RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 APH1BQ8WW43 257 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 RFKQ969G6 155 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 WNT5BQ9H1J7 359 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 ESRP2Q9H6T0 727 aaKnown RBP10.35□□□□□ -0.75
CUX1-210ENST00000497815 A6NNC1 897 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 ABCD4O14678 606 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 SGCEO43556 437 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 DOK2O60496 412 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 TMCC2O75069 709 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 IGKV3-15P01624 115 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 SERPINA5P05154 406 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 ZNF14P17017 642 aaPredicted RBP10.34□□□□□ -0.75
CUX1-210ENST00000497815 CCNOP22674 350 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 PTAFRP25105 342 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 CD40P25942 277 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 APEX1P27695 318 aaKnown RBP10.34□□□□□ -0.75
CUX1-210ENST00000497815 ATP6V1E1P36543 226 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 HTR5AP47898 357 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 HSPA13P48723 471 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 EIF2B1Q14232 305 aaKnown RBP10.34□□□□□ -0.75
CUX1-210ENST00000497815 OCLNQ16625 522 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 SMN1Q16637 294 aaKnown RBP10.34□□□□□ -0.75
CUX1-210ENST00000497815 CCDC92Q53HC0 331 aaPredicted RBP10.34□□□□□ -0.75
CUX1-210ENST00000497815 BEX5Q5H9J7 111 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 NCMAPQ5T1S8 102 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 C1QTNF12Q5T7M4 302 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 SLC16A9Q7RTY1 509 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 DCXRQ7Z4W1 244 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 SYT9Q86SS6 491 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 TIGD4Q8IY51 512 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 CPEB3Q8NE35 698 aaKnown RBP10.34□□□□□ -0.75
CUX1-210ENST00000497815 GJC3Q8NFK1 279 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 RNFT2Q96EX2 444 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 RADILQ96JH8 1075 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 Q96MT0 163 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 ZNF75AQ96N20 296 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 CNN2Q99439 309 aaKnown RBP10.34□□□□□ -0.75
CUX1-210ENST00000497815 MARCH7Q9H992 704 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 MOV10Q9HCE1 1003 aaKnown RBP10.34□□□□□ -0.75
CUX1-210ENST00000497815 AMBNQ9NP70 447 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 PLEK2Q9NYT0 353 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 CRNNQ9UBG3 495 aaPredicted RBP10.34□□□□□ -0.75
CUX1-210ENST00000497815 WARS2Q9UGM6 360 aaKnown RBP10.34□□□□□ -0.75
CUX1-210ENST00000497815 CYB5R1Q9UHQ9 305 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 KCNG2Q9UJ96 466 aa10.34□□□□□ -0.75
CUX1-210ENST00000497815 GDF2Q9UK05 429 aaPredicted RBP10.34□□□□□ -0.75
CUX1-210ENST00000497815 WBP4O75554 376 aaKnown RBP10.33□□□□□ -0.76
CUX1-210ENST00000497815 IGLV1-44P01699 117 aa10.33□□□□□ -0.76
CUX1-210ENST00000497815 CD3EP07766 207 aa10.33□□□□□ -0.76
CUX1-210ENST00000497815 PAX7P23759 505 aa10.33□□□□□ -0.76
CUX1-210ENST00000497815 STOMP27105 288 aa10.33□□□□□ -0.76
CUX1-210ENST00000497815 APLNRP35414 380 aa10.33□□□□□ -0.76
CUX1-210ENST00000497815 NR1H2P55055 460 aa10.33□□□□□ -0.76
CUX1-210ENST00000497815 ISL1P61371 349 aa10.33□□□□□ -0.76
CUX1-210ENST00000497815 GGTLC2Q14390 218 aa10.33□□□□□ -0.76
CUX1-210ENST00000497815 DAZAP2Q15038 168 aaPredicted RBP10.33□□□□□ -0.76
CUX1-210ENST00000497815 TEX30Q5JUR7 227 aa10.33□□□□□ -0.76
CUX1-210ENST00000497815 SLC25A30Q5SVS4 291 aa10.33□□□□□ -0.76
CUX1-210ENST00000497815 ADAM5Q6NVV9 412 aa10.33□□□□□ -0.76
CUX1-210ENST00000497815 SLC22A25Q6T423 547 aa10.33□□□□□ -0.76
CUX1-210ENST00000497815 USP51Q70EK9 711 aa10.33□□□□□ -0.76
CUX1-210ENST00000497815 VASH1Q7L8A9 365 aaPredicted RBP10.33□□□□□ -0.76
CUX1-210ENST00000497815 ALDH16A1Q8IZ83 802 aa10.33□□□□□ -0.76
CUX1-210ENST00000497815 FAM169BQ8N8A8 192 aa10.33□□□□□ -0.76
CUX1-210ENST00000497815 SLC30A7Q8NEW0 376 aa10.33□□□□□ -0.76
CUX1-210ENST00000497815 THEM6Q8WUY1 208 aa10.33□□□□□ -0.76
CUX1-210ENST00000497815 MAP6Q96JE9 813 aa10.33□□□□□ -0.76
CUX1-210ENST00000497815 AMELYQ99218 206 aa10.33□□□□□ -0.76
CUX1-210ENST00000497815 TBX5Q99593 518 aa10.33□□□□□ -0.76
CUX1-210ENST00000497815 ZNF184Q99676 751 aaPredicted RBP10.33□□□□□ -0.76
CUX1-210ENST00000497815 KCNS3Q9BQ31 491 aa10.33□□□□□ -0.76
CUX1-210ENST00000497815 WACQ9BTA9 647 aa10.33□□□□□ -0.76
CUX1-210ENST00000497815 TTTY10Q9BZA0 68 aa10.33□□□□□ -0.76
CUX1-210ENST00000497815 ADGRL4Q9HBW9 690 aa10.33□□□□□ -0.76
CUX1-210ENST00000497815 CENPMQ9NSP4 180 aa10.33□□□□□ -0.76
CUX1-210ENST00000497815 FBXL3Q9UKT7 428 aa10.33□□□□□ -0.76
CUX1-210ENST00000497815 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.33□□□□□ -0.766e-10■■□□□ 13.5
CUX1-210ENST00000497815 KLHDC2Q9Y2U9 406 aa10.33□□□□□ -0.76
CUX1-210ENST00000497815 UTP20O75691 2785 aaKnown RBP10.33□□□□□ -0.76
CUX1-210ENST00000497815 LRRK2Q5S007 2527 aa10.32□□□□□ -0.76
CUX1-210ENST00000497815 C5orf49A4QMS7 147 aa10.32□□□□□ -0.76
CUX1-210ENST00000497815 SNTNA6NMZ2 147 aa10.32□□□□□ -0.76
CUX1-210ENST00000497815 ATP6V1G2-DDX39BF2Z307 99 aa10.32□□□□□ -0.76
CUX1-210ENST00000497815 PLAUP00749 431 aa10.32□□□□□ -0.76
CUX1-210ENST00000497815 PTHP01270 115 aa10.32□□□□□ -0.76
CUX1-210ENST00000497815 CRYAAP02489 173 aa10.32□□□□□ -0.76
CUX1-210ENST00000497815 SBK2P0C263 348 aa10.32□□□□□ -0.76
CUX1-210ENST00000497815 DBTP11182 482 aaKnown RBP10.32□□□□□ -0.76
CUX1-210ENST00000497815 LOXP28300 417 aaPredicted RBP10.32□□□□□ -0.76
CUX1-210ENST00000497815 CALCRP30988 508 aa10.32□□□□□ -0.76
CUX1-210ENST00000497815 MTNR1AP48039 350 aa10.32□□□□□ -0.76
CUX1-210ENST00000497815 GDI2P50395 445 aaKnown RBP10.32□□□□□ -0.76
CUX1-210ENST00000497815 HIST1H3AP68431 136 aa10.32□□□□□ -0.76
CUX1-210ENST00000497815 NAAAQ02083 359 aa10.32□□□□□ -0.76
CUX1-210ENST00000497815 ZNF91Q05481 1191 aa10.32□□□□□ -0.76
CUX1-210ENST00000497815 RAB35Q15286 201 aa10.32□□□□□ -0.76
CUX1-210ENST00000497815 PCK2Q16822 640 aa10.32□□□□□ -0.76
CUX1-210ENST00000497815 TBC1D28Q2M2D7 210 aa10.32□□□□□ -0.76
CUX1-210ENST00000497815 ELFN2Q5R3F8 820 aa10.32□□□□□ -0.76
CUX1-210ENST00000497815 HIST2H3PS2Q5TEC6 136 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms