RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 OR51D1Q8NGF3 324 aa13.23□□□□□ -0.29
PHF3-209ENST00000509330 SLC25A43Q8WUT9 341 aaPredicted RBP13.23□□□□□ -0.29
PHF3-209ENST00000509330 ROBO4Q8WZ75 1007 aa13.23□□□□□ -0.29
PHF3-209ENST00000509330 SLC25A38Q96DW6 304 aa13.23□□□□□ -0.29
PHF3-209ENST00000509330 LIN37Q96GY3 246 aaPredicted RBP13.23□□□□□ -0.29
PHF3-209ENST00000509330 SIGLEC12Q96PQ1 595 aa13.23□□□□□ -0.29
PHF3-209ENST00000509330 SNX18Q96RF0 628 aa13.23□□□□□ -0.29
PHF3-209ENST00000509330 DDA1Q9BW61 102 aa13.23□□□□□ -0.29
PHF3-209ENST00000509330 PARD6AQ9NPB6 346 aa13.23□□□□□ -0.29
PHF3-209ENST00000509330 ABRACLQ9P1F3 81 aa13.23□□□□□ -0.29
PHF3-209ENST00000509330 CGGBP1Q9UFW8 167 aaPredicted RBP13.23□□□□□ -0.29
PHF3-209ENST00000509330 LOC107986453A0A1B0GWG9 222 aa13.23□□□□□ -0.29
PHF3-209ENST00000509330 DCDC2BA2VCK2 349 aa13.23□□□□□ -0.29
PHF3-209ENST00000509330 NPIPA2E9PIF3 369 aa13.23□□□□□ -0.29
PHF3-209ENST00000509330 NPIPA3F8WFD2 350 aa13.23□□□□□ -0.29
PHF3-209ENST00000509330 GPR171O14626 319 aa13.23□□□□□ -0.29
PHF3-209ENST00000509330 CBR3O75828 277 aa13.23□□□□□ -0.29
PHF3-209ENST00000509330 CCNKO75909 580 aa13.23□□□□□ -0.29
PHF3-209ENST00000509330 SERPINA7P05543 415 aa13.23□□□□□ -0.29
PHF3-209ENST00000509330 CD1AP06126 327 aa13.23□□□□□ -0.29
PHF3-209ENST00000509330 DLX5P56178 289 aa13.23□□□□□ -0.29
PHF3-209ENST00000509330 SRYQ05066 204 aa13.23□□□□□ -0.29
PHF3-209ENST00000509330 LUZP2Q86TE4 346 aa13.23□□□□□ -0.29
PHF3-209ENST00000509330 OR10S1Q8NGN2 331 aa13.23□□□□□ -0.29
PHF3-209ENST00000509330 UPRTQ96BW1 309 aa13.23□□□□□ -0.29
PHF3-209ENST00000509330 SFXN2Q96NB2 322 aa13.23□□□□□ -0.29
PHF3-209ENST00000509330 SOX7Q9BT81 388 aa13.23□□□□□ -0.29
PHF3-209ENST00000509330 SPRY4Q9C004 299 aa13.23□□□□□ -0.29
PHF3-209ENST00000509330 OR52A1Q9UKL2 312 aa13.23□□□□□ -0.29
PHF3-209ENST00000509330 NCKAP5O14513 1909 aa13.22□□□□□ -0.29
PHF3-209ENST00000509330 IGHEP01854 428 aa13.22□□□□□ -0.29
PHF3-209ENST00000509330 ICAM2P13598 275 aa13.22□□□□□ -0.29
PHF3-209ENST00000509330 ROM1Q03395 351 aa13.22□□□□□ -0.29
PHF3-209ENST00000509330 NHLRC1Q6VVB1 395 aa13.22□□□□□ -0.29
PHF3-209ENST00000509330 TRILQ7L0X0 811 aa13.22□□□□□ -0.29
PHF3-209ENST00000509330 CATSPERDQ86XM0 798 aa13.22□□□□□ -0.29
PHF3-209ENST00000509330 OR13C3Q8NGS6 347 aa13.22□□□□□ -0.29
PHF3-209ENST00000509330 ZPBPQ9BS86 351 aa13.22□□□□□ -0.29
PHF3-209ENST00000509330 PCDHGA9Q9Y5G4 932 aaKnown RBP13.22□□□□□ -0.29
PHF3-209ENST00000509330 LHFPL6Q9Y693 200 aa13.22□□□□□ -0.29
PHF3-209ENST00000509330 CENPBD1B2RD01 187 aa13.22□□□□□ -0.29
PHF3-209ENST00000509330 ADH6P28332 368 aa13.22□□□□□ -0.29
PHF3-209ENST00000509330 MAP2K6P52564 334 aa13.22□□□□□ -0.29
PHF3-209ENST00000509330 AGFG1P52594 562 aaKnown RBP13.22□□□□□ -0.29
PHF3-209ENST00000509330 EFNB2P52799 333 aa13.22□□□□□ -0.29
PHF3-209ENST00000509330 GPR176Q14439 515 aa13.22□□□□□ -0.29
PHF3-209ENST00000509330 TEX30Q5JUR7 227 aa13.22□□□□□ -0.29
PHF3-209ENST00000509330 AGAP6Q5VW22 663 aa13.22□□□□□ -0.29
PHF3-209ENST00000509330 ASB5Q8WWX0 329 aa13.22□□□□□ -0.29
PHF3-209ENST00000509330 TRIM63Q969Q1 353 aa13.22□□□□□ -0.29
PHF3-209ENST00000509330 PPP1R14BQ96C90 147 aa13.22□□□□□ -0.29
PHF3-209ENST00000509330 ZNF837Q96EG3 531 aaPredicted RBP13.22□□□□□ -0.29
PHF3-209ENST00000509330 SGCZQ96LD1 299 aa13.22□□□□□ -0.29
PHF3-209ENST00000509330 AGAP4Q96P64 663 aa13.22□□□□□ -0.29
PHF3-209ENST00000509330 RBM24Q9BX46 236 aaKnown RBP13.22□□□□□ -0.29
PHF3-209ENST00000509330 NUFIP1Q9UHK0 495 aaKnown RBP13.22□□□□□ -0.29
PHF3-209ENST00000509330 GDF2Q9UK05 429 aaPredicted RBP13.22□□□□□ -0.29
PHF3-209ENST00000509330 R4GMQ9 66 aa13.22□□□□□ -0.29
PHF3-209ENST00000509330 TRAV6A0A075B6T7 132 aa13.21□□□□□ -0.29
PHF3-209ENST00000509330 A0A1W2PQ72 361 aa13.21□□□□□ -0.29
PHF3-209ENST00000509330 LRRC3CA6NJW4 275 aa13.21□□□□□ -0.29
PHF3-209ENST00000509330 FAM166BA8MTA8 275 aa13.21□□□□□ -0.29
PHF3-209ENST00000509330 CXCL13O43927 109 aa13.21□□□□□ -0.29
PHF3-209ENST00000509330 CELA3AP09093 270 aa13.21□□□□□ -0.29
PHF3-209ENST00000509330 CD96P40200 585 aa13.21□□□□□ -0.29
PHF3-209ENST00000509330 THEM4Q5T1C6 240 aa13.21□□□□□ -0.29
PHF3-209ENST00000509330 PYHIN1Q6K0P9 492 aa13.21□□□□□ -0.29
PHF3-209ENST00000509330 SLC7A6Q92536 515 aa13.21□□□□□ -0.29
PHF3-209ENST00000509330 PIGQQ9BRB3 760 aa13.21□□□□□ -0.29
PHF3-209ENST00000509330 RNF121Q9H920 327 aa13.21□□□□□ -0.29
PHF3-209ENST00000509330 RBFOX1Q9NWB1 397 aaKnown RBP13.21□□□□□ -0.29
PHF3-209ENST00000509330 ZNF407Q9C0G0 2248 aa13.21□□□□□ -0.29
PHF3-209ENST00000509330 ITGA5P08648 1049 aa13.21□□□□□ -0.29
PHF3-209ENST00000509330 DDOSTP39656 456 aa13.21□□□□□ -0.29
PHF3-209ENST00000509330 NR4A2P43354 598 aa13.21□□□□□ -0.29
PHF3-209ENST00000509330 SRSF6Q13247 344 aaKnown RBP13.21□□□□□ -0.29
PHF3-209ENST00000509330 TAF13Q15543 124 aa13.21□□□□□ -0.29
PHF3-209ENST00000509330 UBE2NLQ5JXB2 153 aa13.21□□□□□ -0.29
PHF3-209ENST00000509330 G6PC2Q9NQR9 355 aa13.21□□□□□ -0.29
PHF3-209ENST00000509330 CYB5R1Q9UHQ9 305 aa13.21□□□□□ -0.29
PHF3-209ENST00000509330 DNAJC13O75165 2243 aa13.21□□□□□ -0.3
PHF3-209ENST00000509330 MT-ND4P03905 459 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 HSD11B1P28845 292 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 GNALP38405 381 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 SUCLG1P53597 346 aaKnown RBP13.2□□□□□ -0.3
PHF3-209ENST00000509330 BCL2L15Q5TBC7 163 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 FAAP20Q6NZ36 180 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 ZNF454Q8N9F8 522 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 OR2AJ1Q8NGZ0 328 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 ZNF845Q96IR2 970 aaPredicted RBP13.2□□□□□ -0.3
PHF3-209ENST00000509330 KCNJ15Q99712 375 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 C1orf198Q9H425 327 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 BEX1Q9HBH7 125 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 RBMX2Q9Y388 322 aaKnown RBP13.2□□□□□ -0.3
PHF3-209ENST00000509330 PTPRZ1P23471 2315 aaPredicted RBP13.2□□□□□ -0.3
PHF3-209ENST00000509330 A0A087WZY1 265 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 TRBV5-7A0A0A0MS05 114 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 MEIS3P1A6NDR6 274 aa13.2□□□□□ -0.3
PHF3-209ENST00000509330 GALR2O43603 387 aaPredicted RBP13.2□□□□□ -0.3
PHF3-209ENST00000509330 IGHV3-9P01782 118 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms