RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 CDH17Q12864 832 aa1.07□□□□□ -2.24
GYPB-209ENST00000508618 TGFBIQ15582 683 aa1.07□□□□□ -2.24
GYPB-209ENST00000508618 SSX2Q16385 188 aa1.07□□□□□ -2.24
GYPB-209ENST00000508618 SMUG1Q53HV7 270 aa1.07□□□□□ -2.24
GYPB-209ENST00000508618 METTL21CQ5VZV1 264 aa1.07□□□□□ -2.24
GYPB-209ENST00000508618 SPECC1LQ69YQ0 1117 aa1.07□□□□□ -2.24
GYPB-209ENST00000508618 ZFP1Q6P2D0 407 aa1.07□□□□□ -2.24
GYPB-209ENST00000508618 CEMP1Q6PRD7 247 aaPredicted RBP1.07□□□□□ -2.24
GYPB-209ENST00000508618 SLC16A13Q7RTY0 426 aa1.07□□□□□ -2.24
GYPB-209ENST00000508618 CDKL3Q8IVW4 592 aaPredicted RBP1.07□□□□□ -2.24
GYPB-209ENST00000508618 LGI3Q8N145 548 aa1.07□□□□□ -2.24
GYPB-209ENST00000508618 OR4K5Q8NGD3 323 aa1.07□□□□□ -2.24
GYPB-209ENST00000508618 OR1S2Q8NGQ3 325 aa1.07□□□□□ -2.24
GYPB-209ENST00000508618 OR2A1Q8NGT9 310 aa1.07□□□□□ -2.24
GYPB-209ENST00000508618 OR8U1Q8NH10 309 aa1.07□□□□□ -2.24
GYPB-209ENST00000508618 PIFOQ8TCI5 191 aa1.07□□□□□ -2.24
GYPB-209ENST00000508618 NT5C3BQ969T7 300 aa1.07□□□□□ -2.24
GYPB-209ENST00000508618 SLC25A46Q96AG3 418 aa1.07□□□□□ -2.24
GYPB-209ENST00000508618 FLYWCH2Q96CP2 140 aaKnown RBP1.07□□□□□ -2.24
GYPB-209ENST00000508618 TUBGCP3Q96CW5 907 aa1.07□□□□□ -2.24
GYPB-209ENST00000508618 TBL1YQ9BQ87 522 aa1.07□□□□□ -2.24
GYPB-209ENST00000508618 PKIBQ9C010 78 aa1.07□□□□□ -2.24
GYPB-209ENST00000508618 HYPKQ9NX55 129 aa1.07□□□□□ -2.24
GYPB-209ENST00000508618 SLC2A8Q9NY64 477 aa1.07□□□□□ -2.24
GYPB-209ENST00000508618 SCN1AP35498 2009 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 F6UB75 175 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 H0Y8G0 127 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 KLHL41O60662 606 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 SEMA3DO95025 777 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 CDRT1O95170 752 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 CTSLP07711 333 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 OR5H8P0DN80 308 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 ZNF43P17038 809 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 DCKP27707 260 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 MAS1LP35410 378 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 KIR3DL2P43630 455 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 SULT1E1P49888 294 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 P2RX1P51575 399 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 ARFIP1P53367 373 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 CDH6P55285 790 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 ATP5IP56385 69 aaPredicted RBP1.06□□□□□ -2.24
GYPB-209ENST00000508618 CRADDP78560 199 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 SLC39A6Q13433 755 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 PGGHGQ32M88 737 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 VPS26BQ4G0F5 336 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 PHYHD1Q5SRE7 291 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 FAM222AQ5U5X8 452 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 UBE2UQ5VVX9 321 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 GALNT17Q6IS24 598 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 CASC1Q6TDU7 716 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 KDELC1Q6UW63 502 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 UQCC3Q6UW78 93 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 NCCRP1Q6ZVX7 275 aaPredicted RBP1.06□□□□□ -2.24
GYPB-209ENST00000508618 TMEM150AQ86TG1 271 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 NBPF5PQ86XG9 351 aaPredicted RBP1.06□□□□□ -2.24
GYPB-209ENST00000508618 MS4A15Q8N5U1 240 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 MIR7-3HGQ8N6C7 128 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 NECAB1Q8N987 351 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 SPANXA2-OT1Q8N9U9 137 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 ST20-AS1Q8NBB2 130 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 FBXL13Q8NEE6 735 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 B3GNT7Q8NFL0 401 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 RAB3IL1Q8TBN0 382 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 PTX4Q96A99 478 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 DCPSQ96C86 337 aaKnown RBP1.06□□□□□ -2.24
GYPB-209ENST00000508618 PKNOX2Q96KN3 472 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 TIMM17AQ99595 171 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 TIMM29Q9BSF4 260 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 RSG1Q9BU20 258 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 TEKT3Q9BXF9 490 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 ROPN1BQ9BZX4 212 aaPredicted RBP1.06□□□□□ -2.24
GYPB-209ENST00000508618 RACGAP1Q9H0H5 632 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 SAMSN1Q9NSI8 373 aaKnown RBP1.06□□□□□ -2.24
GYPB-209ENST00000508618 UXTQ9UBK9 157 aaPredicted RBP1.06□□□□□ -2.24
GYPB-209ENST00000508618 SLC7A8Q9UHI5 535 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 MMACHCQ9Y4U1 282 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 IKBKGQ9Y6K9 419 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 LTBP4Q8N2S1 1624 aa1.06□□□□□ -2.24
GYPB-209ENST00000508618 MYO16Q9Y6X6 1858 aa1.05□□□□□ -2.24
GYPB-209ENST00000508618 COL22A1Q8NFW1 1626 aaPredicted RBP1.05□□□□□ -2.24
GYPB-209ENST00000508618 GLYATL1P3A0A0U1RQE8 302 aa1.05□□□□□ -2.24
GYPB-209ENST00000508618 ZNF816-ZNF321PA0A0X1KG74 233 aa1.05□□□□□ -2.24
GYPB-209ENST00000508618 BTBD17A6NE02 478 aa1.05□□□□□ -2.24
GYPB-209ENST00000508618 LYRM9A8MSI8 78 aa1.05□□□□□ -2.24
GYPB-209ENST00000508618 DNASE2O00115 360 aaPredicted RBP1.05□□□□□ -2.24
GYPB-209ENST00000508618 FOXE1O00358 373 aaPredicted RBP1.05□□□□□ -2.24
GYPB-209ENST00000508618 CHST10O43529 356 aa1.05□□□□□ -2.24
GYPB-209ENST00000508618 CHMP2AO43633 222 aa1.05□□□□□ -2.24
GYPB-209ENST00000508618 DPM1O60762 260 aa1.05□□□□□ -2.24
GYPB-209ENST00000508618 REM1O75628 298 aa1.05□□□□□ -2.24
GYPB-209ENST00000508618 CLPXO76031 633 aa1.05□□□□□ -2.24
GYPB-209ENST00000508618 CLIC3O95833 236 aa1.05□□□□□ -2.24
GYPB-209ENST00000508618 CRYGBP07316 175 aa1.05□□□□□ -2.24
GYPB-209ENST00000508618 CD3GP09693 182 aa1.05□□□□□ -2.24
GYPB-209ENST00000508618 ZNF735P0CB33 412 aa1.05□□□□□ -2.24
GYPB-209ENST00000508618 ZNF250P15622 560 aa1.05□□□□□ -2.24
GYPB-209ENST00000508618 NCF2P19878 526 aaPredicted RBP1.05□□□□□ -2.24
GYPB-209ENST00000508618 NAA10P41227 235 aaPredicted RBP1.05□□□□□ -2.24
GYPB-209ENST00000508618 HCAR3P49019 387 aa1.05□□□□□ -2.24
GYPB-209ENST00000508618 SYNJ2BPP57105 145 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms