RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 TRBV5-3A0A0A0MS03 114 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 DCTDP32321 178 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 MVDP53602 400 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 NKAIN1Q4KMZ8 207 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 Q6ZTK2 550 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 MRPL21Q7Z2W9 205 aaKnown RBP11.98□□□□□ -0.49
TCOF1-213ENST00000514442 BAP18Q8IXM2 172 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 KDM8Q8N371 416 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 OR5H2Q8NGV7 314 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 TRIP12Q14669 1992 aaPredicted RBP11.98□□□□□ -0.49
TCOF1-213ENST00000514442 A0A1W2PS29 197 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 RPA2P15927 270 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 CAPZBP47756 277 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 INSL4Q14641 139 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 CA13Q8N1Q1 262 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 ZNF511Q8NB15 262 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 OR6K3Q8NGY3 331 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 C8orf44Q96CB5 159 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 PHYHIPLQ96FC7 376 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 MMP26Q9NRE1 261 aa11.98□□□□□ -0.49
TCOF1-213ENST00000514442 PQLC2LA1A4F0 135 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 MEGF11A6BM72 1044 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 PYCARD-AS1I3L0S3 204 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 HMGB3O15347 200 aaKnown RBP11.97□□□□□ -0.49
TCOF1-213ENST00000514442 NDUFB6O95139 128 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 HLA-DQB1P01920 261 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 CHRM4P08173 479 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 SFTA3P0C7M3 94 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 EPXP11678 715 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 HMGA2P52926 109 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 PDZD11Q5EBL8 140 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 SOHLH1Q5JUK2 328 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 C1orf53Q5VUE5 145 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 DPY19L4Q7Z388 723 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 MRPL41Q8IXM3 137 aaKnown RBP11.97□□□□□ -0.49
TCOF1-213ENST00000514442 SLC2A12Q8TD20 617 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 NANOS1Q8WY41 292 aaKnown RBP11.97□□□□□ -0.49
TCOF1-213ENST00000514442 M0QYG6 137 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 ABCD4O14678 606 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 MPC2O95563 127 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 TXNDC12O95881 172 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 DPP4P27487 766 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 THBS2P35442 1172 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 ARF1P84077 181 aaKnown RBP11.97□□□□□ -0.49
TCOF1-213ENST00000514442 RUNX2Q13950 521 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 LINC00346Q8IVM7 164 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 SLC30A7Q8NEW0 376 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 SHARPINQ9H0F6 387 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 UBQLN3Q9H347 655 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 RHOFQ9HBH0 211 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 KLK11Q9UBX7 282 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 STEAP1Q9UHE8 339 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 HHLA2Q9UM44 414 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 TRAV36DV7A0A075B6V5 113 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 TEAD1P28347 426 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 CASP6P55212 293 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 RAB1AP62820 205 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 C17orf67Q0P5P2 114 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 Q499Y3 187 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 ACTBL2Q562R1 376 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 FAM57BQ71RH2 274 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 OR11H4Q8NGC9 324 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 ZFPM2Q8WW38 1151 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 HINT3Q9NQE9 182 aaKnown RBP11.97□□□□□ -0.49
TCOF1-213ENST00000514442 LRFN1Q9P244 771 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 PADI1Q9ULC6 663 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 BOKQ9UMX3 212 aaPredicted RBP11.97□□□□□ -0.49
TCOF1-213ENST00000514442 SLC22A7Q9Y694 548 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 TRAV1-2A0A0B4J238 106 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 MPTX1A8MV57 137 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 ZNF587BE7ETH6 402 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 APLNRP35414 380 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 P2RX1P51575 399 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 BIDP55957 195 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 OR52W1Q6IF63 320 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 SLC22A25Q6T423 547 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 CSNK2A3Q8NEV1 391 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 SLC41A2Q96JW4 573 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 CMTM3Q96MX0 182 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 STACQ99469 402 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 TAF9BQ9HBM6 251 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 MED9Q9NWA0 146 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 NTMQ9P121 344 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 CSAG2Q9Y5P2 127 aa11.97□□□□□ -0.49
TCOF1-213ENST00000514442 ZC3H12DA2A288 527 aaKnown RBP11.96□□□□□ -0.49
TCOF1-213ENST00000514442 SURF4O15260 269 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 IFNA1P01562 189 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 HPXP02790 462 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 COL9A1P20849 921 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 SLC26A5P58743 744 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 FAM27D1Q5T7N8 215 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 NIPAL3Q6P499 406 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 BBS1Q8NFJ9 593 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 OR1S2Q8NGQ3 325 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 OCSTAMPQ9BR26 566 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 RNF32Q9H0A6 362 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 NELFAQ9H3P2 528 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 PLXNB2O15031 1838 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 K7EPK0 472 aa11.96□□□□□ -0.49
TCOF1-213ENST00000514442 OR4E1P0C645 316 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms