RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 COX5BP10606 129 aa15.26■□□□□ 0.03
TPM3-220ENST00000509601 ITGA2P17301 1181 aa15.26■□□□□ 0.03
TPM3-220ENST00000509601 SRD5A1P18405 259 aa15.26■□□□□ 0.03
TPM3-220ENST00000509601 GCH1P30793 250 aa15.26■□□□□ 0.03
TPM3-220ENST00000509601 KRT72Q14CN4 511 aa15.26■□□□□ 0.03
TPM3-220ENST00000509601 TSTQ16762 297 aaKnown RBP15.26■□□□□ 0.03
TPM3-220ENST00000509601 SAMD4BQ5PRF9 694 aaKnown RBP15.26■□□□□ 0.03
TPM3-220ENST00000509601 LRRC37BQ96QE4 947 aa15.26■□□□□ 0.03
TPM3-220ENST00000509601 NUAK2Q9H093 628 aa15.26■□□□□ 0.03
TPM3-220ENST00000509601 NARFLQ9H6Q4 476 aa15.26■□□□□ 0.03
TPM3-220ENST00000509601 TREM2Q9NZC2 230 aa15.26■□□□□ 0.03
TPM3-220ENST00000509601 TMEFF2Q9UIK5 374 aaPredicted RBP15.26■□□□□ 0.03
TPM3-220ENST00000509601 MAGEL2Q9UJ55 1249 aa15.26■□□□□ 0.03
TPM3-220ENST00000509601 B4DSR2 109 aa15.25■□□□□ 0.03
TPM3-220ENST00000509601 SOCS2O14508 198 aa15.25■□□□□ 0.03
TPM3-220ENST00000509601 ARPC2O15144 300 aa15.25■□□□□ 0.03
TPM3-220ENST00000509601 GADD45GO95257 159 aa15.25■□□□□ 0.03
TPM3-220ENST00000509601 ZNF81P51508 661 aa15.25■□□□□ 0.03
TPM3-220ENST00000509601 DVL1P1P54792 670 aaPredicted RBP15.25■□□□□ 0.03
TPM3-220ENST00000509601 SMIM11AP58511 58 aa15.25■□□□□ 0.03
TPM3-220ENST00000509601 RFX4Q33E94 735 aa15.25■□□□□ 0.03
TPM3-220ENST00000509601 SMARCD3Q6STE5 483 aa15.25■□□□□ 0.03
TPM3-220ENST00000509601 UNQ6126/PRO20091Q6UXV3 157 aa15.25■□□□□ 0.03
TPM3-220ENST00000509601 VASH1Q7L8A9 365 aaPredicted RBP15.25■□□□□ 0.03
TPM3-220ENST00000509601 PHC2Q8IXK0 858 aa15.25■□□□□ 0.03
TPM3-220ENST00000509601 NSMCE2Q96MF7 247 aa15.25■□□□□ 0.03
TPM3-220ENST00000509601 NDEL1Q9GZM8 345 aa15.25■□□□□ 0.03
TPM3-220ENST00000509601 POFUT1Q9H488 388 aa15.25■□□□□ 0.03
TPM3-220ENST00000509601 ELOVL3Q9HB03 270 aa15.25■□□□□ 0.03
TPM3-220ENST00000509601 NDRG4Q9ULP0 352 aaKnown RBP15.25■□□□□ 0.03
TPM3-220ENST00000509601 CACNG2Q9Y698 323 aa15.25■□□□□ 0.03
TPM3-220ENST00000509601 IGHV1-69-2A0A0G2JMI3 117 aa15.24■□□□□ 0.03
TPM3-220ENST00000509601 ZSCAN5BA6NJL1 495 aa15.24■□□□□ 0.03
TPM3-220ENST00000509601 DCTN6O00399 190 aa15.24■□□□□ 0.03
TPM3-220ENST00000509601 SGCEO43556 437 aa15.24■□□□□ 0.03
TPM3-220ENST00000509601 SPRY3O43610 288 aa15.24■□□□□ 0.03
TPM3-220ENST00000509601 GPANK1O95872 356 aa15.24■□□□□ 0.03
TPM3-220ENST00000509601 ADH4P08319 380 aa15.24■□□□□ 0.03
TPM3-220ENST00000509601 GAAP10253 952 aa15.24■□□□□ 0.03
TPM3-220ENST00000509601 RPS6KA3P51812 740 aa15.24■□□□□ 0.03
TPM3-220ENST00000509601 LSM6P62312 80 aaKnown RBP15.24■□□□□ 0.03
TPM3-220ENST00000509601 SCRN3Q0VDG4 424 aa15.24■□□□□ 0.03
TPM3-220ENST00000509601 PSG7Q13046 419 aa15.24■□□□□ 0.03
TPM3-220ENST00000509601 KCNMB1Q16558 191 aa15.24■□□□□ 0.03
TPM3-220ENST00000509601 CCDC92Q53HC0 331 aaPredicted RBP15.24■□□□□ 0.03
TPM3-220ENST00000509601 SPRNQ5BIV9 151 aa15.24■□□□□ 0.03
TPM3-220ENST00000509601 USP51Q70EK9 711 aa15.24■□□□□ 0.03
TPM3-220ENST00000509601 GLB1L2Q8IW92 636 aa15.24■□□□□ 0.03
TPM3-220ENST00000509601 DEFB107AQ8IZN7 70 aa15.24■□□□□ 0.03
TPM3-220ENST00000509601 TMEM158Q8WZ71 300 aa15.24■□□□□ 0.03
TPM3-220ENST00000509601 SLC7A6Q92536 515 aa15.24■□□□□ 0.03
TPM3-220ENST00000509601 TSSK2Q96PF2 358 aa15.24■□□□□ 0.03
TPM3-220ENST00000509601 RERGLQ9H628 205 aa15.24■□□□□ 0.03
TPM3-220ENST00000509601 IL1RAPQ9NPH3 570 aa15.24■□□□□ 0.03
TPM3-220ENST00000509601 DECR2Q9NUI1 292 aa15.24■□□□□ 0.03
TPM3-220ENST00000509601 TBCCD1Q9NVR7 557 aa15.24■□□□□ 0.03
TPM3-220ENST00000509601 STARD10Q9Y365 291 aa15.24■□□□□ 0.03
TPM3-220ENST00000509601 H3BSA7 217 aa15.23■□□□□ 0.03
TPM3-220ENST00000509601 ARPC3O15145 178 aa15.23■□□□□ 0.03
TPM3-220ENST00000509601 PPP1R3DO95685 299 aa15.23■□□□□ 0.03
TPM3-220ENST00000509601 TFP02787 698 aa15.23■□□□□ 0.03
TPM3-220ENST00000509601 MT-ND5P03915 603 aa15.23■□□□□ 0.03
TPM3-220ENST00000509601 LIPAP38571 399 aa15.23■□□□□ 0.03
TPM3-220ENST00000509601 ARHGDIAP52565 204 aa15.23■□□□□ 0.03
TPM3-220ENST00000509601 SPIBQ01892 262 aa15.23■□□□□ 0.03
TPM3-220ENST00000509601 TEKQ02763 1124 aa15.23■□□□□ 0.03
TPM3-220ENST00000509601 DBPQ10586 325 aaPredicted RBP15.23■□□□□ 0.03
TPM3-220ENST00000509601 FAM209AQ5JX71 171 aa15.23■□□□□ 0.03
TPM3-220ENST00000509601 AVPI1Q5T686 147 aa15.23■□□□□ 0.03
TPM3-220ENST00000509601 C1orf94Q6P1W5 598 aa15.23■□□□□ 0.03
TPM3-220ENST00000509601 C16orf89Q6UX73 402 aa15.23■□□□□ 0.03
TPM3-220ENST00000509601 ADCK1Q86TW2 530 aa15.23■□□□□ 0.03
TPM3-220ENST00000509601 ERMAPQ96PL5 475 aaPredicted RBP15.23■□□□□ 0.03
TPM3-220ENST00000509601 OR52D1Q9H346 318 aa15.23■□□□□ 0.03
TPM3-220ENST00000509601 KRCC1Q9NPI7 259 aaPredicted RBP15.23■□□□□ 0.03
TPM3-220ENST00000509601 ASH2LQ9UBL3 628 aa15.23■□□□□ 0.03
TPM3-220ENST00000509601 B9D1Q9UPM9 204 aa15.23■□□□□ 0.03
TPM3-220ENST00000509601 IGLV1-36A0A0B4J1U3 117 aa15.22■□□□□ 0.03
TPM3-220ENST00000509601 OR6C6A6NF89 314 aa15.22■□□□□ 0.03
TPM3-220ENST00000509601 DOK2O60496 412 aa15.22■□□□□ 0.03
TPM3-220ENST00000509601 DCTN3O75935 186 aa15.22■□□□□ 0.03
TPM3-220ENST00000509601 FABP3P05413 133 aa15.22■□□□□ 0.03
TPM3-220ENST00000509601 HNF1AP20823 631 aa15.22■□□□□ 0.03
TPM3-220ENST00000509601 FPR3P25089 353 aa15.22■□□□□ 0.03
TPM3-220ENST00000509601 RRM2P31350 389 aa15.22■□□□□ 0.03
TPM3-220ENST00000509601 HTR5AP47898 357 aa15.22■□□□□ 0.03
TPM3-220ENST00000509601 GSSP48637 474 aa15.22■□□□□ 0.03
TPM3-220ENST00000509601 HMGA2P52926 109 aa15.22■□□□□ 0.03
TPM3-220ENST00000509601 HIST1H3AP68431 136 aa15.22■□□□□ 0.03
TPM3-220ENST00000509601 SRSF2Q01130 221 aaKnown RBP15.22■□□□□ 0.03
TPM3-220ENST00000509601 MVKQ03426 396 aa15.22■□□□□ 0.03
TPM3-220ENST00000509601 AQP6Q13520 282 aa15.22■□□□□ 0.03
TPM3-220ENST00000509601 SPATS1Q496A3 300 aa15.22■□□□□ 0.03
TPM3-220ENST00000509601 HIST2H3PS2Q5TEC6 136 aa15.22■□□□□ 0.03
TPM3-220ENST00000509601 ARL9Q6T311 187 aa15.22■□□□□ 0.03
TPM3-220ENST00000509601 HIST2H3AQ71DI3 136 aa15.22■□□□□ 0.03
TPM3-220ENST00000509601 OR6V1Q8N148 313 aa15.22■□□□□ 0.03
TPM3-220ENST00000509601 FITM2Q8N6M3 262 aa15.22■□□□□ 0.03
TPM3-220ENST00000509601 MCUR1Q96AQ8 359 aa15.22■□□□□ 0.03
TPM3-220ENST00000509601 SAP30LQ9HAJ7 183 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms