RNA–Protein interactions for RNA: ENST00000507836.1

CAST-219, Transcript of calpastatin, human

TSL 3

Gene CAST, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-219	ENST00000507836	NARS2	Q96I59	477 aa	Known RBP	0.98	□□□□□ -2.25
CAST-219	ENST00000507836	RNF157	Q96PX1	679 aa		0.98	□□□□□ -2.25
CAST-219	ENST00000507836	ZBTB18	Q99592	522 aa		0.98	□□□□□ -2.25
CAST-219	ENST00000507836	SLC29A1	Q99808	456 aa		0.98	□□□□□ -2.25
CAST-219	ENST00000507836	SULT4A1	Q9BR01	284 aa		0.98	□□□□□ -2.25
CAST-219	ENST00000507836	SAV1	Q9H4B6	383 aa	Predicted RBP	0.98	□□□□□ -2.25
CAST-219	ENST00000507836	UBE2Z	Q9H832	354 aa	Predicted RBP	0.98	□□□□□ -2.25
CAST-219	ENST00000507836	FGF20	Q9NP95	211 aa	Predicted RBP	0.98	□□□□□ -2.25
CAST-219	ENST00000507836	HYPK	Q9NX55	129 aa		0.98	□□□□□ -2.25
CAST-219	ENST00000507836	NUP50	Q9UKX7	468 aa		0.98	□□□□□ -2.25
CAST-219	ENST00000507836	TSSC4	Q9Y5U2	329 aa	Predicted RBP	0.98	□□□□□ -2.25
CAST-219	ENST00000507836	CAMTA1	Q9Y6Y1	1673 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	GPR179	Q6PRD1	2367 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	TUBGCP6	Q96RT7	1819 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	IGLV1-50	A0A075B6I6	118 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836		A0A1W2PPE3	182 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	OR6C74	A6NCV1	312 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	LGALS9	O00182	355 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	AIM2	O14862	343 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	RAB29	O14966	203 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	LSM1	O15116	133 aa	Known RBP	0.97	□□□□□ -2.25
CAST-219	ENST00000507836	NVL	O15381	856 aa	Known RBP	0.97	□□□□□ -2.25
CAST-219	ENST00000507836	NUPL2	O15504	423 aa	Known RBP	0.97	□□□□□ -2.25
CAST-219	ENST00000507836	CLPX	O76031	633 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	CCNE2	O96020	404 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	SERPINA5	P05154	406 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	CD3G	P09693	182 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	MCF2	P10911	925 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	CD37	P11049	281 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	DCK	P27707	260 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	TAGLN2	P37802	199 aa	Known RBP	0.97	□□□□□ -2.25
CAST-219	ENST00000507836	HCAR3	P49019	387 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	CSNK1E	P49674	416 aa	Known RBP	0.97	□□□□□ -2.25
CAST-219	ENST00000507836	TMED10	P49755	219 aa	Known RBP	0.97	□□□□□ -2.25
CAST-219	ENST00000507836	PLP1	P60201	277 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	TGM3	Q08188	693 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	ZNF816	Q0VGE8	651 aa	Predicted RBP	0.97	□□□□□ -2.25
CAST-219	ENST00000507836	ZNF266	Q14584	549 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	IRF4	Q15306	451 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	VPS26B	Q4G0F5	336 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	PPM1L	Q5SGD2	360 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	THEM4	Q5T1C6	240 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	PRAMEF5	Q5TYX0	476 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	PRAMEF6	Q5VXH4	476 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	RAET1L	Q5VY80	246 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	RNASEK	Q6P5S7	137 aa	Known RBP	0.97	□□□□□ -2.25
CAST-219	ENST00000507836	KDELC1	Q6UW63	502 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	C12orf54	Q6X4T0	127 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	MBOAT1	Q6ZNC8	495 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	PPP1R42	Q7Z4L9	355 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	EGFL6	Q8IUX8	553 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	TRPV1	Q8NER1	839 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	NOXO1	Q8NFA2	376 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	OR13G1	Q8NGZ3	307 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	PIBF1	Q8WXW3	757 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	FBXO32	Q969P5	355 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	NTAN1	Q96AB6	310 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	TUBGCP3	Q96CW5	907 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	ECHDC3	Q96DC8	303 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	MICU1	Q9BPX6	476 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	OR52D1	Q9H346	318 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	DDX19A	Q9NUU7	478 aa	Known RBP	0.97	□□□□□ -2.25
CAST-219	ENST00000507836	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	0.97	□□□□□ -2.25
CAST-219	ENST00000507836	PISD	Q9UG56	409 aa		0.97	□□□□□ -2.25
CAST-219	ENST00000507836	TRAV19	A0A0A6YYK7	116 aa		0.96	□□□□□ -2.26
CAST-219	ENST00000507836	CLRN2	A0PK11	232 aa		0.96	□□□□□ -2.26
CAST-219	ENST00000507836	PCNX2	A6NKB5	2137 aa		0.96	□□□□□ -2.26
CAST-219	ENST00000507836	LRRIQ3	A6PVS8	624 aa	Predicted RBP	0.96	□□□□□ -2.26
CAST-219	ENST00000507836		A8MUU9	505 aa		0.96	□□□□□ -2.26
CAST-219	ENST00000507836	NDUFC2-KCTD14	E9PQ53	114 aa		0.96	□□□□□ -2.26
CAST-219	ENST00000507836	CPLX1	O14810	134 aa		0.96	□□□□□ -2.26
CAST-219	ENST00000507836	CBR3	O75828	277 aa		0.96	□□□□□ -2.26
CAST-219	ENST00000507836	TSPAN13	O95857	204 aa		0.96	□□□□□ -2.26
CAST-219	ENST00000507836	CST1	P01037	141 aa		0.96	□□□□□ -2.26
CAST-219	ENST00000507836	HLA-DQA1	P01909	254 aa		0.96	□□□□□ -2.26
CAST-219	ENST00000507836	OR8U9	P0C7N5	309 aa		0.96	□□□□□ -2.26
CAST-219	ENST00000507836	CCNB1	P14635	433 aa		0.96	□□□□□ -2.26
CAST-219	ENST00000507836	WARS	P23381	471 aa	Known RBP	0.96	□□□□□ -2.26
CAST-219	ENST00000507836	F2R	P25116	425 aa		0.96	□□□□□ -2.26
CAST-219	ENST00000507836	CXCL12	P48061	93 aa		0.96	□□□□□ -2.26
CAST-219	ENST00000507836	SSR4	P51571	173 aa		0.96	□□□□□ -2.26
CAST-219	ENST00000507836	P2RX1	P51575	399 aa		0.96	□□□□□ -2.26
CAST-219	ENST00000507836	VSX2	P58304	361 aa	Predicted RBP	0.96	□□□□□ -2.26
CAST-219	ENST00000507836	TAS2R31	P59538	309 aa		0.96	□□□□□ -2.26
CAST-219	ENST00000507836	CDK5	Q00535	292 aa		0.96	□□□□□ -2.26
CAST-219	ENST00000507836	CYP24A1	Q07973	514 aa		0.96	□□□□□ -2.26
CAST-219	ENST00000507836	BST2	Q10589	180 aa	Known RBP	0.96	□□□□□ -2.26
CAST-219	ENST00000507836	SLC39A6	Q13433	755 aa		0.96	□□□□□ -2.26
CAST-219	ENST00000507836	RBMY1F	Q15415	496 aa	Known RBP	0.96	□□□□□ -2.26
CAST-219	ENST00000507836	MPV17L2	Q567V2	206 aa		0.96	□□□□□ -2.26
CAST-219	ENST00000507836	GPR107	Q5VW38	600 aa		0.96	□□□□□ -2.26
CAST-219	ENST00000507836	AP1AR	Q63HQ0	302 aa		0.96	□□□□□ -2.26
CAST-219	ENST00000507836	MRPL55	Q7Z7F7	128 aa	Known RBP	0.96	□□□□□ -2.26
CAST-219	ENST00000507836	NKAIN4	Q8IVV8	208 aa		0.96	□□□□□ -2.26
CAST-219	ENST00000507836	TMEM256	Q8N2U0	113 aa		0.96	□□□□□ -2.26
CAST-219	ENST00000507836	PRELID2	Q8N945	189 aa		0.96	□□□□□ -2.26
CAST-219	ENST00000507836	NECAB1	Q8N987	351 aa		0.96	□□□□□ -2.26
CAST-219	ENST00000507836	LINC00304	Q8N9R0	145 aa		0.96	□□□□□ -2.26
CAST-219	ENST00000507836	GPR26	Q8NDV2	337 aa		0.96	□□□□□ -2.26
CAST-219	ENST00000507836	SPATA4	Q8NEY3	305 aa		0.96	□□□□□ -2.26

Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms