RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 ARPINQ7Z6K5 226 aa13.57□□□□□ -0.24
PDLIM7-213ENST00000505074 OFCC1Q8IZS5 231 aa13.57□□□□□ -0.24
PDLIM7-213ENST00000505074 SIGLECL1Q8N7X8 197 aa13.57□□□□□ -0.24
PDLIM7-213ENST00000505074 KLF14Q8TD94 323 aaPredicted RBP13.57□□□□□ -0.24
PDLIM7-213ENST00000505074 GEMIN6Q8WXD5 167 aaKnown RBP13.57□□□□□ -0.24
PDLIM7-213ENST00000505074 MARS2Q96GW9 593 aaKnown RBP13.57□□□□□ -0.24
PDLIM7-213ENST00000505074 DUX5Q96PT3 197 aa13.57□□□□□ -0.24
PDLIM7-213ENST00000505074 NDEL1Q9GZM8 345 aa13.57□□□□□ -0.24
PDLIM7-213ENST00000505074 C7orf69Q9H7B7 122 aa13.57□□□□□ -0.24
PDLIM7-213ENST00000505074 ELOVL3Q9HB03 270 aa13.57□□□□□ -0.24
PDLIM7-213ENST00000505074 CYSLTR2Q9NS75 346 aa13.57□□□□□ -0.24
PDLIM7-213ENST00000505074 GMPR2Q9P2T1 348 aaKnown RBP13.57□□□□□ -0.24
PDLIM7-213ENST00000505074 GRHPRQ9UBQ7 328 aa13.57□□□□□ -0.24
PDLIM7-213ENST00000505074 AP3M1Q9Y2T2 418 aa13.57□□□□□ -0.24
PDLIM7-213ENST00000505074 SNX13Q9Y5W8 968 aa13.57□□□□□ -0.24
PDLIM7-213ENST00000505074 NOTCH1P46531 2555 aa13.56□□□□□ -0.24
PDLIM7-213ENST00000505074 DNAJC9-AS1A6NH13 148 aa13.56□□□□□ -0.24
PDLIM7-213ENST00000505074 ZSCAN5BA6NJL1 495 aa13.56□□□□□ -0.24
PDLIM7-213ENST00000505074 C12orf71A8MTZ7 269 aa13.56□□□□□ -0.24
PDLIM7-213ENST00000505074 CXCR6O00574 342 aa13.56□□□□□ -0.24
PDLIM7-213ENST00000505074 XKRYO14609 159 aa13.56□□□□□ -0.24
PDLIM7-213ENST00000505074 ALX3O95076 343 aa13.56□□□□□ -0.24
PDLIM7-213ENST00000505074 ABHD16AO95870 558 aa13.56□□□□□ -0.24
PDLIM7-213ENST00000505074 LIPEQ05469 1076 aa13.56□□□□□ -0.24
PDLIM7-213ENST00000505074 SLC3A1Q07837 685 aa13.56□□□□□ -0.24
PDLIM7-213ENST00000505074 IFI44LQ53G44 452 aa13.56□□□□□ -0.24
PDLIM7-213ENST00000505074 ZMAT1Q5H9K5 638 aa13.56□□□□□ -0.24
PDLIM7-213ENST00000505074 MBNL2Q5VZF2 373 aaKnown RBP13.56□□□□□ -0.24
PDLIM7-213ENST00000505074 DOK3Q7L591 496 aa13.56□□□□□ -0.24
PDLIM7-213ENST00000505074 TREML1Q86YW5 311 aa13.56□□□□□ -0.24
PDLIM7-213ENST00000505074 C4orf45Q96LM5 186 aa13.56□□□□□ -0.24
PDLIM7-213ENST00000505074 PKP2Q99959 881 aa13.56□□□□□ -0.24
PDLIM7-213ENST00000505074 RERGLQ9H628 205 aa13.56□□□□□ -0.24
PDLIM7-213ENST00000505074 MSL2Q9HCI7 577 aa13.56□□□□□ -0.24
PDLIM7-213ENST00000505074 EMC7Q9NPA0 242 aa13.56□□□□□ -0.24
PDLIM7-213ENST00000505074 CMTM6Q9NX76 183 aa13.56□□□□□ -0.24
PDLIM7-213ENST00000505074 NDRG4Q9ULP0 352 aaKnown RBP13.56□□□□□ -0.24
PDLIM7-213ENST00000505074 TANC2Q9HCD6 1990 aa13.55□□□□□ -0.24
PDLIM7-213ENST00000505074 DOK2O60496 412 aa13.55□□□□□ -0.24
PDLIM7-213ENST00000505074 NGFP01138 241 aa13.55□□□□□ -0.24
PDLIM7-213ENST00000505074 FSHBP01225 129 aa13.55□□□□□ -0.24
PDLIM7-213ENST00000505074 IGHV2-5P01817 119 aa13.55□□□□□ -0.24
PDLIM7-213ENST00000505074 FUT4P22083 530 aa13.55□□□□□ -0.24
PDLIM7-213ENST00000505074 LIPAP38571 399 aa13.55□□□□□ -0.24
PDLIM7-213ENST00000505074 HTR5AP47898 357 aa13.55□□□□□ -0.24
PDLIM7-213ENST00000505074 SLC9A3P48764 834 aa13.55□□□□□ -0.24
PDLIM7-213ENST00000505074 MMP15P51511 669 aa13.55□□□□□ -0.24
PDLIM7-213ENST00000505074 SLC7A2P52569 658 aa13.55□□□□□ -0.24
PDLIM7-213ENST00000505074 GUCY1A3Q02108 690 aa13.55□□□□□ -0.24
PDLIM7-213ENST00000505074 PRKCDQ05655 676 aa13.55□□□□□ -0.24
PDLIM7-213ENST00000505074 CYP4Z1Q86W10 505 aa13.55□□□□□ -0.24
PDLIM7-213ENST00000505074 C1orf174Q8IYL3 243 aa13.55□□□□□ -0.24
PDLIM7-213ENST00000505074 LRRC75AQ8NAA5 344 aa13.55□□□□□ -0.24
PDLIM7-213ENST00000505074 ST7LQ8TDW4 575 aa13.55□□□□□ -0.24
PDLIM7-213ENST00000505074 ACOT11Q8WXI4 607 aaPredicted RBP13.55□□□□□ -0.24
PDLIM7-213ENST00000505074 DVL3Q92997 716 aaPredicted RBP13.55□□□□□ -0.24
PDLIM7-213ENST00000505074 FAM162AQ96A26 154 aa13.55□□□□□ -0.24
PDLIM7-213ENST00000505074 HSH2DQ96JZ2 352 aa13.55□□□□□ -0.24
PDLIM7-213ENST00000505074 ZNF570Q96NI8 536 aa13.55□□□□□ -0.24
PDLIM7-213ENST00000505074 GPA33Q99795 319 aa13.55□□□□□ -0.24
PDLIM7-213ENST00000505074 POLE4Q9NR33 117 aa13.55□□□□□ -0.24
PDLIM7-213ENST00000505074 MAN2C1Q9NTJ4 1040 aa13.55□□□□□ -0.24
PDLIM7-213ENST00000505074 CGGBP1Q9UFW8 167 aaPredicted RBP13.55□□□□□ -0.24
PDLIM7-213ENST00000505074 ADAM18Q9Y3Q7 739 aa13.55□□□□□ -0.24
PDLIM7-213ENST00000505074 SERPINA1P01009 418 aa13.54□□□□□ -0.24
PDLIM7-213ENST00000505074 GSTM3P21266 225 aa13.54□□□□□ -0.24
PDLIM7-213ENST00000505074 TNFSF4P23510 183 aa13.54□□□□□ -0.24
PDLIM7-213ENST00000505074 LCN2P80188 198 aa13.54□□□□□ -0.24
PDLIM7-213ENST00000505074 TNFAIP6P98066 277 aaPredicted RBP13.54□□□□□ -0.24
PDLIM7-213ENST00000505074 SCRN3Q0VDG4 424 aa13.54□□□□□ -0.24
PDLIM7-213ENST00000505074 BAMBIQ13145 260 aa13.54□□□□□ -0.24
PDLIM7-213ENST00000505074 ENDOGQ14249 297 aaKnown RBP13.54□□□□□ -0.24
PDLIM7-213ENST00000505074 ANKDD1AQ495B1 522 aa13.54□□□□□ -0.24
PDLIM7-213ENST00000505074 TMEM255AQ5JRV8 349 aa13.54□□□□□ -0.24
PDLIM7-213ENST00000505074 C1orf94Q6P1W5 598 aa13.54□□□□□ -0.24
PDLIM7-213ENST00000505074 TBPL2Q6SJ96 375 aa13.54□□□□□ -0.24
PDLIM7-213ENST00000505074 MBOAT2Q6ZWT7 520 aa13.54□□□□□ -0.24
PDLIM7-213ENST00000505074 SLC15A3Q8IY34 581 aa13.54□□□□□ -0.24
PDLIM7-213ENST00000505074 RNF113BQ8IZP6 322 aaKnown RBP13.54□□□□□ -0.24
PDLIM7-213ENST00000505074 RP9Q8TA86 221 aaKnown RBP13.54□□□□□ -0.24
PDLIM7-213ENST00000505074 SLC25A28Q96A46 364 aa13.54□□□□□ -0.24
PDLIM7-213ENST00000505074 DCLRE1CQ96SD1 692 aaKnown RBP13.54□□□□□ -0.24
PDLIM7-213ENST00000505074 OPN4Q9UHM6 478 aa13.54□□□□□ -0.24
PDLIM7-213ENST00000505074 ZDHHC8Q9ULC8 765 aa13.54□□□□□ -0.24
PDLIM7-213ENST00000505074 ARHGAP32A7KAX9 2087 aa13.54□□□□□ -0.24
PDLIM7-213ENST00000505074 A0A087WUU8 490 aa13.53□□□□□ -0.24
PDLIM7-213ENST00000505074 H3BSA7 217 aa13.53□□□□□ -0.24
PDLIM7-213ENST00000505074 FFAR1O14842 300 aa13.53□□□□□ -0.24
PDLIM7-213ENST00000505074 SLC22A2O15244 555 aa13.53□□□□□ -0.24
PDLIM7-213ENST00000505074 DEAF1O75398 565 aaPredicted RBP13.53□□□□□ -0.24
PDLIM7-213ENST00000505074 RNASE1P07998 156 aaKnown RBP13.53□□□□□ -0.24
PDLIM7-213ENST00000505074 COX4I1P13073 169 aa13.53□□□□□ -0.24
PDLIM7-213ENST00000505074 ZBED5Q49AG3 693 aa13.53□□□□□ -0.24
PDLIM7-213ENST00000505074 MTX3Q5HYI7 312 aa13.53□□□□□ -0.24
PDLIM7-213ENST00000505074 FGD3Q5JSP0 725 aa13.53□□□□□ -0.24
PDLIM7-213ENST00000505074 FOXL2NBQ6ZUU3 175 aa13.53□□□□□ -0.24
PDLIM7-213ENST00000505074 CBLL1Q75N03 491 aa13.53□□□□□ -0.24
PDLIM7-213ENST00000505074 ZER1Q7Z7L7 766 aa13.53□□□□□ -0.24
PDLIM7-213ENST00000505074 NPEPL1Q8NDH3 523 aa13.53□□□□□ -0.24
PDLIM7-213ENST00000505074 FAM46AQ96IP4 442 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms