RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 HPXP02790 462 aa15.96■□□□□ 0.15
UBE3D-207ENST00000509102 TACSTD2P09758 323 aa15.96■□□□□ 0.15
UBE3D-207ENST00000509102 LYNX1P0DP58 116 aa15.96■□□□□ 0.15
UBE3D-207ENST00000509102 LIPAP38571 399 aa15.96■□□□□ 0.15
UBE3D-207ENST00000509102 HTR5AP47898 357 aa15.96■□□□□ 0.15
UBE3D-207ENST00000509102 TMEM33P57088 247 aa15.96■□□□□ 0.15
UBE3D-207ENST00000509102 PPP1CBP62140 327 aa15.96■□□□□ 0.15
UBE3D-207ENST00000509102 LSM6P62312 80 aaKnown RBP15.96■□□□□ 0.15
UBE3D-207ENST00000509102 RFX4Q33E94 735 aa15.96■□□□□ 0.15
UBE3D-207ENST00000509102 ZMAT1Q5H9K5 638 aa15.96■□□□□ 0.15
UBE3D-207ENST00000509102 ELFN2Q5R3F8 820 aa15.96■□□□□ 0.15
UBE3D-207ENST00000509102 SPATA46Q5T0L3 261 aa15.96■□□□□ 0.15
UBE3D-207ENST00000509102 CYP2R1Q6VVX0 501 aa15.96■□□□□ 0.15
UBE3D-207ENST00000509102 ZER1Q7Z7L7 766 aa15.96■□□□□ 0.15
UBE3D-207ENST00000509102 ZNF101Q8IZC7 436 aa15.96■□□□□ 0.15
UBE3D-207ENST00000509102 GNPDA2Q8TDQ7 276 aa15.96■□□□□ 0.15
UBE3D-207ENST00000509102 MSI2Q96DH6 328 aaKnown RBP15.96■□□□□ 0.15
UBE3D-207ENST00000509102 C4orf45Q96LM5 186 aa15.96■□□□□ 0.15
UBE3D-207ENST00000509102 FUZQ9BT04 418 aa15.96■□□□□ 0.15
UBE3D-207ENST00000509102 IFT27Q9BW83 186 aa15.96■□□□□ 0.15
UBE3D-207ENST00000509102 OR52D1Q9H346 318 aa15.96■□□□□ 0.15
UBE3D-207ENST00000509102 NKIRAS2Q9NYR9 191 aa15.96■□□□□ 0.15
UBE3D-207ENST00000509102 PLEK2Q9NYT0 353 aa15.96■□□□□ 0.15
UBE3D-207ENST00000509102 LRP5LA4QPB2 252 aa15.95■□□□□ 0.14
UBE3D-207ENST00000509102 PPP1R3DO95685 299 aa15.95■□□□□ 0.14
UBE3D-207ENST00000509102 FAM157CP0CG43 387 aa15.95■□□□□ 0.14
UBE3D-207ENST00000509102 GSTM3P21266 225 aa15.95■□□□□ 0.14
UBE3D-207ENST00000509102 TUBG1P23258 451 aa15.95■□□□□ 0.14
UBE3D-207ENST00000509102 WNT5AP41221 380 aa15.95■□□□□ 0.14
UBE3D-207ENST00000509102 ZNF81P51508 661 aa15.95■□□□□ 0.14
UBE3D-207ENST00000509102 CCL8P80075 99 aa15.95■□□□□ 0.14
UBE3D-207ENST00000509102 GLO1Q04760 184 aa15.95■□□□□ 0.14
UBE3D-207ENST00000509102 FAM209AQ5JX71 171 aa15.95■□□□□ 0.14
UBE3D-207ENST00000509102 MBNL2Q5VZF2 373 aaKnown RBP15.95■□□□□ 0.14
UBE3D-207ENST00000509102 RPL13AP3Q6NVV1 102 aa15.95■□□□□ 0.14
UBE3D-207ENST00000509102 DHFR2Q86XF0 187 aa15.95■□□□□ 0.14
UBE3D-207ENST00000509102 NPEPL1Q8NDH3 523 aa15.95■□□□□ 0.14
UBE3D-207ENST00000509102 OR52L1Q8NGH7 329 aa15.95■□□□□ 0.14
UBE3D-207ENST00000509102 SLC25A40Q8TBP6 338 aa15.95■□□□□ 0.14
UBE3D-207ENST00000509102 COG8Q96MW5 612 aa15.95■□□□□ 0.14
UBE3D-207ENST00000509102 OR2J1Q9GZK6 312 aa15.95■□□□□ 0.14
UBE3D-207ENST00000509102 NUAK2Q9H093 628 aa15.95■□□□□ 0.14
UBE3D-207ENST00000509102 TUBG2Q9NRH3 451 aa15.95■□□□□ 0.14
UBE3D-207ENST00000509102 COA3Q9Y2R0 106 aaPredicted RBP15.95■□□□□ 0.14
UBE3D-207ENST00000509102 TNFRSF11BO00300 401 aa15.94■□□□□ 0.14
UBE3D-207ENST00000509102 ARPC3O15145 178 aa15.94■□□□□ 0.14
UBE3D-207ENST00000509102 PPIHO43447 177 aaKnown RBP15.94■□□□□ 0.14
UBE3D-207ENST00000509102 IDH3BO43837 385 aa15.94■□□□□ 0.14
UBE3D-207ENST00000509102 ICMTO60725 284 aa15.94■□□□□ 0.14
UBE3D-207ENST00000509102 LILRA1O75019 489 aa15.94■□□□□ 0.14
UBE3D-207ENST00000509102 MAGEB1P43366 347 aa15.94■□□□□ 0.14
UBE3D-207ENST00000509102 FXYD6P3P58550 94 aa15.94■□□□□ 0.14
UBE3D-207ENST00000509102 TSPAN31Q12999 210 aa15.94■□□□□ 0.14
UBE3D-207ENST00000509102 C1orf94Q6P1W5 598 aa15.94■□□□□ 0.14
UBE3D-207ENST00000509102 LEG1Q6P5S2 330 aa15.94■□□□□ 0.14
UBE3D-207ENST00000509102 RFPL4BQ6ZWI9 263 aa15.94■□□□□ 0.14
UBE3D-207ENST00000509102 KLF14Q8TD94 323 aaPredicted RBP15.94■□□□□ 0.14
UBE3D-207ENST00000509102 IPCEF1Q8WWN9 437 aaPredicted RBP15.94■□□□□ 0.14
UBE3D-207ENST00000509102 MARS2Q96GW9 593 aaKnown RBP15.94■□□□□ 0.14
UBE3D-207ENST00000509102 LRGUKQ96M69 825 aa15.94■□□□□ 0.14
UBE3D-207ENST00000509102 GPA33Q99795 319 aa15.94■□□□□ 0.14
UBE3D-207ENST00000509102 EGLN1Q9GZT9 426 aa15.94■□□□□ 0.14
UBE3D-207ENST00000509102 SAP30LQ9HAJ7 183 aa15.94■□□□□ 0.14
UBE3D-207ENST00000509102 ASH2LQ9UBL3 628 aa15.94■□□□□ 0.14
UBE3D-207ENST00000509102 PRPF19Q9UMS4 504 aaKnown RBP15.94■□□□□ 0.14
UBE3D-207ENST00000509102 KIAA1324LA8MWY0 1029 aaPredicted RBP15.93■□□□□ 0.14
UBE3D-207ENST00000509102 NCR1O76036 304 aa15.93■□□□□ 0.14
UBE3D-207ENST00000509102 PCMT1P22061 227 aa15.93■□□□□ 0.14
UBE3D-207ENST00000509102 COL8A2P25067 703 aa15.93■□□□□ 0.14
UBE3D-207ENST00000509102 CDKN2AP42771 156 aaKnown RBP15.93■□□□□ 0.14
UBE3D-207ENST00000509102 FAM98BQ52LJ0 330 aaKnown RBP15.93■□□□□ 0.14
UBE3D-207ENST00000509102 PTCHD4Q6ZW05 846 aa15.93■□□□□ 0.14
UBE3D-207ENST00000509102 LINC01356Q8N9X3 169 aa15.93■□□□□ 0.14
UBE3D-207ENST00000509102 SAMD8Q96LT4 415 aa15.93■□□□□ 0.14
UBE3D-207ENST00000509102 DIRC2Q96SL1 478 aa15.93■□□□□ 0.14
UBE3D-207ENST00000509102 MAGIXQ9H6Y5 334 aa15.93■□□□□ 0.14
UBE3D-207ENST00000509102 ZNF275Q9NSD4 429 aaPredicted RBP15.93■□□□□ 0.14
UBE3D-207ENST00000509102 TBCCD1Q9NVR7 557 aa15.93■□□□□ 0.14
UBE3D-207ENST00000509102 GRIP1Q9Y3R0 1128 aa15.93■□□□□ 0.14
UBE3D-207ENST00000509102 IGHV1-69-2A0A0G2JMI3 117 aa15.92■□□□□ 0.14
UBE3D-207ENST00000509102 TIMM8AO60220 97 aaPredicted RBP15.92■□□□□ 0.14
UBE3D-207ENST00000509102 SCG5P05408 212 aa15.92■□□□□ 0.14
UBE3D-207ENST00000509102 ATP6V1B2P21281 511 aa15.92■□□□□ 0.14
UBE3D-207ENST00000509102 GSSP48637 474 aa15.92■□□□□ 0.14
UBE3D-207ENST00000509102 CCNIQ14094 377 aa15.92■□□□□ 0.14
UBE3D-207ENST00000509102 TRIM25Q14258 630 aaKnown RBP15.92■□□□□ 0.14
UBE3D-207ENST00000509102 TRIP10Q15642 601 aa15.92■□□□□ 0.14
UBE3D-207ENST00000509102 TSTQ16762 297 aaKnown RBP15.92■□□□□ 0.14
UBE3D-207ENST00000509102 HFEQ30201 348 aa15.92■□□□□ 0.14
UBE3D-207ENST00000509102 LCN8Q6JVE9 175 aa15.92■□□□□ 0.14
UBE3D-207ENST00000509102 ZNF620Q6ZNG0 422 aa15.92■□□□□ 0.14
UBE3D-207ENST00000509102 VASH1Q7L8A9 365 aaPredicted RBP15.92■□□□□ 0.14
UBE3D-207ENST00000509102 GJC3Q8NFK1 279 aa15.92■□□□□ 0.14
UBE3D-207ENST00000509102 ELMOD3Q96FG2 381 aa15.92■□□□□ 0.14
UBE3D-207ENST00000509102 TIMD4Q96H15 378 aa15.92■□□□□ 0.14
UBE3D-207ENST00000509102 NMNAT3Q96T66 252 aa15.92■□□□□ 0.14
UBE3D-207ENST00000509102 TRIM15Q9C019 465 aa15.92■□□□□ 0.14
UBE3D-207ENST00000509102 ATPIF1Q9UII2 106 aa15.92■□□□□ 0.14
UBE3D-207ENST00000509102 ZDHHC8Q9ULC8 765 aa15.92■□□□□ 0.14
UBE3D-207ENST00000509102 YLPM1P49750 1951 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms