RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 OPN1LWP04000 364 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 YES1P07947 543 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 MRPL3P09001 348 aaKnown RBP8.04□□□□□ -1.12
NR1I3-228ENST00000511676 QDPRP09417 244 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 GABRA1P14867 456 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 MSR1P21757 451 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 GADD45AP24522 165 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 SERPINB10P48595 397 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 STARP49675 285 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 SIRPAP78324 504 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 CAMK2DQ13557 499 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 CDK5R1Q15078 307 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 C1QTNF12Q5T7M4 302 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 HIST2H2BCQ6DN03 193 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 OR2A2Q6IF42 318 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 LRFN4Q6PJG9 635 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 B3GLCTQ6Y288 498 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 ZNF627Q7L945 461 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 AAED1Q7RTV5 226 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 DPY19L4Q7Z388 723 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 DPPA2Q7Z7J5 298 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 SYT14Q8NB59 555 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 OR51L1Q8NGJ5 315 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 RNF133Q8WVZ7 376 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 GATAD2BQ8WXI9 593 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 DNAJA3Q96EY1 480 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 CCDC120Q96HB5 630 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 GMPPAQ96IJ6 420 aaPredicted RBP8.04□□□□□ -1.12
NR1I3-228ENST00000511676 ZFP3Q96NJ6 502 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 ZNF385AQ96PM9 386 aaKnown RBP8.04□□□□□ -1.12
NR1I3-228ENST00000511676 OR8B4Q96RC9 309 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 MED18Q9BUE0 208 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 EMC6Q9BV81 110 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 MROQ9BYG7 248 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 ULBP2Q9BZM5 246 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 NELFAQ9H3P2 528 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 MOB1AQ9H8S9 216 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 CALHM2Q9HA72 323 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 POLE4Q9NR33 117 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 CCDC59Q9P031 241 aaKnown RBP8.04□□□□□ -1.12
NR1I3-228ENST00000511676 SPRR3Q9UBC9 169 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 CLCF1Q9UBD9 225 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 CYB5R1Q9UHQ9 305 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 ST6GALNAC2Q9UJ37 374 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 ING1Q9UK53 422 aaPredicted RBP8.04□□□□□ -1.12
NR1I3-228ENST00000511676 COPS3Q9UNS2 423 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 COA3Q9Y2R0 106 aaPredicted RBP8.04□□□□□ -1.12
NR1I3-228ENST00000511676 NOSIPQ9Y314 301 aaKnown RBP8.04□□□□□ -1.12
NR1I3-228ENST00000511676 SF3B6Q9Y3B4 125 aaKnown RBP8.04□□□□□ -1.12
NR1I3-228ENST00000511676 LIPGQ9Y5X9 500 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 CENPEQ02224 2701 aa8.04□□□□□ -1.12
NR1I3-228ENST00000511676 ITPR2Q14571 2701 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 FAM221AA4D161 298 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 CD8B2A6NJW9 211 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 ACOD1A6NK06 481 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 SLC22A20A6NK97 555 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 TMEM212A6NML5 194 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 H0YC42 278 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 J3QLW9 94 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 SS18L1O75177 396 aaPredicted RBP8.03□□□□□ -1.12
NR1I3-228ENST00000511676 MRPL33O75394 65 aaKnown RBP8.03□□□□□ -1.12
NR1I3-228ENST00000511676 SC5DO75845 299 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 IL1AP01583 271 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 CRHP06850 196 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 ZNF19P17023 458 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 CELP19835 753 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 CRYBB2P43320 205 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 TDGF1P3P51864 188 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 OR12D2P58182 307 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 HIST1H3AP68431 136 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 FMODQ06828 376 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 AQP6Q13520 282 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 HIST2H3PS2Q5TEC6 136 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 FAM27BQ5VT28 67 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 LIPKQ5VXJ0 399 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 HIST2H3AQ71DI3 136 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 SSX6Q7RTT6 188 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 FGD2Q7Z6J4 655 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 KLBQ86Z14 1044 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 GPR137CQ8N3F9 429 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 ST7LQ8TDW4 575 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 ITFG2Q969R8 447 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 BOD1Q96IK1 185 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 TBX5Q99593 518 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 CDADC1Q9BWV3 514 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 PRRG4Q9BZD6 226 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 NAA50Q9GZZ1 169 aaKnown RBP8.03□□□□□ -1.12
NR1I3-228ENST00000511676 DEFB127Q9H1M4 99 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 SLCO5A1Q9H2Y9 848 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 C1orf198Q9H425 327 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 ISG20L2Q9H9L3 353 aaKnown RBP8.03□□□□□ -1.12
NR1I3-228ENST00000511676 KCNJ16Q9NPI9 418 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 MALT1Q9UDY8 824 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 MRM2Q9UI43 246 aaKnown RBP8.03□□□□□ -1.12
NR1I3-228ENST00000511676 GNG8Q9UK08 70 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 MEMO1Q9Y316 297 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 UGT2A1Q9Y4X1 527 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 ZGRF1Q86YA3 2104 aa8.03□□□□□ -1.12
NR1I3-228ENST00000511676 IGHV3-15A0A0B4J1V0 119 aa8.02□□□□□ -1.13
NR1I3-228ENST00000511676 IGKV1D-43A0A0B4J1Z2 117 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms