RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 OTOGLQ3ZCN5 2332 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 TRAV27A0A087WT01 109 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 TEX13DA0A0J9YY54 714 aaPredicted RBP5.56□□□□□ -1.52
SSBP1-213ENST00000496622 RPS10-NUDT3A0A1W2PQS6 291 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 FITM1A5D6W6 292 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 ZAR1LA6NP61 321 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 NKX2-2O95096 273 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 PTHP01270 115 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 OSMP13725 252 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 ZNF28P17035 718 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 MAKP20794 623 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 ITGA3P26006 1051 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 SDHAP31040 664 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 RFC3P40938 356 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 GZMKP49863 264 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 BLOC1S1P78537 153 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 SCGB2A2Q13296 93 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 GINS1Q14691 196 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 OR1Q1Q15612 314 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 RBM48Q5RL73 367 aaKnown RBP5.56□□□□□ -1.52
SSBP1-213ENST00000496622 HACD4Q5VWC8 232 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 LAMTOR1Q6IAA8 161 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 TMEM71Q6P5X7 295 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 OVCH2Q7RTZ1 564 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 ZNF595Q8IYB9 648 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 ZFP82Q8N141 532 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 BCORP1Q8N888 145 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 BHLHE23Q8NDY6 225 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 OR13F1Q8NGS4 319 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 STT3BQ8TCJ2 826 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 ZNF675Q8TD23 568 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 DUSP19Q8WTR2 217 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 SLC38A4Q969I6 547 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 FAM210BQ96KR6 192 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 PITX2Q99697 317 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 ARHGDIGQ99819 225 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 PRSS27Q9BQR3 290 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 NUDT9Q9BW91 350 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 ZBTB20Q9HC78 741 aaPredicted RBP5.56□□□□□ -1.52
SSBP1-213ENST00000496622 MEPEQ9NQ76 525 aaPredicted RBP5.56□□□□□ -1.52
SSBP1-213ENST00000496622 KLHL28Q9NXS3 571 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 CAMK2AQ9UQM7 478 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 ATMQ13315 3056 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 ADAMTS20P59510 1910 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.56□□□□□ -1.52
SSBP1-213ENST00000496622 MPTX1A8MV57 137 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 KRBOX1C9JBD0 128 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 FAAHO00519 579 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 IMPA2O14732 288 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 KIAA0513O60268 411 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 FADS1O60427 444 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 SEC14L2O76054 403 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 ADAP00813 363 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 IGF2P01344 180 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 IFNA10P01566 189 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 PF4P02776 101 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 FAM87AP0C7U9 286 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 POU3F2P20265 443 aaPredicted RBP5.56□□□□□ -1.52
SSBP1-213ENST00000496622 GCH1P30793 250 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 LIPAP38571 399 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 NR0B1P51843 470 aaKnown RBP5.56□□□□□ -1.52
SSBP1-213ENST00000496622 SMSP52788 366 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 PER3P56645 1201 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 SLC37A1P57057 533 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 FXYD6P3P58550 94 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 AP3S2P59780 193 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 FUT7Q11130 342 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 ST3GAL3Q11203 375 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 CLLU1Q5K131 121 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 FAHD2BQ6P2I3 314 aaPredicted RBP5.56□□□□□ -1.52
SSBP1-213ENST00000496622 TEX261Q6UWH6 196 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 NDNFQ8TB73 568 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 SLC2A12Q8TD20 617 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 MUL1Q969V5 352 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 SLAMF9Q96A28 289 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 FAHD2AQ96GK7 314 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 LRR1Q96L50 414 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 GPN2Q9H9Y4 310 aaPredicted RBP5.56□□□□□ -1.52
SSBP1-213ENST00000496622 ACOT13Q9NPJ3 140 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 MCUBQ9NWR8 336 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 FBXL4Q9UKA2 621 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 CBLCQ9ULV8 474 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 KCNIP3Q9Y2W7 256 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 U3KQ87 197 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 CACNA1CQ13936 2221 aa5.56□□□□□ -1.52
SSBP1-213ENST00000496622 HEATR5AQ86XA9 2040 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 CEP250Q9BV73 2442 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 A0A1B0GX78 115 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 C4orf47A7E2U8 309 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 CLCA1A8K7I4 914 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 E9PQ18 207 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 H0YIG0 161 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 RGS10O43665 173 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 CHP2O43745 196 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 ALOX12BO75342 701 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 SCRG1O75711 98 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 RHBDL1O75783 438 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 DDAH2O95865 285 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 ZGLP1P0C6A0 271 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 TRAPPC2P0DI81 140 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms