RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 HNRNPA0Q13151 305 aaKnown RBP10.53□□□□□ -0.72
CSMD1-205ENST00000519623 MESTQ5EB52 335 aa10.53□□□□□ -0.72
CSMD1-205ENST00000519623 SHQ1Q6PI26 577 aaKnown RBP10.53□□□□□ -0.72
CSMD1-205ENST00000519623 FKBP9P1Q75LS8 142 aa10.53□□□□□ -0.72
CSMD1-205ENST00000519623 TREML1Q86YW5 311 aa10.53□□□□□ -0.72
CSMD1-205ENST00000519623 DIRC2Q96SL1 478 aa10.53□□□□□ -0.72
CSMD1-205ENST00000519623 EGLN1Q9GZT9 426 aa10.53□□□□□ -0.72
CSMD1-205ENST00000519623 ANKRD19PQ9H560 264 aa10.53□□□□□ -0.72
CSMD1-205ENST00000519623 TBCCD1Q9NVR7 557 aa10.53□□□□□ -0.72
CSMD1-205ENST00000519623 CGGBP1Q9UFW8 167 aaPredicted RBP10.53□□□□□ -0.72
CSMD1-205ENST00000519623 NDRG4Q9ULP0 352 aaKnown RBP10.53□□□□□ -0.72
CSMD1-205ENST00000519623 STARD10Q9Y365 291 aa10.53□□□□□ -0.72
CSMD1-205ENST00000519623 ENPP4Q9Y6X5 453 aa10.53□□□□□ -0.72
CSMD1-205ENST00000519623 A0A0G2JMP0 313 aa10.52□□□□□ -0.73
CSMD1-205ENST00000519623 A0A0X1KG70 313 aa10.52□□□□□ -0.73
CSMD1-205ENST00000519623 HAX1O00165 279 aa10.52□□□□□ -0.73
CSMD1-205ENST00000519623 CCDC22O60826 627 aa10.52□□□□□ -0.73
CSMD1-205ENST00000519623 NCK1P16333 377 aa10.52□□□□□ -0.73
CSMD1-205ENST00000519623 CTLA4P16410 223 aa10.52□□□□□ -0.73
CSMD1-205ENST00000519623 TUBG1P23258 451 aa10.52□□□□□ -0.73
CSMD1-205ENST00000519623 RBMXP38159 391 aaKnown RBP10.52□□□□□ -0.73
CSMD1-205ENST00000519623 MTX3Q5HYI7 312 aa10.52□□□□□ -0.73
CSMD1-205ENST00000519623 ARL9Q6T311 187 aa10.52□□□□□ -0.73
CSMD1-205ENST00000519623 HACD2Q6Y1H2 254 aa10.52□□□□□ -0.73
CSMD1-205ENST00000519623 Q6ZR03 302 aa10.52□□□□□ -0.73
CSMD1-205ENST00000519623 USP43Q70EL4 1123 aa10.52□□□□□ -0.73
CSMD1-205ENST00000519623 VASH1Q7L8A9 365 aaPredicted RBP10.52□□□□□ -0.73
CSMD1-205ENST00000519623 RRM2BQ7LG56 351 aa10.52□□□□□ -0.73
CSMD1-205ENST00000519623 OR4M2Q8NGB6 313 aa10.52□□□□□ -0.73
CSMD1-205ENST00000519623 NRIP3Q9NQ35 241 aa10.52□□□□□ -0.73
CSMD1-205ENST00000519623 TUBG2Q9NRH3 451 aa10.52□□□□□ -0.73
CSMD1-205ENST00000519623 DCAF16Q9NXF7 216 aa10.52□□□□□ -0.73
CSMD1-205ENST00000519623 OPN4Q9UHM6 478 aa10.52□□□□□ -0.73
CSMD1-205ENST00000519623 PCDHB10Q9UN67 800 aa10.52□□□□□ -0.73
CSMD1-205ENST00000519623 SIGLEC7Q9Y286 467 aa10.52□□□□□ -0.73
CSMD1-205ENST00000519623 TEX13CA0A0J9YWL9 993 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 A0A1W2PRQ8 180 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 J3QLI3 93 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 XKRYO14609 159 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 IMPA2O14732 288 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 SGCEO43556 437 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 TIMM8AO60220 97 aaPredicted RBP10.51□□□□□ -0.73
CSMD1-205ENST00000519623 RGS9O75916 674 aaPredicted RBP10.51□□□□□ -0.73
CSMD1-205ENST00000519623 ABHD16AO95870 558 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 ADRA2CP18825 462 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 KITLGP21583 273 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 EPHA1P21709 976 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 ZFP36P26651 326 aaKnown RBP10.51□□□□□ -0.73
CSMD1-205ENST00000519623 MDH1P40925 334 aaKnown RBP10.51□□□□□ -0.73
CSMD1-205ENST00000519623 OMPP47874 163 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 LIMS1P48059 325 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 FXYD6P3P58550 94 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 HILS1P60008 231 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 TNFAIP6P98066 277 aaPredicted RBP10.51□□□□□ -0.73
CSMD1-205ENST00000519623 SLC3A1Q07837 685 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 SCRN3Q0VDG4 424 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 SCGB2A2Q13296 93 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 DGCR6Q14129 220 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 DCAF12L2Q5VW00 463 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 OTPQ5XKR4 325 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 C1QL2Q7Z5L3 287 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 ZER1Q7Z7L7 766 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 TEX29Q8N6K0 151 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 ZNF418Q8TF45 676 aaPredicted RBP10.51□□□□□ -0.73
CSMD1-205ENST00000519623 RASD2Q96D21 266 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 HAVCR1Q96D42 359 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 CMBLQ96DG6 245 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 FAM46AQ96IP4 442 aaKnown RBP10.51□□□□□ -0.73
CSMD1-205ENST00000519623 C7orf34Q96L11 122 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 ZNF570Q96NI8 536 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 GPX7Q96SL4 187 aaPredicted RBP10.51□□□□□ -0.73
CSMD1-205ENST00000519623 GAL3ST1Q99999 423 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 VSX1Q9NZR4 365 aaPredicted RBP10.51□□□□□ -0.73
CSMD1-205ENST00000519623 NDUFAF4Q9P032 175 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 ABCD2Q9UBJ2 740 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 PURGQ9UJV8 347 aaKnown RBP10.51□□□□□ -0.73
CSMD1-205ENST00000519623 TMEM5Q9Y2B1 443 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 COA3Q9Y2R0 106 aaPredicted RBP10.51□□□□□ -0.73
CSMD1-205ENST00000519623 NPTNQ9Y639 398 aa10.51□□□□□ -0.73
CSMD1-205ENST00000519623 OR6C6A6NF89 314 aa10.5□□□□□ -0.73
CSMD1-205ENST00000519623 NDUFAB1O14561 156 aa10.5□□□□□ -0.73
CSMD1-205ENST00000519623 DOK2O60496 412 aa10.5□□□□□ -0.73
CSMD1-205ENST00000519623 SLC16A7O60669 478 aa10.5□□□□□ -0.73
CSMD1-205ENST00000519623 NDUFB2O95178 105 aa10.5□□□□□ -0.73
CSMD1-205ENST00000519623 IGHV2-70P01814 119 aa10.5□□□□□ -0.73
CSMD1-205ENST00000519623 H1F0P07305 194 aaKnown RBP10.5□□□□□ -0.73
CSMD1-205ENST00000519623 SBK2P0C263 348 aa10.5□□□□□ -0.73
CSMD1-205ENST00000519623 RHCEP18577 417 aa10.5□□□□□ -0.73
CSMD1-205ENST00000519623 GSTM3P21266 225 aa10.5□□□□□ -0.73
CSMD1-205ENST00000519623 GATA3P23771 443 aa10.5□□□□□ -0.73
CSMD1-205ENST00000519623 CFPP27918 469 aa10.5□□□□□ -0.73
CSMD1-205ENST00000519623 SDHAP31040 664 aa10.5□□□□□ -0.73
CSMD1-205ENST00000519623 HTR5AP47898 357 aa10.5□□□□□ -0.73
CSMD1-205ENST00000519623 PSME3P61289 254 aa10.5□□□□□ -0.73
CSMD1-205ENST00000519623 LSM6P62312 80 aaKnown RBP10.5□□□□□ -0.73
CSMD1-205ENST00000519623 LCN2P80188 198 aa10.5□□□□□ -0.73
CSMD1-205ENST00000519623 KRR1Q13601 381 aaKnown RBP10.5□□□□□ -0.73
CSMD1-205ENST00000519623 SEC23BQ15437 767 aa10.5□□□□□ -0.73
CSMD1-205ENST00000519623 KCNMB1Q16558 191 aa10.5□□□□□ -0.73
CSMD1-205ENST00000519623 CCDC92Q53HC0 331 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms