RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 HAVCR2Q8TDQ0 301 aa11.47□□□□□ -0.57
CPNE3-205ENST00000522240 ST7LQ8TDW4 575 aa11.47□□□□□ -0.57
CPNE3-205ENST00000522240 BOD1Q96IK1 185 aa11.47□□□□□ -0.57
CPNE3-205ENST00000522240 ZNF416Q9BWM5 594 aa11.47□□□□□ -0.57
CPNE3-205ENST00000522240 CDADC1Q9BWV3 514 aa11.47□□□□□ -0.57
CPNE3-205ENST00000522240 PIGMQ9H3S5 423 aa11.47□□□□□ -0.57
CPNE3-205ENST00000522240 C1orf198Q9H425 327 aa11.47□□□□□ -0.57
CPNE3-205ENST00000522240 EMC7Q9NPA0 242 aa11.47□□□□□ -0.57
CPNE3-205ENST00000522240 KLHDC2Q9Y2U9 406 aa11.47□□□□□ -0.57
CPNE3-205ENST00000522240 LHFPL6Q9Y693 200 aa11.47□□□□□ -0.57
CPNE3-205ENST00000522240 TRGV8A0A0C4DH27 118 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 SULT1C4O75897 302 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 ABHD16AO95870 558 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 MT-ND5P03915 603 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 LCKP06239 509 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 ITGA5P08648 1049 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 OR8G3PP0DMU2 310 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 B4GALT1P15291 398 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 TTKP33981 857 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 RPS27P42677 84 aaKnown RBP11.46□□□□□ -0.57
CPNE3-205ENST00000522240 HCCSP53701 268 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 TAS2R43P59537 309 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 PCBD1P61457 104 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 ARF1P84077 181 aaKnown RBP11.46□□□□□ -0.57
CPNE3-205ENST00000522240 TGFBR3Q03167 851 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 ACSM1Q08AH1 577 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 PMPCAQ10713 525 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 MLLT11Q13015 90 aaPredicted RBP11.46□□□□□ -0.57
CPNE3-205ENST00000522240 MRPL28Q13084 256 aaKnown RBP11.46□□□□□ -0.57
CPNE3-205ENST00000522240 EIF2B1Q14232 305 aaKnown RBP11.46□□□□□ -0.57
CPNE3-205ENST00000522240 ZNF684Q5T5D7 378 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 DEGS2Q6QHC5 323 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 ZNF813Q6ZN06 617 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 BEND4Q6ZU67 534 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 RHOUQ7L0Q8 258 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 FAM220AQ7Z4H9 259 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 DCXRQ7Z4W1 244 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 KCTD20Q7Z5Y7 419 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 DPPA2Q7Z7J5 298 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 ZGRF1Q86YA3 2104 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 C1orf162Q8NEQ5 155 aaPredicted RBP11.46□□□□□ -0.57
CPNE3-205ENST00000522240 OR1K1Q8NGR3 316 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 OR2AJ1Q8NGZ0 328 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 SMAP2Q8WU79 429 aaPredicted RBP11.46□□□□□ -0.57
CPNE3-205ENST00000522240 SNX33Q8WV41 574 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 RNF133Q8WVZ7 376 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 COG8Q96MW5 612 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 OR5M11Q96RB7 305 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 OR8B4Q96RC9 309 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 ABHD6Q9BV23 337 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 ASH2LQ9UBL3 628 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 ZNF629Q9UEG4 869 aaPredicted RBP11.46□□□□□ -0.57
CPNE3-205ENST00000522240 GDF2Q9UK05 429 aaPredicted RBP11.46□□□□□ -0.57
CPNE3-205ENST00000522240 MEMO1Q9Y316 297 aa11.46□□□□□ -0.57
CPNE3-205ENST00000522240 A0A0G2JNJ9 132 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 METTL15A6NJ78 407 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 ZNF878C9JN71 531 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 MSTNO14793 375 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 ZNF254O75437 659 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 SEC14L2O76054 403 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 KRT8P05787 483 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 PSMB9P28065 219 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 GP2P55259 537 aaKnown RBP11.45□□□□□ -0.58
CPNE3-205ENST00000522240 HIST1H3AP68431 136 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 SCRN3Q0VDG4 424 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 P2RY6Q15077 328 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 MED22Q15528 200 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 HIST2H3PS2Q5TEC6 136 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 OR2G6Q5TZ20 316 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 OTPQ5XKR4 325 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 ANKRD16Q6P6B7 361 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 KLHL24Q6TFL4 600 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 HIST2H3AQ71DI3 136 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 LINC00346Q8IVM7 164 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 ZNF679Q8IYX0 411 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 GABRG1Q8N1C3 465 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 GALNT11Q8NCW6 608 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 GJC3Q8NFK1 279 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 THEM6Q8WUY1 208 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 SPRYD4Q8WW59 207 aaPredicted RBP11.45□□□□□ -0.58
CPNE3-205ENST00000522240 RND1Q92730 232 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 C4orf36Q96KX1 117 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 AMELYQ99218 206 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 KCNN2Q9H2S1 579 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 TRIM36Q9NQ86 728 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 BATF3Q9NR55 127 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 Q9UFV3 132 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 ATPIF1Q9UII2 106 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 SH3BGRL2Q9UJC5 107 aa11.45□□□□□ -0.58
CPNE3-205ENST00000522240 FREM1Q5H8C1 2179 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 SPTAN1Q13813 2472 aaKnown RBP11.44□□□□□ -0.58
CPNE3-205ENST00000522240 PRR32B1ATL7 298 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 DVL2O14641 736 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 INMTO95050 263 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 TACSTD2P09758 323 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 IGHV1-2P23083 117 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 CD79BP40259 229 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 FOXG1P55316 489 aaPredicted RBP11.44□□□□□ -0.58
CPNE3-205ENST00000522240 RAB39AQ14964 217 aa11.44□□□□□ -0.58
CPNE3-205ENST00000522240 TIGD6Q17RP2 521 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms