RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 CAPRIN1Q14444 709 aaKnown RBP2.85□□□□□ -1.95
SMC4-224ENST00000494612 SGCAQ16586 387 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 TMEM183BQ1AE95 376 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 ZNF836Q6ZNA1 936 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 NIPA1Q7RTP0 329 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 C6orf120Q7Z4R8 191 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 FAM228AQ86W67 206 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 TMEM183AQ8IXX5 376 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 ZNF786Q8N393 782 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 VN1R2Q8NFZ6 395 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 OR56B2PQ8NGI1 322 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 PLPPR1Q8TBJ4 325 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 STMN2Q93045 179 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 CEP170P1Q96L14 293 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 SLC25A39Q9BZJ4 359 aaPredicted RBP2.85□□□□□ -1.95
SMC4-224ENST00000494612 COA1Q9GZY4 146 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 EXD2Q9NVH0 621 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 SLC2A8Q9NY64 477 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 KIAA1257Q9ULG3 409 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 PACSIN2Q9UNF0 486 aaPredicted RBP2.85□□□□□ -1.95
SMC4-224ENST00000494612 F11RQ9Y624 299 aaKnown RBP2.85□□□□□ -1.95
SMC4-224ENST00000494612 SSC5DA1L4H1 1573 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 MAPK8IP3Q9UPT6 1336 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 EYSQ5T1H1 3165 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 MED23Q9ULK4 1368 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 RANBP2P49792 3224 aaKnown RBP2.84□□□□□ -1.95
SMC4-224ENST00000494612 KIAA0100Q14667 2235 aaKnown RBP2.84□□□□□ -1.95
SMC4-224ENST00000494612 A0A1B0GVI7 797 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 NKX2-6A6NCS4 301 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 FAM47DPA6NHR8 397 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 ANKRD63C9JTQ0 380 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 H0Y8G0 127 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 CD5LO43866 347 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 CIB2O75838 187 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 CLIC3O95833 236 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 CST1P01037 141 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 FGF1P05230 155 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 C2P06681 752 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 MCF2P10911 925 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 ZNF30P17039 623 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 TNNI1P19237 187 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 IFNA8P32881 189 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 CXCL5P42830 114 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 NCBP2P52298 156 aaKnown RBP eCLIP2.84□□□□□ -1.95
SMC4-224ENST00000494612 FBXW4P57775 412 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 RPS21P63220 83 aaKnown RBP2.84□□□□□ -1.95
SMC4-224ENST00000494612 BEX3Q00994 111 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 BST2Q10589 180 aaKnown RBP2.84□□□□□ -1.95
SMC4-224ENST00000494612 ZSCAN26Q16670 478 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 PIGGQ5H8A4 983 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 OR52W1Q6IF63 320 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 Q6P435 159 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 ZYG11AQ6WRX3 759 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 NCCRP1Q6ZVX7 275 aaPredicted RBP2.84□□□□□ -1.95
SMC4-224ENST00000494612 TAS2R42Q7RTR8 314 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 Q8N9L7 120 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 DUSP18Q8NEJ0 188 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 OR10G9Q8NGN4 311 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 KCNG3Q8TAE7 436 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 RANBP3Q9H6Z4 567 aaPredicted RBP2.84□□□□□ -1.95
SMC4-224ENST00000494612 TM9SF3Q9HD45 589 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 INPP5EQ9NRR6 644 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 ZNF226Q9NYT6 803 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 STOX2Q9P2F5 926 aaPredicted RBP2.84□□□□□ -1.95
SMC4-224ENST00000494612 CSDC2Q9Y534 153 aaKnown RBP2.84□□□□□ -1.95
SMC4-224ENST00000494612 TRIOBPQ9H2D6 2365 aa2.84□□□□□ -1.95
SMC4-224ENST00000494612 NFASCO94856 1347 aa2.84□□□□□ -1.96
SMC4-224ENST00000494612 SPTBN5Q9NRC6 3674 aaKnown RBP2.83□□□□□ -1.96
SMC4-224ENST00000494612 LAMA3Q16787 3333 aa2.83□□□□□ -1.96
SMC4-224ENST00000494612 XKRY2A2RUG3 117 aa2.83□□□□□ -1.96
SMC4-224ENST00000494612 SMCO2A6NFE2 343 aa2.83□□□□□ -1.96
SMC4-224ENST00000494612 ZNF726A6NNF4 738 aa2.83□□□□□ -1.96
SMC4-224ENST00000494612 HIDE1A8MVS5 230 aa2.83□□□□□ -1.96
SMC4-224ENST00000494612 F6UB75 175 aa2.83□□□□□ -1.96
SMC4-224ENST00000494612 H3BNH8 94 aa2.83□□□□□ -1.96
SMC4-224ENST00000494612 KMOO15229 486 aa2.83□□□□□ -1.96
SMC4-224ENST00000494612 SLC31A2O15432 143 aa2.83□□□□□ -1.96
SMC4-224ENST00000494612 DFNA5O60443 496 aa2.83□□□□□ -1.96
SMC4-224ENST00000494612 SS18L1O75177 396 aaPredicted RBP2.83□□□□□ -1.96
SMC4-224ENST00000494612 HOXC4P09017 264 aaPredicted RBP2.83□□□□□ -1.96
SMC4-224ENST00000494612 VHLP40337 213 aa2.83□□□□□ -1.96
SMC4-224ENST00000494612 ACTA2P62736 377 aa2.83□□□□□ -1.96
SMC4-224ENST00000494612 ACTG2P63267 376 aa2.83□□□□□ -1.96
SMC4-224ENST00000494612 ACTC1P68032 377 aa2.83□□□□□ -1.96
SMC4-224ENST00000494612 ACTA1P68133 377 aa2.83□□□□□ -1.96
SMC4-224ENST00000494612 CCNA1P78396 465 aa2.83□□□□□ -1.96
SMC4-224ENST00000494612 AGBL2Q5U5Z8 902 aa2.83□□□□□ -1.96
SMC4-224ENST00000494612 ACTRT1Q8TDG2 376 aa2.83□□□□□ -1.96
SMC4-224ENST00000494612 SRSF12Q8WXF0 261 aaKnown RBP2.83□□□□□ -1.96
SMC4-224ENST00000494612 AURKBQ96GD4 344 aaPredicted RBP2.83□□□□□ -1.96
SMC4-224ENST00000494612 ZBED3Q96IU2 234 aaPredicted RBP2.83□□□□□ -1.96
SMC4-224ENST00000494612 RPF2Q9H7B2 306 aaKnown RBP2.83□□□□□ -1.96
SMC4-224ENST00000494612 DMAP1Q9NPF5 467 aaPredicted RBP2.83□□□□□ -1.96
SMC4-224ENST00000494612 KLK12Q9UKR0 248 aa2.83□□□□□ -1.96
SMC4-224ENST00000494612 MGAMO43451 1857 aa2.83□□□□□ -1.96
SMC4-224ENST00000494612 ALPK3Q96L96 1907 aa2.83□□□□□ -1.96
SMC4-224ENST00000494612 VCANP13611 3396 aa2.83□□□□□ -1.96
SMC4-224ENST00000494612 DDX60LQ5H9U9 1706 aaKnown RBP2.82□□□□□ -1.96
SMC4-224ENST00000494612 ARAP2Q8WZ64 1704 aa2.82□□□□□ -1.96
SMC4-224ENST00000494612 MYH3P11055 1940 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms