RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 CD52P31358 61 aa3.52□□□□□ -1.85
NEDD4-209ENST00000508871 CNR2P34972 360 aa3.52□□□□□ -1.85
NEDD4-209ENST00000508871 RPL14P50914 215 aaKnown RBP3.52□□□□□ -1.85
NEDD4-209ENST00000508871 CCR8P51685 355 aa3.52□□□□□ -1.85
NEDD4-209ENST00000508871 EWSR1Q01844 656 aaKnown RBP eCLIP3.52□□□□□ -1.85
NEDD4-209ENST00000508871 ATXN7L3Q14CW9 347 aaPredicted RBP3.52□□□□□ -1.85
NEDD4-209ENST00000508871 SLC5A12Q1EHB4 618 aa3.52□□□□□ -1.85
NEDD4-209ENST00000508871 FFAR4Q5NUL3 377 aa3.52□□□□□ -1.85
NEDD4-209ENST00000508871 C1orf189Q5VU69 101 aa3.52□□□□□ -1.85
NEDD4-209ENST00000508871 TXNDC8Q6A555 127 aa3.52□□□□□ -1.85
NEDD4-209ENST00000508871 GRASPQ7Z6J2 395 aaPredicted RBP3.52□□□□□ -1.85
NEDD4-209ENST00000508871 CRIPAKQ8N1N5 446 aa3.52□□□□□ -1.85
NEDD4-209ENST00000508871 UBA3Q8TBC4 463 aa3.52□□□□□ -1.85
NEDD4-209ENST00000508871 IMP4Q96G21 291 aaKnown RBP3.52□□□□□ -1.85
NEDD4-209ENST00000508871 NSMCE3Q96MG7 304 aa3.52□□□□□ -1.85
NEDD4-209ENST00000508871 ZNF75AQ96N20 296 aa3.52□□□□□ -1.85
NEDD4-209ENST00000508871 TNFRSF13CQ96RJ3 184 aa3.52□□□□□ -1.85
NEDD4-209ENST00000508871 CGREF1Q99674 301 aa3.52□□□□□ -1.85
NEDD4-209ENST00000508871 MAP1LC3AQ9H492 121 aa3.52□□□□□ -1.85
NEDD4-209ENST00000508871 ESRP2Q9H6T0 727 aaKnown RBP3.52□□□□□ -1.85
NEDD4-209ENST00000508871 PARD6AQ9NPB6 346 aa3.52□□□□□ -1.85
NEDD4-209ENST00000508871 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.52□□□□□ -1.85
NEDD4-209ENST00000508871 TBL2Q9Y4P3 447 aaKnown RBP3.52□□□□□ -1.85
NEDD4-209ENST00000508871 FADS3Q9Y5Q0 445 aa3.52□□□□□ -1.85
NEDD4-209ENST00000508871 TRBV11-1A0A0K0K1C0 115 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 FAM181BA6NEQ2 426 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 NKX6-3A6NJ46 265 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 F8VP50 259 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 AIPO00170 330 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 TULP2O00295 520 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 APOA2P02652 100 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 VDAC1P21796 283 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 IDSP22304 550 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 OMGP23515 440 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 GDF1P27539 372 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 GNRHRP30968 328 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 RPL35P42766 123 aaKnown RBP3.51□□□□□ -1.85
NEDD4-209ENST00000508871 PLK1P53350 603 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 ZFP69Q49AA0 526 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 TEX30Q5JUR7 227 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 CLLU1OSQ5K130 101 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 WSCD1Q658N2 575 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 ZFP1Q6P2D0 407 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 BTNL8Q6UX41 500 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 ZNF295-AS1Q8N0V1 137 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 ZNF557Q8N988 423 aaPredicted RBP3.51□□□□□ -1.85
NEDD4-209ENST00000508871 OR11H4Q8NGC9 324 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 TFB1MQ8WVM0 346 aaKnown RBP3.51□□□□□ -1.85
NEDD4-209ENST00000508871 FCAMRQ8WWV6 532 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 KCTD7Q96MP8 289 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 PEBP4Q96S96 227 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 PSMB7Q99436 277 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 NKX3-1Q99801 234 aaPredicted RBP3.51□□□□□ -1.85
NEDD4-209ENST00000508871 SLC6A7Q99884 636 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 RTP3Q9BQQ7 232 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 SNRNP25Q9BV90 132 aaKnown RBP3.51□□□□□ -1.85
NEDD4-209ENST00000508871 SMIM3Q9BZL3 60 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 EGLN1Q9GZT9 426 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 ACP6Q9NPH0 428 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 B3GAT2Q9NPZ5 323 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 BIN3Q9NQY0 253 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 ARMC1Q9NVT9 282 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 KCNG2Q9UJ96 466 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 ALPK3Q96L96 1907 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 NPIPB6E9PJ23 425 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 IFNL4K9M1U5 179 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 ZNF195O14628 629 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 EIF4E2O60573 245 aaKnown RBP3.51□□□□□ -1.85
NEDD4-209ENST00000508871 SULT1C4O75897 302 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 TTC4O95801 387 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 SERPINA5P05154 406 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 PRSS56P0CW18 603 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 ADORA2BP29275 332 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 CHRNB4P30926 498 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 CD96P40200 585 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 BDKRB1P46663 353 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 SLC6A8P48029 635 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 ATP5J2P56134 94 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 TAS2R46P59540 309 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 SNRPNP63162 240 aaKnown RBP3.51□□□□□ -1.85
NEDD4-209ENST00000508871 CDC20Q12834 499 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 ENTPD8Q5MY95 495 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 STEAP4Q687X5 459 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 FAM159AQ6UWV7 190 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 GSG1LQ6UXU4 331 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 CSNK1A1LQ8N752 337 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 NOXO1Q8NFA2 376 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 SPPL2BQ8TCT7 592 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 WFIKKN2Q8TEU8 576 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 HGDQ93099 445 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 ZMYND19Q96E35 227 aaPredicted RBP3.51□□□□□ -1.85
NEDD4-209ENST00000508871 ZNF354BQ96LW1 612 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 PTGES2Q9H7Z7 377 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 MYOZ1Q9NP98 299 aaPredicted RBP3.51□□□□□ -1.85
NEDD4-209ENST00000508871 CIDEBQ9UHD4 219 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 PURGQ9UJV8 347 aaKnown RBP3.51□□□□□ -1.85
NEDD4-209ENST00000508871 ARNTLO00327 626 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 MPPED1O15442 326 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 NADKO95544 446 aaPredicted RBP3.51□□□□□ -1.85
NEDD4-209ENST00000508871 PDYNP01213 254 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms