RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 SHROOM3Q8TF72 1996 aa4.83□□□□□ -1.64
COL6A4P1-204ENST00000508169 MTCL1Q9Y4B5 1905 aaKnown RBP4.83□□□□□ -1.64
COL6A4P1-204ENST00000508169 DENND4CQ5VZ89 1909 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 ANAPC1Q9H1A4 1944 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 KIAA1671Q9BY89 1806 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 EPOPA6NHQ4 379 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 PCP4L1A6NKN8 68 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 F5H5T6 163 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 KCNK1O00180 336 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 KDELR3O43731 214 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 IGKV3-15P01624 115 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 OPN1MWP04001 364 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 HSPB1P04792 205 aaKnown RBP4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 RPSAP08865 295 aaKnown RBP4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 SNRPAP09012 282 aaKnown RBP4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 OPN1MW2P0DN77 364 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 OPN1MW3P0DN78 364 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 POU2F1P14859 743 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 PSMB1P20618 241 aaKnown RBP4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 OR1E1P30953 314 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 RPL13AP40429 203 aaKnown RBP4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 CSNK1DP48730 415 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 CCT3P49368 545 aaKnown RBP4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 CEBPDP49716 269 aaPredicted RBP4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 DIO3P55073 304 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 ARPP19P56211 112 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 GNA12Q03113 381 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 RCN1Q15293 331 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 PRR30Q53SZ7 412 aaPredicted RBP4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 SFT2D3Q587I9 215 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 SDHAF4Q5VUM1 108 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 OR4F3Q6IEY1 312 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 RWDD4Q6NW29 188 aaKnown RBP4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 EFL1Q7Z2Z2 1120 aaKnown RBP4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 HSD17B13Q7Z5P4 300 aaPredicted RBP4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 OR2L13Q8N349 312 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 BBS5Q8N3I7 341 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 ZNF557Q8N988 423 aaPredicted RBP4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 BHLHE23Q8NDY6 225 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 OR56B4Q8NH76 319 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 RAB3IL1Q8TBN0 382 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 CHMP6Q96FZ7 201 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 MAGEB18Q96M61 343 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 RPRD1AQ96P16 312 aaPredicted RBP4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 NMUR2Q9GZQ4 415 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 SLITRK2Q9H156 845 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 VCX3BQ9H321 246 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 TRABDQ9H4I3 376 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 VPS37BQ9H9H4 285 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 PDFQ9HBH1 243 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 RBM22Q9NW64 420 aaKnown RBP eCLIP4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 TMEM9Q9P0T7 183 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 VANGL2Q9ULK5 521 aa4.82□□□□□ -1.64
COL6A4P1-204ENST00000508169 TMEM120BA0PK00 339 aa4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 GOLGA8MH3BSY2 632 aa4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 BIRC5O15392 142 aa4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 ZMPSTE24O75844 475 aa4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 HOXB8P17481 243 aaPredicted RBP4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 CD9P21926 228 aa4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 SLC26A3P40879 764 aa4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 MAP3K8P41279 467 aa4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 MAGEA12P43365 314 aa4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 SLCO1A2P46721 670 aa4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 RIPPLY3P57055 190 aa4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 RPL26P61254 145 aaKnown RBP4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 GNGT1P63211 74 aa4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 ACVR1Q04771 509 aa4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 TWF1Q12792 350 aa4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 PDPK2PQ6A1A2 396 aa4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 WDR74Q6RFH5 385 aaPredicted RBP4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 C6orf89Q6UWU4 347 aa4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 SLC7A5P1Q8MH63 180 aa4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 LRRC75A-AS1Q8N1F1 130 aa4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 MFSD9Q8NBP5 474 aa4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 OR9A1PQ8NGU1 263 aa4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 OTUB2Q96DC9 234 aa4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 CERS2Q96G23 380 aa4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 KLHDC3Q9BQ90 382 aa4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 CENPHQ9H3R5 247 aa4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 TREX1Q9NSU2 369 aa4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 NKIRAS1Q9NYS0 192 aa4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 DCDC2Q9UHG0 476 aa4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 TP53TG3Q9ULZ0 132 aa4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 PRPF19Q9UMS4 504 aaKnown RBP4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 RPL26L1Q9UNX3 145 aaKnown RBP4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 NOSIPQ9Y314 301 aaKnown RBP4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 OR51B4Q9Y5P0 310 aa4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 MYO16Q9Y6X6 1858 aa4.81□□□□□ -1.64
COL6A4P1-204ENST00000508169 PTPRSQ13332 1948 aa4.8□□□□□ -1.64
COL6A4P1-204ENST00000508169 A0A1B0GUS0 222 aa4.8□□□□□ -1.64
COL6A4P1-204ENST00000508169 HEATR9A2RTY3 570 aa4.8□□□□□ -1.64
COL6A4P1-204ENST00000508169 ZFP92A6NM28 416 aa4.8□□□□□ -1.64
COL6A4P1-204ENST00000508169 H0YC42 278 aa4.8□□□□□ -1.64
COL6A4P1-204ENST00000508169 K7N7A8 449 aa4.8□□□□□ -1.64
COL6A4P1-204ENST00000508169 DFFAO00273 331 aa4.8□□□□□ -1.64
COL6A4P1-204ENST00000508169 DIRAS1O95057 198 aa4.8□□□□□ -1.64
COL6A4P1-204ENST00000508169 STAMBPO95630 424 aa4.8□□□□□ -1.64
COL6A4P1-204ENST00000508169 FGF1P05230 155 aa4.8□□□□□ -1.64
COL6A4P1-204ENST00000508169 HLA-DQB2P05538 268 aa4.8□□□□□ -1.64
COL6A4P1-204ENST00000508169 COX5AP20674 150 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms