RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 ZSWIM7Q19AV6 140 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 OR4C11Q6IEV9 310 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 OLIG3Q7RTU3 272 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 B3GNT7Q8NFL0 401 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 OR5D16Q8NGK9 328 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 FAM222BQ8WU58 562 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 LCN9Q8WX39 176 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 KLK6Q92876 244 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 RGMAQ96B86 450 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 SAT2Q96F10 170 aaPredicted RBP6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 UTP23Q9BRU9 249 aaKnown RBP6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 RHOFQ9HBH0 211 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 KCNK6Q9Y257 313 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 ADAM18Q9Y3Q7 739 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 COLEC10Q9Y6Z7 277 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 A0A1W2PQL4 384 aaPredicted RBP6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 A0A1W2PS29 197 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 OR5H15A6NDH6 313 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 OR5H1A6NKK0 313 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 F6UZH7 168 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 CLEC3AO75596 197 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 STATHP02808 62 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 NID1P14543 1247 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 EPHA1P21709 976 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 PTGER1P34995 402 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 RAB28P51157 221 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 CRYBA4P53673 196 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 RIPPLY3P57055 190 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 ZNF660Q6AZW8 331 aaPredicted RBP6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 VASH2Q86V25 355 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 CYB561A3Q8NBI2 242 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 SUN3Q8TAQ9 357 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 EDAQ92838 391 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 MRGPRFQ96AM1 343 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 MACROD1Q9BQ69 325 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 MRPL13Q9BYD1 178 aaKnown RBP6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 TBL1XR1Q9BZK7 514 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 CENPMQ9NSP4 180 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 A4GNTQ9UNA3 340 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 SLC17A4Q9Y2C5 497 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 HIF3AQ9Y2N7 669 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 YBX2Q9Y2T7 364 aaKnown RBP6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 SCN3AQ9NY46 2000 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 OR52A4PA6NMU1 304 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 MCRIP1C9JLW8 97 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 H0Y8G0 127 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 MAN2B1O00754 1011 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 TPST2O60704 377 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 SNAPC5O75971 98 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 CDRT1O95170 752 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 HLA-DQB1P01920 261 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 TFP02787 698 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 EN2P19622 333 aaPredicted RBP6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 CNR2P34972 360 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 IGFALSP35858 605 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 ARR3P36575 388 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 PMELP40967 661 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 TNFSF10P50591 281 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 F2RL1P55085 397 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 SNRPNP63162 240 aaKnown RBP6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 MELKQ14680 651 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 C9orf50Q5SZB4 431 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 MRM1Q6IN84 353 aaKnown RBP6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 TRAT1Q6PIZ9 186 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 C19orf48Q6RUI8 117 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 HDDC3Q8N4P3 179 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 SLC6A18Q96N87 628 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 CNTNAP3BQ96NU0 1288 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 TIMM29Q9BSF4 260 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 GPR87Q9BY21 358 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 OR51I1Q9H343 314 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 SLC25A19Q9HC21 320 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 EXOSC3Q9NQT5 275 aaKnown RBP6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 CYSLTR2Q9NS75 346 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 CLDN16Q9Y5I7 305 aa6.77□□□□□ -1.33
PDLIM5-219ENST00000514743 G3V3Q6 166 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 K7EQS6 105 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 GLCEO94923 617 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 GKN3PP0CG01 181 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 OR12D1P0DN82 309 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 DRD1P21728 446 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 PTGER4P35408 488 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 KIR2DL1P43626 348 aaPredicted RBP6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 SELENOPP49908 381 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 EMP2P54851 167 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 ARF6P62330 175 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 BTG2P78543 158 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 IL18Q14116 193 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 HERPUD1Q15011 391 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 TMEM201Q5SNT2 666 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 ZNF705AQ6ZN79 300 aaPredicted RBP6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 BOD1L2Q8IYS8 172 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 ZFP41Q8N8Y5 198 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 OR52E1Q8NGJ3 308 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 FGF14Q92915 247 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 MS4A6EQ96DS6 147 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 ABHD1Q96SE0 405 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 KXD1Q9BQD3 176 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 WWTR1Q9GZV5 400 aa6.76□□□□□ -1.33
PDLIM5-219ENST00000514743 DOK5Q9P104 306 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms