SF3B2-202ENST00000524475 ZNF774Q6NX45 483 aa13.03□□□□□ -0.32
SF3B2-202ENST00000524475 VASH1Q7L8A9 365 aaPredicted RBP13.03□□□□□ -0.32
SF3B2-202ENST00000524475 PAQR4Q8N4S7 273 aaPredicted RBP13.03□□□□□ -0.32
SF3B2-202ENST00000524475 GJC3Q8NFK1 279 aa13.03□□□□□ -0.32
SF3B2-202ENST00000524475 OR10H5Q8NGA6 315 aa13.03□□□□□ -0.32
SF3B2-202ENST00000524475 TRMT61AQ96FX7 289 aaKnown RBP13.03□□□□□ -0.32
SF3B2-202ENST00000524475 FOXN4Q96NZ1 517 aa13.03□□□□□ -0.32
SF3B2-202ENST00000524475 PKP2Q99959 881 aa13.03□□□□□ -0.32
SF3B2-202ENST00000524475 PRRG3Q9BZD7 231 aa13.03□□□□□ -0.32
SF3B2-202ENST00000524475 HDHD2Q9H0R4 259 aa13.03□□□□□ -0.32
SF3B2-202ENST00000524475 PLK3Q9H4B4 646 aa13.03□□□□□ -0.32
SF3B2-202ENST00000524475 MRPL22Q9NWU5 206 aaKnown RBP13.03□□□□□ -0.32
SF3B2-202ENST00000524475 ITGB1BP2Q9UKP3 347 aa13.03□□□□□ -0.32
SF3B2-202ENST00000524475 CMAHPQ9Y471 501 aa13.03□□□□□ -0.32
SF3B2-202ENST00000524475 FLNAP21333 2647 aaKnown RBP13.02□□□□□ -0.32
SF3B2-202ENST00000524475 H3BSA7 217 aa13.02□□□□□ -0.33
SF3B2-202ENST00000524475 J3QW42 95 aa13.02□□□□□ -0.33
SF3B2-202ENST00000524475 SYNGR3O43761 229 aa13.02□□□□□ -0.33
SF3B2-202ENST00000524475 DOK2O60496 412 aa13.02□□□□□ -0.33
SF3B2-202ENST00000524475 IGFBP5P24593 272 aa13.02□□□□□ -0.33
SF3B2-202ENST00000524475 FMO3P31513 532 aa13.02□□□□□ -0.33
SF3B2-202ENST00000524475 RAD52P43351 418 aa13.02□□□□□ -0.33
SF3B2-202ENST00000524475 UCP2P55851 309 aa13.02□□□□□ -0.33
SF3B2-202ENST00000524475 SNRPD2P62316 118 aaKnown RBP13.02□□□□□ -0.33
SF3B2-202ENST00000524475 PTGES3Q15185 160 aaKnown RBP13.02□□□□□ -0.33
SF3B2-202ENST00000524475 CCDC92Q53HC0 331 aaPredicted RBP13.02□□□□□ -0.33
SF3B2-202ENST00000524475 TEX30Q5JUR7 227 aa13.02□□□□□ -0.33
SF3B2-202ENST00000524475 LINC01590Q5TEZ4 76 aa13.02□□□□□ -0.33
SF3B2-202ENST00000524475 SLC18B1Q6NT16 456 aa13.02□□□□□ -0.33
SF3B2-202ENST00000524475 KRTAP1-3Q8IUG1 177 aa13.02□□□□□ -0.33
SF3B2-202ENST00000524475 MRPL24Q96A35 216 aaKnown RBP13.02□□□□□ -0.33
SF3B2-202ENST00000524475 DCLRE1CQ96SD1 692 aaKnown RBP13.02□□□□□ -0.33
SF3B2-202ENST00000524475 COQ7Q99807 217 aa13.02□□□□□ -0.33
SF3B2-202ENST00000524475 GABARAPL3Q9BY60 117 aa13.02□□□□□ -0.33
SF3B2-202ENST00000524475 SEMA6AQ9H2E6 1030 aa13.02□□□□□ -0.33
SF3B2-202ENST00000524475 BARX1Q9HBU1 254 aaPredicted RBP13.02□□□□□ -0.33
SF3B2-202ENST00000524475 PLEK2Q9NYT0 353 aa13.02□□□□□ -0.33
SF3B2-202ENST00000524475 USE1Q9NZ43 259 aa13.02□□□□□ -0.33
SF3B2-202ENST00000524475 POLR1DQ9Y2S0 133 aa13.02□□□□□ -0.33
SF3B2-202ENST00000524475 PMF1-BGLAPU3KQ54 211 aa13.02□□□□□ -0.33
SF3B2-202ENST00000524475 F8P00451 2351 aa13.01□□□□□ -0.33
SF3B2-202ENST00000524475 TMEM129A0AVI4 362 aa13.01□□□□□ -0.33
SF3B2-202ENST00000524475 C5orf49A4QMS7 147 aa13.01□□□□□ -0.33
SF3B2-202ENST00000524475 ZAR1LA6NP61 321 aa13.01□□□□□ -0.33
SF3B2-202ENST00000524475 PRR23D1E9PI22 279 aaPredicted RBP13.01□□□□□ -0.33
SF3B2-202ENST00000524475 PRODHO43272 600 aa13.01□□□□□ -0.33
SF3B2-202ENST00000524475 GPRIN2O60269 458 aa13.01□□□□□ -0.33
SF3B2-202ENST00000524475 GPANK1O95872 356 aa13.01□□□□□ -0.33
SF3B2-202ENST00000524475 PRR23D2P0DMB1 279 aaPredicted RBP13.01□□□□□ -0.33
SF3B2-202ENST00000524475 CCL2P13500 99 aa13.01□□□□□ -0.33
SF3B2-202ENST00000524475 ZNF250P15622 560 aa13.01□□□□□ -0.33
SF3B2-202ENST00000524475 TUBG1P23258 451 aa13.01□□□□□ -0.33
SF3B2-202ENST00000524475 PYCR1P32322 319 aa13.01□□□□□ -0.33
SF3B2-202ENST00000524475 HTR5AP47898 357 aa13.01□□□□□ -0.33
SF3B2-202ENST00000524475 PPOXP50336 477 aa13.01□□□□□ -0.33
SF3B2-202ENST00000524475 ATP5J2P56134 94 aa13.01□□□□□ -0.33
SF3B2-202ENST00000524475 ECH1Q13011 328 aa13.01□□□□□ -0.33
SF3B2-202ENST00000524475 MEP1BQ16820 701 aa13.01□□□□□ -0.33
SF3B2-202ENST00000524475 ARL9Q6T311 187 aa13.01□□□□□ -0.33
SF3B2-202ENST00000524475 PQLC1Q8N2U9 271 aa13.01□□□□□ -0.33
SF3B2-202ENST00000524475 ICA1LQ8NDH6 482 aa13.01□□□□□ -0.33
SF3B2-202ENST00000524475 OR9Q1Q8NGQ5 310 aa13.01□□□□□ -0.33
SF3B2-202ENST00000524475 OR1F12Q8NHA8 337 aa13.01□□□□□ -0.33
SF3B2-202ENST00000524475 ZNRF4Q8WWF5 429 aa13.01□□□□□ -0.33
SF3B2-202ENST00000524475 PTP4A1Q93096 173 aa13.01□□□□□ -0.33
SF3B2-202ENST00000524475 DOK1Q99704 481 aa13.01□□□□□ -0.33
SF3B2-202ENST00000524475 CIB1Q99828 191 aa13.01□□□□□ -0.33
SF3B2-202ENST00000524475 CACNG6Q9BXT2 260 aa13.01□□□□□ -0.33
SF3B2-202ENST00000524475 MARCH7Q9H992 704 aa13.01□□□□□ -0.33
SF3B2-202ENST00000524475 ELOVL3Q9HB03 270 aa13.01□□□□□ -0.33
SF3B2-202ENST00000524475 TUBG2Q9NRH3 451 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms