RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 SDF2Q99470 211 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 ARHGDIGQ99819 225 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 DGCR6LQ9BY27 220 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 SLC38A1Q9H2H9 487 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 ANKRD19PQ9H560 264 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 MAN2C1Q9NTJ4 1040 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 ACER3Q9NUN7 267 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 SEC14L3Q9UDX4 400 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 FAM96BQ9Y3D0 163 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 ZNF175Q9Y473 711 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 ENPP4Q9Y6X5 453 aa6.34□□□□□ -1.39
CLCN3-206ENST00000507875 TPRP12270 2363 aaKnown RBP6.34□□□□□ -1.39
CLCN3-206ENST00000507875 MRPS14O60783 128 aaKnown RBP6.34□□□□□ -1.4
CLCN3-206ENST00000507875 WBP4O75554 376 aaKnown RBP6.34□□□□□ -1.4
CLCN3-206ENST00000507875 IFNW1P05000 195 aa6.34□□□□□ -1.4
CLCN3-206ENST00000507875 CT62P0C5K7 136 aa6.34□□□□□ -1.4
CLCN3-206ENST00000507875 B4GALT1P15291 398 aa6.34□□□□□ -1.4
CLCN3-206ENST00000507875 MAOAP21397 527 aa6.34□□□□□ -1.4
CLCN3-206ENST00000507875 GP2P55259 537 aaKnown RBP6.34□□□□□ -1.4
CLCN3-206ENST00000507875 SLC3A1Q07837 685 aa6.34□□□□□ -1.4
CLCN3-206ENST00000507875 NSDHLQ15738 373 aa6.34□□□□□ -1.4
CLCN3-206ENST00000507875 ZNF141Q15928 474 aa6.34□□□□□ -1.4
CLCN3-206ENST00000507875 ETFDHQ16134 617 aa6.34□□□□□ -1.4
CLCN3-206ENST00000507875 EXT1Q16394 746 aa6.34□□□□□ -1.4
CLCN3-206ENST00000507875 SYPL1Q16563 259 aa6.34□□□□□ -1.4
CLCN3-206ENST00000507875 SMN1Q16637 294 aaKnown RBP6.34□□□□□ -1.4
CLCN3-206ENST00000507875 DUSP5Q16690 384 aa6.34□□□□□ -1.4
CLCN3-206ENST00000507875 EXOC3L2Q2M3D2 409 aa6.34□□□□□ -1.4
CLCN3-206ENST00000507875 CCDC58Q4VC31 144 aa6.34□□□□□ -1.4
CLCN3-206ENST00000507875 PDLIM3Q53GG5 364 aaPredicted RBP6.34□□□□□ -1.4
CLCN3-206ENST00000507875 C1orf189Q5VU69 101 aa6.34□□□□□ -1.4
CLCN3-206ENST00000507875 C3orf33Q6P1S2 294 aa6.34□□□□□ -1.4
CLCN3-206ENST00000507875 PODNL1Q6PEZ8 512 aa6.34□□□□□ -1.4
CLCN3-206ENST00000507875 KIRREL2Q6UWL6 708 aa6.34□□□□□ -1.4
CLCN3-206ENST00000507875 DHRS13Q6UX07 377 aa6.34□□□□□ -1.4
CLCN3-206ENST00000507875 USP43Q70EL4 1123 aa6.34□□□□□ -1.4
CLCN3-206ENST00000507875 CPEB2Q7Z5Q1 589 aaKnown RBP6.34□□□□□ -1.4
CLCN3-206ENST00000507875 DPPA2Q7Z7J5 298 aa6.34□□□□□ -1.4
CLCN3-206ENST00000507875 ENTHD1Q8IYW4 607 aa6.34□□□□□ -1.4
CLCN3-206ENST00000507875 B3GNT7Q8NFL0 401 aa6.34□□□□□ -1.4
CLCN3-206ENST00000507875 OR5T1Q8NG75 326 aa6.34□□□□□ -1.4
CLCN3-206ENST00000507875 NANPQ8TBE9 248 aa6.34□□□□□ -1.4
CLCN3-206ENST00000507875 FAR1Q8WVX9 515 aa6.34□□□□□ -1.4
CLCN3-206ENST00000507875 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.34□□□□□ -1.4
CLCN3-206ENST00000507875 RAB8BQ92930 207 aa6.34□□□□□ -1.4
CLCN3-206ENST00000507875 SENP5Q96HI0 755 aaPredicted RBP6.34□□□□□ -1.4
CLCN3-206ENST00000507875 LCORQ96JN0 433 aaPredicted RBP6.34□□□□□ -1.4
CLCN3-206ENST00000507875 FUNDC2Q9BWH2 189 aa6.34□□□□□ -1.4
CLCN3-206ENST00000507875 ULBP3Q9BZM4 244 aa6.34□□□□□ -1.4
CLCN3-206ENST00000507875 CCNB1IP1Q9NPC3 277 aa6.34□□□□□ -1.4
CLCN3-206ENST00000507875 WDR45Q9Y484 360 aa6.34□□□□□ -1.4
CLCN3-206ENST00000507875 IDSB3KWA1 339 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 NPIPA7E9PJI5 369 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 FAM20BO75063 409 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 GADD45GO95257 159 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 MT-ND2P03891 347 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 CLPSP04118 112 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 ADH4P08319 380 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 CTXN2P0C2S0 81 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 NPIPA8P0DM63 369 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 ZNF182P17025 639 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-206ENST00000507875 GGT2P36268 569 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 CEACAM3P40198 252 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 FOLR3P41439 243 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 ID2Q02363 134 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 RBPJQ06330 500 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 FUT5Q11128 374 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 VWC2Q2TAL6 325 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 VWA2Q5GFL6 755 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 SPANXN2Q5MJ10 180 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 PXDC1Q5TGL8 231 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 MEDAGQ5VYS4 303 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 NCR3LG1Q68D85 454 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 TYW3Q6IPR3 259 aaKnown RBP6.33□□□□□ -1.4
CLCN3-206ENST00000507875 FAM198BQ6UWH4 519 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 HSDL2Q6YN16 418 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 FRRS1Q6ZNA5 592 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 BHLHA15Q7RTS1 189 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-206ENST00000507875 UBQLNLQ8IYU4 475 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 METTL27Q8N6F8 245 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-206ENST00000507875 SLC16A11Q8NCK7 471 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 OR2Y1Q8NGV0 311 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 M1APQ8TC57 530 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 LRRC20Q8TCA0 184 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 GPR151Q8TDV0 419 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 APOBEC4Q8WW27 367 aaKnown RBP6.33□□□□□ -1.4
CLCN3-206ENST00000507875 APH1BQ8WW43 257 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 RORBQ92753 470 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 CDS1Q92903 461 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 RAB1CQ92928 201 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 C4orf36Q96KX1 117 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 LPAR4Q99677 370 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 NIPSNAP1Q9BPW8 284 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 RACGAP1Q9H0H5 632 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 CALHM2Q9HA72 323 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 ZNF556Q9HAH1 456 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 ASCL3Q9NQ33 180 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 TBC1D24Q9ULP9 559 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 TRAV25A0A0B4J276 109 aa6.33□□□□□ -1.4
CLCN3-206ENST00000507875 A0A1B0GW15 77 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms