RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 CHST1O43916 411 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 FKBP6O75344 327 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 OR2F2O95006 317 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 YIF1AO95070 293 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 H6PDO95479 791 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 SERPINE2P07093 398 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 ACSM4P0C7M7 580 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 CT45A6P0DMU7 189 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 CT45A5P0DMU8 189 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 CT45A7P0DMV0 189 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 MYL2P10916 166 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 MUC1P15941 1255 aaPredicted RBP2.6□□□□□ -1.99
SQLE-202ENST00000518604 TCN2P20062 427 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 RAB3AP20336 220 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 KRTAP10-8P60410 259 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 UBE2NP61088 152 aaKnown RBP2.6□□□□□ -1.99
SQLE-202ENST00000518604 SYCNQ0VAF6 134 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 CHRNA6Q15825 494 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 CHRFAM7AQ494W8 412 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 ABCA11PQ4W5N1 156 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 ORMDL2Q53FV1 153 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 HSP90AB3PQ58FF7 597 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 CT45A1Q5HYN5 189 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 PRAMEF20Q5VT98 475 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 METTL21CQ5VZV1 264 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 DNAJC24Q6P3W2 148 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 CEMP1Q6PRD7 247 aaPredicted RBP2.6□□□□□ -1.99
SQLE-202ENST00000518604 CMC1Q7Z7K0 106 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 WDR86Q86TI4 376 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 OR5B3Q8NH48 314 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 CT45A3Q8NHU0 189 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 C15orf40Q8WUR7 153 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 NARS2Q96I59 477 aaKnown RBP2.6□□□□□ -1.99
SQLE-202ENST00000518604 OR5B12Q96R08 314 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 FAM192AQ9GZU8 254 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 C12orf10Q9HB07 376 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 MTCH1Q9NZJ7 389 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 VANGL2Q9ULK5 521 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 RFNGQ9Y644 331 aa2.6□□□□□ -1.99
SQLE-202ENST00000518604 COL22A1Q8NFW1 1626 aaPredicted RBP2.6□□□□□ -1.99
SQLE-202ENST00000518604 TMEM223A0PJW6 202 aa2.59□□□□□ -1.99
SQLE-202ENST00000518604 OR6C74A6NCV1 312 aa2.59□□□□□ -1.99
SQLE-202ENST00000518604 SMKR1H3BMG3 65 aa2.59□□□□□ -1.99
SQLE-202ENST00000518604 H7C0C1 242 aa2.59□□□□□ -1.99
SQLE-202ENST00000518604 LSM1O15116 133 aaKnown RBP2.59□□□□□ -1.99
SQLE-202ENST00000518604 EIF4E2O60573 245 aaKnown RBP2.59□□□□□ -1.99
SQLE-202ENST00000518604 CLDN11O75508 207 aa2.59□□□□□ -1.99
SQLE-202ENST00000518604 UBTFL6P0CB48 400 aaPredicted RBP2.59□□□□□ -1.99
SQLE-202ENST00000518604 DTYMKP23919 212 aa2.59□□□□□ -1.99
SQLE-202ENST00000518604 CEACAM3P40198 252 aa2.59□□□□□ -1.99
SQLE-202ENST00000518604 ATP5OP48047 213 aa2.59□□□□□ -1.99
SQLE-202ENST00000518604 MRPL19P49406 292 aaKnown RBP2.59□□□□□ -1.99
SQLE-202ENST00000518604 RND2P52198 227 aa2.59□□□□□ -1.99
SQLE-202ENST00000518604 CDH17Q12864 832 aa2.59□□□□□ -1.99
SQLE-202ENST00000518604 RCN1Q15293 331 aa2.59□□□□□ -1.99
SQLE-202ENST00000518604 ZNF726P1Q15940 193 aa2.59□□□□□ -1.99
SQLE-202ENST00000518604 MRPL23Q16540 153 aaKnown RBP2.59□□□□□ -1.99
SQLE-202ENST00000518604 FAM78AQ5JUQ0 283 aa2.59□□□□□ -1.99
SQLE-202ENST00000518604 SPANXN2Q5MJ10 180 aa2.59□□□□□ -1.99
SQLE-202ENST00000518604 NPSR1Q6W5P4 371 aa2.59□□□□□ -1.99
SQLE-202ENST00000518604 RIMKLAQ8IXN7 391 aa2.59□□□□□ -1.99
SQLE-202ENST00000518604 CMTM1Q8IZ96 169 aa2.59□□□□□ -1.99
SQLE-202ENST00000518604 COQ8AQ8NI60 647 aa2.59□□□□□ -1.99
SQLE-202ENST00000518604 FAM81AQ8TBF8 368 aa2.59□□□□□ -1.99
SQLE-202ENST00000518604 TSEN15Q8WW01 171 aaKnown RBP2.59□□□□□ -1.99
SQLE-202ENST00000518604 DEDD2Q8WXF8 326 aa2.59□□□□□ -1.99
SQLE-202ENST00000518604 RNF157Q96PX1 679 aa2.59□□□□□ -1.99
SQLE-202ENST00000518604 CAMK2N2Q96S95 79 aa2.59□□□□□ -1.99
SQLE-202ENST00000518604 ZNF382Q96SR6 550 aa2.59□□□□□ -1.99
SQLE-202ENST00000518604 MICU1Q9BPX6 476 aa2.59□□□□□ -1.99
SQLE-202ENST00000518604 RSPO3Q9BXY4 272 aaPredicted RBP2.59□□□□□ -1.99
SQLE-202ENST00000518604 TMEM185BQ9H7F4 350 aa2.59□□□□□ -1.99
SQLE-202ENST00000518604 ANKRA2Q9H9E1 313 aa2.59□□□□□ -1.99
SQLE-202ENST00000518604 ZNF160Q9HCG1 818 aa2.59□□□□□ -1.99
SQLE-202ENST00000518604 TMEM9BQ9NQ34 198 aa2.59□□□□□ -1.99
SQLE-202ENST00000518604 RAB20Q9NX57 234 aa2.59□□□□□ -1.99
SQLE-202ENST00000518604 TRMT112Q9UI30 125 aaKnown RBP2.59□□□□□ -1.99
SQLE-202ENST00000518604 HYOU1Q9Y4L1 999 aa2.59□□□□□ -1.99
SQLE-202ENST00000518604 NINLQ9Y2I6 1382 aa2.59□□□□□ -2
SQLE-202ENST00000518604 PIKFYVEQ9Y2I7 2098 aa2.59□□□□□ -2
SQLE-202ENST00000518604 COL4A4P53420 1690 aaPredicted RBP2.58□□□□□ -2
SQLE-202ENST00000518604 A0A075B6Q4 140 aa2.58□□□□□ -2
SQLE-202ENST00000518604 IGLV1-36A0A0B4J1U3 117 aa2.58□□□□□ -2
SQLE-202ENST00000518604 A0A0U1RQV1 116 aa2.58□□□□□ -2
SQLE-202ENST00000518604 SPRR5A0A1B0GTR4 108 aa2.58□□□□□ -2
SQLE-202ENST00000518604 SCAMP2O15127 329 aaKnown RBP2.58□□□□□ -2
SQLE-202ENST00000518604 RAD51BO15315 384 aa2.58□□□□□ -2
SQLE-202ENST00000518604 RBFOX2O43251 390 aaKnown RBP eCLIP2.58□□□□□ -2
SQLE-202ENST00000518604 HUS1O60921 280 aa2.58□□□□□ -2
SQLE-202ENST00000518604 CD3GP09693 182 aa2.58□□□□□ -2
SQLE-202ENST00000518604 ATF6P18850 670 aa2.58□□□□□ -2
SQLE-202ENST00000518604 SSTR5P35346 364 aa2.58□□□□□ -2
SQLE-202ENST00000518604 BEX3Q00994 111 aa2.58□□□□□ -2
SQLE-202ENST00000518604 SP4Q02446 784 aa2.58□□□□□ -2
SQLE-202ENST00000518604 TGM3Q08188 693 aa2.58□□□□□ -2
SQLE-202ENST00000518604 SHHQ15465 462 aa2.58□□□□□ -2
SQLE-202ENST00000518604 HSDL1Q3SXM5 330 aa2.58□□□□□ -2
SQLE-202ENST00000518604 SOHLH1Q5JUK2 328 aa2.58□□□□□ -2
SQLE-202ENST00000518604 AVPI1Q5T686 147 aa2.58□□□□□ -2
SQLE-202ENST00000518604 PRMT9Q6P2P2 845 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms