RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 RHNO1Q9BSD3 238 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 DUSP15Q9H1R2 295 aaPredicted RBP2.52□□□□□ -2.01
NEDD4-204ENST00000503468 TNFRSF12AQ9NP84 129 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 NRIP3Q9NQ35 241 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 RPS10P5Q9NQ39 176 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 CRLS1Q9UJA2 301 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 NOD1Q9Y239 953 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 V9GY05 133 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 SCN3AQ9NY46 2000 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 TRBV24-1A0A075B6N3 115 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 A0A1B0GW64 132 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 IFITM5A6NNB3 132 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 SURF4O15260 269 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 OGG1O15527 345 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 IFNA21P01568 189 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 RPN2P04844 631 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 KLK3P07288 261 aaPredicted RBP2.51□□□□□ -2.01
NEDD4-204ENST00000503468 QDPRP09417 244 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 BMI1P35226 326 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 SLC6A9P48067 706 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 POU3F4P49335 361 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 SULT1A2P50226 295 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 HBA1P69905 142 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 SGCGQ13326 291 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 ALKBH1Q13686 389 aaKnown RBP2.51□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF141Q15928 474 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 UBE2NLQ5JXB2 153 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 TMEM42Q69YG0 159 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 PGBD2Q6P3X8 592 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 TPRG1Q6ZUI0 275 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 C1orf87Q8N0U7 546 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 NXPE1Q8N323 547 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 OR10H5Q8NGA6 315 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 OR10A7Q8NGE5 316 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 OR9K2Q8NGE7 335 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 MITD1Q8WV92 249 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 LPPQ93052 612 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 RBMXL1Q96E39 390 aaKnown RBP2.51□□□□□ -2.01
NEDD4-204ENST00000503468 PIK3IP1Q96FE7 263 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 SMIM8Q96KF7 97 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF582Q96NG8 517 aaPredicted RBP2.51□□□□□ -2.01
NEDD4-204ENST00000503468 NSUN5Q96P11 429 aaKnown RBP2.51□□□□□ -2.01
NEDD4-204ENST00000503468 PCGF1Q9BSM1 259 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 MS4A7Q9GZW8 240 aaPredicted RBP2.51□□□□□ -2.01
NEDD4-204ENST00000503468 PELI2Q9HAT8 420 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 RRAGCQ9HB90 399 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 IL26Q9NPH9 171 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 SLC2A8Q9NY64 477 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 KIAA1456Q9P272 454 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 DYRK1BQ9Y463 629 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 THADAQ6YHU6 1953 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 PRAMEF27A3QJZ7 478 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF705EA8MWA4 302 aaPredicted RBP2.51□□□□□ -2.01
NEDD4-204ENST00000503468 J3QR89 54 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 M0R036 132 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 B4GALT2O60909 372 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 CLEC3AO75596 197 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 MMP23AO75900 390 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 TOX4O94842 621 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 CPSF4O95639 269 aaKnown RBP2.51□□□□□ -2.01
NEDD4-204ENST00000503468 CD74P04233 296 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 HCKP08631 526 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 F7P08709 466 aaPredicted RBP2.51□□□□□ -2.01
NEDD4-204ENST00000503468 NQO2P16083 231 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 ITPKBP27987 946 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 SSTR4P31391 388 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 THBS2P35442 1172 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 RAD52P43351 418 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 CDKN1CP49918 316 aaPredicted RBP2.51□□□□□ -2.01
NEDD4-204ENST00000503468 AFF3P51826 1226 aaKnown RBP2.51□□□□□ -2.01
NEDD4-204ENST00000503468 CLDN12P56749 244 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 TAS2R50P59544 299 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 RPS25P62851 125 aaKnown RBP2.51□□□□□ -2.01
NEDD4-204ENST00000503468 SHBQ15464 509 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 UBE2V2Q15819 145 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 MOGAT2Q3SYC2 334 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 SLC36A2Q495M3 483 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 EIPR1Q53HC9 387 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 PYY3Q5JQD4 70 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 GPR157Q5UAW9 335 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 KHDRBS2Q5VWX1 349 aaKnown RBP2.51□□□□□ -2.01
NEDD4-204ENST00000503468 ARHGAP11AQ6P4F7 1023 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 DNM1P34Q6PK57 102 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 CLEC9AQ6UXN8 241 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 SLC16A14Q7RTX9 510 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF100Q8IYN0 542 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 GCNT2Q8N0V5 402 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 EDARADDQ8WWZ3 215 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 SMPDL3BQ92485 455 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 ZBTB8AQ96BR9 441 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 SMIM19Q96E16 107 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 CAPNS2Q96L46 248 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 TEAD3Q99594 435 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 ATG5Q9H1Y0 275 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 SLC2A9Q9NRM0 540 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 JKAMPQ9P055 326 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 INSL5Q9Y5Q6 135 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 ALPK2Q86TB3 2170 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 CCDC88CQ9P219 2028 aa2.51□□□□□ -2.01
NEDD4-204ENST00000503468 TRBV6-6A0A0A6YYG2 114 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms