RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 VPS26AO75436 327 aa4.02□□□□□ -1.77
NIPBL-203ENST00000503274 KLF7O75840 302 aaPredicted RBP4.02□□□□□ -1.77
NIPBL-203ENST00000503274 CAPN1P07384 714 aa4.02□□□□□ -1.77
NIPBL-203ENST00000503274 UQCRHP07919 91 aa4.02□□□□□ -1.77
NIPBL-203ENST00000503274 ZP3P21754 424 aa4.02□□□□□ -1.77
NIPBL-203ENST00000503274 CD9P21926 228 aa4.02□□□□□ -1.77
NIPBL-203ENST00000503274 MMP11P24347 488 aa4.02□□□□□ -1.77
NIPBL-203ENST00000503274 PTBP1P26599 531 aaKnown RBP eCLIP4.02□□□□□ -1.77
NIPBL-203ENST00000503274 FOXN2P32314 431 aa4.02□□□□□ -1.77
NIPBL-203ENST00000503274 HSD17B2P37059 387 aa4.02□□□□□ -1.77
NIPBL-203ENST00000503274 CDK16Q00536 496 aa4.02□□□□□ -1.77
NIPBL-203ENST00000503274 CYP51A1Q16850 503 aa4.02□□□□□ -1.77
NIPBL-203ENST00000503274 NADK2Q4G0N4 442 aa4.02□□□□□ -1.77
NIPBL-203ENST00000503274 ZNF658BQ4V348 819 aaPredicted RBP4.02□□□□□ -1.77
NIPBL-203ENST00000503274 SLX4IPQ5VYV7 408 aa4.02□□□□□ -1.77
NIPBL-203ENST00000503274 ZNF57Q68EA5 555 aaPredicted RBP4.02□□□□□ -1.77
NIPBL-203ENST00000503274 ZNF544Q6NX49 715 aa4.02□□□□□ -1.77
NIPBL-203ENST00000503274 PRMT9Q6P2P2 845 aa4.02□□□□□ -1.77
NIPBL-203ENST00000503274 IGFL3Q6UXB1 125 aa4.02□□□□□ -1.77
NIPBL-203ENST00000503274 SLC13A5Q86YT5 568 aaPredicted RBP4.02□□□□□ -1.77
NIPBL-203ENST00000503274 SLC34A3Q8N130 599 aa4.02□□□□□ -1.77
NIPBL-203ENST00000503274 OR2L8Q8NGY9 312 aa4.02□□□□□ -1.77
NIPBL-203ENST00000503274 ADAMTS16Q8TE57 1224 aa4.02□□□□□ -1.77
NIPBL-203ENST00000503274 SLC25A36Q96CQ1 311 aa4.02□□□□□ -1.77
NIPBL-203ENST00000503274 EBNA1BP2Q99848 306 aaKnown RBP4.02□□□□□ -1.77
NIPBL-203ENST00000503274 SELENOSQ9BQE4 189 aa4.02□□□□□ -1.77
NIPBL-203ENST00000503274 NUDT9Q9BW91 350 aa4.02□□□□□ -1.77
NIPBL-203ENST00000503274 TMEM231Q9H6L2 316 aa4.02□□□□□ -1.77
NIPBL-203ENST00000503274 ZNF702PQ9H963 129 aa4.02□□□□□ -1.77
NIPBL-203ENST00000503274 WDR54Q9H977 334 aa4.02□□□□□ -1.77
NIPBL-203ENST00000503274 FAM60AQ9NP50 221 aa4.02□□□□□ -1.77
NIPBL-203ENST00000503274 PLSCR3Q9NRY6 295 aa4.02□□□□□ -1.77
NIPBL-203ENST00000503274 EHFQ9NZC4 300 aa4.02□□□□□ -1.77
NIPBL-203ENST00000503274 DHCR7Q9UBM7 475 aaKnown RBP4.02□□□□□ -1.77
NIPBL-203ENST00000503274 GUCA1BQ9UMX6 200 aa4.02□□□□□ -1.77
NIPBL-203ENST00000503274 MAP1AP78559 2803 aaPredicted RBP4.02□□□□□ -1.77
NIPBL-203ENST00000503274 CACNA1DQ01668 2161 aa4.02□□□□□ -1.77
NIPBL-203ENST00000503274 PCM1Q15154 2024 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 POLQO75417 2590 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 OR51F1A6NGY5 319 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 TCP11X1B4DZS4 312 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 E5RI56 91 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 H0YL77 283 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 SSX5O60225 188 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 OR1I1O60431 355 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 CATP04040 527 aaKnown RBP4.01□□□□□ -1.77
NIPBL-203ENST00000503274 ANXA5P08758 320 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 ICAM2P13598 275 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 MAGP20916 626 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 RPS3P23396 243 aaKnown RBP eCLIP4.01□□□□□ -1.77
NIPBL-203ENST00000503274 CXCR2P25025 360 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 CMPK1P30085 196 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 CCR7P32248 378 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 RPA3P35244 121 aaPredicted RBP4.01□□□□□ -1.77
NIPBL-203ENST00000503274 HTR5AP47898 357 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 EMDP50402 254 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 VSX2P58304 361 aaPredicted RBP4.01□□□□□ -1.77
NIPBL-203ENST00000503274 BASP1P80723 227 aaKnown RBP4.01□□□□□ -1.77
NIPBL-203ENST00000503274 ACVR1Q04771 509 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 GAMTQ14353 236 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 ARHGAP19Q14CB8 494 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 UBE2V2Q15819 145 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 DEFB110Q30KQ9 67 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 TTLL9Q3SXZ7 439 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 UFSP1Q6NVU6 142 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 CEND1Q8N111 149 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 CSNK1A1LQ8N752 337 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 LINC01006Q8NI28 216 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 C1orf54Q8WWF1 131 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 NCLNQ969V3 563 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 RERGQ96A58 199 aaPredicted RBP4.01□□□□□ -1.77
NIPBL-203ENST00000503274 NMNAT2Q9BZQ4 307 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 CHRAC1Q9NRG0 131 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 SPATA7Q9P0W8 599 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 ZNF282Q9UDV7 671 aaPredicted RBP4.01□□□□□ -1.77
NIPBL-203ENST00000503274 PACSIN2Q9UNF0 486 aaPredicted RBP4.01□□□□□ -1.77
NIPBL-203ENST00000503274 PDE10AQ9Y233 779 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 TNRC6AQ8NDV7 1962 aaKnown RBP4.01□□□□□ -1.77
NIPBL-203ENST00000503274 APCP25054 2843 aa4.01□□□□□ -1.77
NIPBL-203ENST00000503274 CCDC88CQ9P219 2028 aa4□□□□□ -1.77
NIPBL-203ENST00000503274 SHANK1Q9Y566 2161 aa4□□□□□ -1.77
NIPBL-203ENST00000503274 ZGRF1Q86YA3 2104 aa4□□□□□ -1.77
NIPBL-203ENST00000503274 NSG1A0A0A6YYJ2 146 aa4□□□□□ -1.77
NIPBL-203ENST00000503274 IQCF5A8MTL0 148 aa4□□□□□ -1.77
NIPBL-203ENST00000503274 H0Y9J4 135 aa4□□□□□ -1.77
NIPBL-203ENST00000503274 PPIHO43447 177 aaKnown RBP4□□□□□ -1.77
NIPBL-203ENST00000503274 VAPBO95292 243 aa4□□□□□ -1.77
NIPBL-203ENST00000503274 C1orf105O95561 183 aa4□□□□□ -1.77
NIPBL-203ENST00000503274 MT-ATP6P00846 226 aa4□□□□□ -1.77
NIPBL-203ENST00000503274 FGGP02679 453 aa4□□□□□ -1.77
NIPBL-203ENST00000503274 HSPB1P04792 205 aaKnown RBP4□□□□□ -1.77
NIPBL-203ENST00000503274 HEXBP07686 556 aa4□□□□□ -1.77
NIPBL-203ENST00000503274 CCDC166P0CW27 439 aa4□□□□□ -1.77
NIPBL-203ENST00000503274 CD1EP15812 388 aa4□□□□□ -1.77
NIPBL-203ENST00000503274 TSPAN8P19075 237 aa4□□□□□ -1.77
NIPBL-203ENST00000503274 OGNP20774 298 aaKnown RBP4□□□□□ -1.77
NIPBL-203ENST00000503274 RPL22P35268 128 aaKnown RBP4□□□□□ -1.77
NIPBL-203ENST00000503274 UQCRFS1P47985 274 aa4□□□□□ -1.77
NIPBL-203ENST00000503274 GABRA4P48169 554 aa4□□□□□ -1.77
NIPBL-203ENST00000503274 EMP2P54851 167 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms