RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 ATP6V1E1P36543 226 aa9.22□□□□□ -0.93
PDLIM5-217ENST00000512274 ACVR1BP36896 505 aa9.22□□□□□ -0.93
PDLIM5-217ENST00000512274 SUCLG1P53597 346 aaKnown RBP9.22□□□□□ -0.93
PDLIM5-217ENST00000512274 FOXF2Q12947 444 aa9.22□□□□□ -0.93
PDLIM5-217ENST00000512274 LSAMPQ13449 338 aa9.22□□□□□ -0.93
PDLIM5-217ENST00000512274 MED22Q15528 200 aa9.22□□□□□ -0.93
PDLIM5-217ENST00000512274 SSX1Q16384 188 aa9.22□□□□□ -0.93
PDLIM5-217ENST00000512274 TMEM176BQ3YBM2 270 aaPredicted RBP9.22□□□□□ -0.93
PDLIM5-217ENST00000512274 KLHL12Q53G59 568 aa9.22□□□□□ -0.93
PDLIM5-217ENST00000512274 PDSS1Q5T2R2 415 aa9.22□□□□□ -0.93
PDLIM5-217ENST00000512274 ZNF684Q5T5D7 378 aa9.22□□□□□ -0.93
PDLIM5-217ENST00000512274 SLC35D2Q76EJ3 337 aa9.22□□□□□ -0.93
PDLIM5-217ENST00000512274 RHOUQ7L0Q8 258 aa9.22□□□□□ -0.93
PDLIM5-217ENST00000512274 GGNQ86UU5 652 aa9.22□□□□□ -0.93
PDLIM5-217ENST00000512274 ZHX1-C8orf76Q96EF9 292 aa9.22□□□□□ -0.93
PDLIM5-217ENST00000512274 SLC25A44Q96H78 314 aaPredicted RBP9.22□□□□□ -0.93
PDLIM5-217ENST00000512274 WFIKKN1Q96NZ8 548 aa9.22□□□□□ -0.93
PDLIM5-217ENST00000512274 OR5B2Q96R09 309 aa9.22□□□□□ -0.93
PDLIM5-217ENST00000512274 NAA11Q9BSU3 229 aaPredicted RBP9.22□□□□□ -0.93
PDLIM5-217ENST00000512274 BEX2Q9BXY8 128 aa9.22□□□□□ -0.93
PDLIM5-217ENST00000512274 OR51V1Q9H2C8 321 aa9.22□□□□□ -0.93
PDLIM5-217ENST00000512274 MED20Q9H944 212 aa9.22□□□□□ -0.93
PDLIM5-217ENST00000512274 RNF122Q9H9V4 155 aa9.22□□□□□ -0.93
PDLIM5-217ENST00000512274 BABAM2Q9NXR7 383 aa9.22□□□□□ -0.93
PDLIM5-217ENST00000512274 TAS2R16Q9NYV7 291 aa9.22□□□□□ -0.93
PDLIM5-217ENST00000512274 KLHL9Q9P2J3 617 aa9.22□□□□□ -0.93
PDLIM5-217ENST00000512274 KCNG2Q9UJ96 466 aa9.22□□□□□ -0.93
PDLIM5-217ENST00000512274 B9D1Q9UPM9 204 aa9.22□□□□□ -0.93
PDLIM5-217ENST00000512274 RCE1Q9Y256 329 aa9.22□□□□□ -0.93
PDLIM5-217ENST00000512274 DYSFO75923 2080 aa9.22□□□□□ -0.93
PDLIM5-217ENST00000512274 A0A0J9YW62 118 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 DAPL1A0PJW8 107 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 CCDC160A6NGH7 325 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 SHISA8B8ZZ34 492 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 ACTL6AO96019 429 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 TFP02787 698 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 MT-ND5P03915 603 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 TMIGD3P0DMS9 266 aaPredicted RBP9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 AHCYP23526 432 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 SHC1P29353 583 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 GABRA5P31644 462 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 TGM4P49221 684 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 RPS7P62081 194 aaKnown RBP9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 ZNF85Q03923 595 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 GLO1Q04760 184 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 EGR3Q06889 387 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 TRAM1Q15629 374 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 STK11Q15831 433 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 THEM4Q5T1C6 240 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 NSUN5P2Q63ZY6 315 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 ABLIM2Q6H8Q1 611 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 UEVLDQ8IX04 471 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 OR6V1Q8N148 313 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 TMEM99Q8N816 258 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 ZNF454Q8N9F8 522 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 C9orf106Q8NAJ2 232 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 ZPLD1Q8TCW7 415 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 ASB17Q8WXJ9 295 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 UFD1Q92890 307 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 CPNE4Q96A23 557 aaPredicted RBP9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 INTS12Q96CB8 462 aaKnown RBP9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 ZC3HAV1LQ96H79 300 aaKnown RBP9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 SFXN2Q96NB2 322 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 ALG8Q9BVK2 526 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 NAA50Q9GZZ1 169 aaKnown RBP9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 SYT4Q9H2B2 425 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 TRIM36Q9NQ86 728 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 TIGARQ9NQ88 270 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 RPRD1BQ9NQG5 326 aaKnown RBP9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 STUB1Q9UNE7 303 aa9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 SF3B6Q9Y3B4 125 aaKnown RBP9.21□□□□□ -0.94
PDLIM5-217ENST00000512274 MED12Q93074 2177 aa9.2□□□□□ -0.94
PDLIM5-217ENST00000512274 USF3Q68DE3 2245 aa9.2□□□□□ -0.94
PDLIM5-217ENST00000512274 IGKV3D-15A0A087WSY6 115 aa9.2□□□□□ -0.94
PDLIM5-217ENST00000512274 A0A1W2PQL4 384 aaPredicted RBP9.2□□□□□ -0.94
PDLIM5-217ENST00000512274 C11orf98E9PRG8 122 aa9.2□□□□□ -0.94
PDLIM5-217ENST00000512274 DCTN6O00399 190 aa9.2□□□□□ -0.94
PDLIM5-217ENST00000512274 OGG1O15527 345 aa9.2□□□□□ -0.94
PDLIM5-217ENST00000512274 PLPP2O43688 288 aa9.2□□□□□ -0.94
PDLIM5-217ENST00000512274 AIREO43918 545 aa9.2□□□□□ -0.94
PDLIM5-217ENST00000512274 GPRIN2O60269 458 aa9.2□□□□□ -0.94
PDLIM5-217ENST00000512274 ZNF432O94892 652 aa9.2□□□□□ -0.94
PDLIM5-217ENST00000512274 AKR7A3O95154 331 aa9.2□□□□□ -0.94
PDLIM5-217ENST00000512274 IGHG1P01857 330 aa9.2□□□□□ -0.94
PDLIM5-217ENST00000512274 PGA4P0DJD7 388 aa9.2□□□□□ -0.94
PDLIM5-217ENST00000512274 PGA3P0DJD8 388 aa9.2□□□□□ -0.94
PDLIM5-217ENST00000512274 CLUP10909 449 aa9.2□□□□□ -0.94
PDLIM5-217ENST00000512274 IFNGR1P15260 489 aa9.2□□□□□ -0.94
PDLIM5-217ENST00000512274 ZNF708P17019 499 aa9.2□□□□□ -0.94
PDLIM5-217ENST00000512274 ZNF43P17038 809 aa9.2□□□□□ -0.94
PDLIM5-217ENST00000512274 GDF1P27539 372 aa9.2□□□□□ -0.94
PDLIM5-217ENST00000512274 CRYBB2P43320 205 aa9.2□□□□□ -0.94
PDLIM5-217ENST00000512274 OR2B6P58173 313 aa9.2□□□□□ -0.94
PDLIM5-217ENST00000512274 POU3F1Q03052 451 aaPredicted RBP9.2□□□□□ -0.94
PDLIM5-217ENST00000512274 ROM1Q03395 351 aa9.2□□□□□ -0.94
PDLIM5-217ENST00000512274 FAM27E3Q08E93 113 aa9.2□□□□□ -0.94
PDLIM5-217ENST00000512274 AQP6Q13520 282 aa9.2□□□□□ -0.94
PDLIM5-217ENST00000512274 DOC2BQ14184 412 aa9.2□□□□□ -0.94
PDLIM5-217ENST00000512274 SLC17A1Q14916 467 aa9.2□□□□□ -0.94
PDLIM5-217ENST00000512274 KCNMB1Q16558 191 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms