RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 CTAGE6Q86UF2 777 aa2.93□□□□□ -1.94
HMGCS1-207ENST00000514610 OR10AD1Q8NGE0 317 aa2.93□□□□□ -1.94
HMGCS1-207ENST00000514610 NUBPLQ8TB37 319 aa2.93□□□□□ -1.94
HMGCS1-207ENST00000514610 CAPSLQ8WWF8 208 aa2.93□□□□□ -1.94
HMGCS1-207ENST00000514610 C20orf24Q9BUV8 137 aa2.93□□□□□ -1.94
HMGCS1-207ENST00000514610 ZNF160Q9HCG1 818 aa2.93□□□□□ -1.94
HMGCS1-207ENST00000514610 SIRT7Q9NRC8 400 aa2.93□□□□□ -1.94
HMGCS1-207ENST00000514610 CABIN1Q9Y6J0 2220 aa2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 IGLV1-50A0A075B6I6 118 aa2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 TRBV9A0A0B4J1U6 114 aa2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 K7EMT4 169 aa2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 DNALI1O14645 258 aaPredicted RBP2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 ZNF207O43670 478 aaKnown RBP2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 EIF4E2O60573 245 aaKnown RBP2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 FKBP6O75344 327 aa2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 GCM2O75603 506 aaPredicted RBP2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 OR2F2O95006 317 aa2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 H6PDO95479 791 aa2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 SERPINE2P07093 398 aa2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 ADRA2AP08913 450 aa2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 UBTFL6P0CB48 400 aaPredicted RBP2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 CUL2Q13617 745 aa2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 XKR4Q5GH76 650 aa2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 PRMT9Q6P2P2 845 aa2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 METAP1DQ6UB28 335 aaPredicted RBP2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 TMEM150AQ86TG1 271 aa2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 SYNPRQ8TBG9 265 aa2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 C15orf40Q8WUR7 153 aa2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 RBMXL1Q96E39 390 aaKnown RBP2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 GALNT14Q96FL9 552 aa2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 TGS1Q96RS0 853 aaKnown RBP2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 FAM192AQ9GZU8 254 aa2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 SPNS1Q9H2V7 528 aa2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 TMEM185BQ9H7F4 350 aa2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 WFDC1Q9HC57 220 aa2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 NEK6Q9HC98 313 aa2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 HMG20AQ9NP66 347 aa2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 ZDHHC4Q9NPG8 344 aa2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 PTTG3PQ9NZH4 202 aa2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 ZNRD1Q9P1U0 126 aa2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 TNS2Q63HR2 1409 aa2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 ADAMTS13Q76LX8 1427 aa2.92□□□□□ -1.94
HMGCS1-207ENST00000514610 SPRR5A0A1B0GTR4 108 aa2.91□□□□□ -1.94
HMGCS1-207ENST00000514610 A0A1B0GW55 424 aa2.91□□□□□ -1.94
HMGCS1-207ENST00000514610 SMKR1H3BMG3 65 aa2.91□□□□□ -1.94
HMGCS1-207ENST00000514610 L7N2F9 121 aa2.91□□□□□ -1.94
HMGCS1-207ENST00000514610 SCAMP2O15127 329 aaKnown RBP2.91□□□□□ -1.94
HMGCS1-207ENST00000514610 CLDN11O75508 207 aa2.91□□□□□ -1.94
HMGCS1-207ENST00000514610 KRT14P02533 472 aa2.91□□□□□ -1.94
HMGCS1-207ENST00000514610 DUX4L2P0CJ85 424 aa2.91□□□□□ -1.94
HMGCS1-207ENST00000514610 DUX4L3P0CJ86 424 aa2.91□□□□□ -1.94
HMGCS1-207ENST00000514610 DUX4L5P0CJ88 424 aa2.91□□□□□ -1.94
HMGCS1-207ENST00000514610 DUX4L6P0CJ89 424 aa2.91□□□□□ -1.94
HMGCS1-207ENST00000514610 DUX4L7P0CJ90 424 aa2.91□□□□□ -1.94
HMGCS1-207ENST00000514610 MUC1P15941 1255 aaPredicted RBP2.91□□□□□ -1.94
HMGCS1-207ENST00000514610 OTX1P32242 354 aaPredicted RBP2.91□□□□□ -1.94
HMGCS1-207ENST00000514610 STXBP1P61764 594 aaKnown RBP2.91□□□□□ -1.94
HMGCS1-207ENST00000514610 SP4Q02446 784 aa2.91□□□□□ -1.94
HMGCS1-207ENST00000514610 LIPEQ05469 1076 aa2.91□□□□□ -1.94
HMGCS1-207ENST00000514610 CDH17Q12864 832 aa2.91□□□□□ -1.94
HMGCS1-207ENST00000514610 ZNF684Q5T5D7 378 aa2.91□□□□□ -1.94
HMGCS1-207ENST00000514610 FBXW9Q5XUX1 488 aa2.91□□□□□ -1.94
HMGCS1-207ENST00000514610 BBS5Q8N3I7 341 aa2.91□□□□□ -1.94
HMGCS1-207ENST00000514610 NRGNQ92686 78 aa2.91□□□□□ -1.94
HMGCS1-207ENST00000514610 ESR2Q92731 530 aa2.91□□□□□ -1.94
HMGCS1-207ENST00000514610 TMEM165Q9HC07 324 aa2.91□□□□□ -1.94
HMGCS1-207ENST00000514610 RETNQ9HD89 108 aa2.91□□□□□ -1.94
HMGCS1-207ENST00000514610 MTCH1Q9NZJ7 389 aa2.91□□□□□ -1.94
HMGCS1-207ENST00000514610 DUX4Q9UBX2 424 aa2.91□□□□□ -1.94
HMGCS1-207ENST00000514610 SLC17A4Q9Y2C5 497 aa2.91□□□□□ -1.94
HMGCS1-207ENST00000514610 ZNF835Q9Y2P0 537 aa2.91□□□□□ -1.94
HMGCS1-207ENST00000514610 TSSC4Q9Y5U2 329 aaPredicted RBP2.91□□□□□ -1.94
HMGCS1-207ENST00000514610 DENND4AQ7Z401 1863 aa2.9□□□□□ -1.94
HMGCS1-207ENST00000514610 NSD2O96028 1365 aa2.9□□□□□ -1.94
HMGCS1-207ENST00000514610 NUP214P35658 2090 aaPredicted RBP2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 A0A0U1RQV1 116 aa2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 TMEM223A0PJW6 202 aa2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 TMEM150BA6NC51 233 aa2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 COLCA2A8K830 154 aa2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 LYRM9A8MSI8 78 aa2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 NDUFAB1O14561 156 aa2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 RBFOX2O43251 390 aaKnown RBP eCLIP2.9□□□□□ -1.956e-7■■■■□ 24
HMGCS1-207ENST00000514610 AGTP01019 485 aa2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 EIF4EP06730 217 aaKnown RBP2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 CD3GP09693 182 aa2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 GGT1P19440 569 aa2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 TCN2P20062 427 aa2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 KIR3DL2P43630 455 aa2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 CX3CR1P49238 355 aa2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 EIF3EP60228 445 aaKnown RBP2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 RPS15P62841 145 aaKnown RBP2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 IRF4Q15306 451 aa2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 SF3A2Q15428 464 aaKnown RBP2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 FAM78AQ5JUQ0 283 aa2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 GPR107Q5VW38 600 aa2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 PRSS58Q8IYP2 241 aa2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 CNPY4Q8N129 248 aa2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 ZNF709Q8N972 641 aa2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 OR4C5Q8NGB2 326 aa2.9□□□□□ -1.95
HMGCS1-207ENST00000514610 NTAN1Q96AB6 310 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms