RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 PIP5K1CO60331 668 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 LIPCP11150 499 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 NME2P22392 152 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 HTR2CP28335 458 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 GABRA2P47869 451 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 CCR6P51684 374 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 IHHQ14623 411 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 WDR88Q6ZMY6 472 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 NKAIN4Q8IVV8 208 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 CNRIP1Q96F85 164 aaPredicted RBP14.75□□□□□ -0.05
USP42-207ENST00000521713 NIPSNAP1Q9BPW8 284 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 C12orf49Q9H741 205 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 FKRPQ9H9S5 495 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 TAS2R16Q9NYV7 291 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 DUSP13Q9UII6 198 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 TP53TG5Q9Y2B4 290 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 PCDHGA5Q9Y5G8 931 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 TNFSF14O43557 240 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 MCM3APO60318 1980 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 SIX6O95475 246 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 HSF1Q00613 529 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 ZNF74Q16587 644 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 MEP1BQ16820 701 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 EMC4Q5J8M3 183 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 C1orf87Q8N0U7 546 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 A0A0A6YYD5 115 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 CBR3O75828 277 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 CLEC2LP0C7M8 214 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 CALCBP10092 127 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 CPEP16870 476 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 RFX2P48378 723 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 SNTB1Q13884 538 aaKnown RBP14.75□□□□□ -0.05
USP42-207ENST00000521713 CLLU1Q5K131 121 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 ZNF808Q8N4W9 903 aaPredicted RBP14.75□□□□□ -0.05
USP42-207ENST00000521713 FAM213BQ8TBF2 198 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 UPRTQ96BW1 309 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 COX14Q96I36 57 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 LRFN5Q96NI6 719 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 EXOSC3Q9NQT5 275 aaKnown RBP14.75□□□□□ -0.05
USP42-207ENST00000521713 PPM1DO15297 605 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 ICOSLGO75144 302 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 OR7C1O76099 320 aaPredicted RBP14.75□□□□□ -0.05
USP42-207ENST00000521713 NFYBP25208 207 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 SLC9A3R2Q15599 337 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 LAIR1Q6GTX8 287 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 ZNF511Q8NB15 262 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 ZBTB44Q8NCP5 570 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 MED18Q9BUE0 208 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 SCPEP1Q9HB40 452 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 STEAP1Q9UHE8 339 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 TRAPPC4Q9Y296 219 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 BRWD3Q6RI45 1802 aa14.75□□□□□ -0.05
USP42-207ENST00000521713 SNRPGP15A8MWD9 76 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 DFFBO76075 338 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 MT-ND4LP03901 98 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 RAB4AP20338 218 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 EXOSC2Q13868 293 aaKnown RBP14.74□□□□□ -0.05
USP42-207ENST00000521713 EBPQ15125 230 aaKnown RBP14.74□□□□□ -0.05
USP42-207ENST00000521713 MSMO1Q15800 293 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 AANATQ16613 207 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 ZNF628Q5EBL2 1059 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 ABI3BPQ7Z7G0 1075 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 TOX3O15405 576 aaPredicted RBP14.74□□□□□ -0.05
USP42-207ENST00000521713 KLK10O43240 276 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 FCMRO60667 390 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 CBX7O95931 251 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 CTU2Q2VPK5 515 aaKnown RBP14.74□□□□□ -0.05
USP42-207ENST00000521713 ZMAT1Q5H9K5 638 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 ZBTB37Q5TC79 503 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 FBXW12Q6X9E4 464 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 LINC00346Q8IVM7 164 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 DEFB124Q8NES8 71 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 OR10R2Q8NGX6 335 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 TGIF2Q9GZN2 237 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 OR14J1Q9UGF5 321 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 A0A087WUU8 490 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 MCRIP1C9JLW8 97 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 NAGAP17050 411 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 POU3F3P20264 500 aaPredicted RBP14.74□□□□□ -0.05
USP42-207ENST00000521713 THBS3P49746 956 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 BDH1Q02338 343 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 EXOSC6Q5RKV6 272 aaKnown RBP14.74□□□□□ -0.05
USP42-207ENST00000521713 ZNF705AQ6ZN79 300 aaPredicted RBP14.74□□□□□ -0.05
USP42-207ENST00000521713 SH2D5Q6ZV89 423 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 ESPNLQ6ZVH7 1005 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.74□□□□□ -0.05
USP42-207ENST00000521713 ZNF561Q8N587 486 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 FAM26EQ8N5C1 309 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 EXD3Q8N9H8 876 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 OR4D9Q8NGE8 314 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 KCNG3Q8TAE7 436 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 TMEM106AQ96A25 262 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 SPACA9Q96E40 222 aaPredicted RBP14.74□□□□□ -0.05
USP42-207ENST00000521713 WWTR1Q9GZV5 400 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 RNF32Q9H0A6 362 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 ZNF286AQ9HBT8 521 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 NOX4Q9NPH5 578 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 TRAV17A0A0B4J275 112 aa14.74□□□□□ -0.05
USP42-207ENST00000521713 CRYABP02511 175 aaKnown RBP14.74□□□□□ -0.05
USP42-207ENST00000521713 TCTN3Q6NUS6 607 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms