RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 GBX2P52951 348 aaPredicted RBP18.16■□□□□ 0.5
KPNA1-210ENST00000494339 TRAM1Q15629 374 aa18.16■□□□□ 0.5
KPNA1-210ENST00000494339 FOXL2NBQ6ZUU3 175 aa18.16■□□□□ 0.5
KPNA1-210ENST00000494339 CD163Q86VB7 1156 aa18.16■□□□□ 0.5
KPNA1-210ENST00000494339 LRRC18Q8N456 261 aa18.16■□□□□ 0.5
KPNA1-210ENST00000494339 CPT1CQ8TCG5 803 aa18.16■□□□□ 0.5
KPNA1-210ENST00000494339 HAVCR2Q8TDQ0 301 aa18.16■□□□□ 0.5
KPNA1-210ENST00000494339 ST7LQ8TDW4 575 aa18.16■□□□□ 0.5
KPNA1-210ENST00000494339 WNT2BQ93097 391 aa18.16■□□□□ 0.5
KPNA1-210ENST00000494339 NABP1Q96AH0 204 aa18.16■□□□□ 0.5
KPNA1-210ENST00000494339 ZNF416Q9BWM5 594 aa18.16■□□□□ 0.5
KPNA1-210ENST00000494339 ASF1BQ9NVP2 202 aa18.16■□□□□ 0.5
KPNA1-210ENST00000494339 ASH2LQ9UBL3 628 aa18.16■□□□□ 0.5
KPNA1-210ENST00000494339 ABHD16AO95870 558 aa18.15■□□□□ 0.5
KPNA1-210ENST00000494339 ABOP16442 354 aa18.15■□□□□ 0.5
KPNA1-210ENST00000494339 KCNMB1Q16558 191 aa18.15■□□□□ 0.5
KPNA1-210ENST00000494339 UBE2J2Q8N2K1 259 aa18.15■□□□□ 0.5
KPNA1-210ENST00000494339 OR52N5Q8NH56 324 aa18.15■□□□□ 0.5
KPNA1-210ENST00000494339 TRMT61AQ96FX7 289 aaKnown RBP18.15■□□□□ 0.5
KPNA1-210ENST00000494339 KCTD7Q96MP8 289 aa18.15■□□□□ 0.5
KPNA1-210ENST00000494339 OR8B4Q96RC9 309 aa18.15■□□□□ 0.5
KPNA1-210ENST00000494339 TM9SF2Q99805 663 aa18.15■□□□□ 0.5
KPNA1-210ENST00000494339 LINC00470Q9BZP3 86 aa18.15■□□□□ 0.5
KPNA1-210ENST00000494339 MMP27Q9H306 513 aa18.15■□□□□ 0.5
KPNA1-210ENST00000494339 GLRX2Q9NS18 164 aa18.15■□□□□ 0.5
KPNA1-210ENST00000494339 SS18L1O75177 396 aaPredicted RBP18.15■□□□□ 0.5
KPNA1-210ENST00000494339 SULT1C4O75897 302 aa18.15■□□□□ 0.5
KPNA1-210ENST00000494339 TACSTD2P09758 323 aa18.15■□□□□ 0.5
KPNA1-210ENST00000494339 B4GALT1P15291 398 aa18.15■□□□□ 0.5
KPNA1-210ENST00000494339 SIRPAP78324 504 aa18.15■□□□□ 0.5
KPNA1-210ENST00000494339 ZNF404Q494X3 552 aa18.15■□□□□ 0.5
KPNA1-210ENST00000494339 CCDC58Q4VC31 144 aa18.15■□□□□ 0.5
KPNA1-210ENST00000494339 LIPNQ5VXI9 398 aa18.15■□□□□ 0.5
KPNA1-210ENST00000494339 NSUN5P2Q63ZY6 315 aa18.15■□□□□ 0.5
KPNA1-210ENST00000494339 KCTD18Q6PI47 426 aaPredicted RBP18.15■□□□□ 0.5
KPNA1-210ENST00000494339 ARL9Q6T311 187 aa18.15■□□□□ 0.5
KPNA1-210ENST00000494339 KRT77Q7Z794 578 aa18.15■□□□□ 0.5
KPNA1-210ENST00000494339 OR2AJ1Q8NGZ0 328 aa18.15■□□□□ 0.5
KPNA1-210ENST00000494339 MAP6Q96JE9 813 aa18.15■□□□□ 0.5
KPNA1-210ENST00000494339 SLX1AQ9BQ83 275 aa18.15■□□□□ 0.5
KPNA1-210ENST00000494339 MROQ9BYG7 248 aa18.15■□□□□ 0.5
KPNA1-210ENST00000494339 ELOVL3Q9HB03 270 aa18.15■□□□□ 0.5
KPNA1-210ENST00000494339 UPB1Q9UBR1 384 aa18.15■□□□□ 0.5
KPNA1-210ENST00000494339 GDF2Q9UK05 429 aaPredicted RBP18.15■□□□□ 0.5
KPNA1-210ENST00000494339 PMF1-BGLAPU3KQ54 211 aa18.15■□□□□ 0.5
KPNA1-210ENST00000494339 EPG5Q9HCE0 2579 aa18.14■□□□□ 0.49
KPNA1-210ENST00000494339 MRPS34P82930 218 aaKnown RBP18.14■□□□□ 0.49
KPNA1-210ENST00000494339 FABP5Q01469 135 aa18.14■□□□□ 0.49
KPNA1-210ENST00000494339 KLRB1Q12918 225 aa18.14■□□□□ 0.49
KPNA1-210ENST00000494339 C9orf135Q5VTT2 229 aa18.14■□□□□ 0.49
KPNA1-210ENST00000494339 CFAP77Q6ZQR2 320 aa18.14■□□□□ 0.49
KPNA1-210ENST00000494339 ZNF679Q8IYX0 411 aa18.14■□□□□ 0.49
KPNA1-210ENST00000494339 MCFD2Q8NI22 146 aa18.14■□□□□ 0.49
KPNA1-210ENST00000494339 FOXB1Q99853 325 aa18.14■□□□□ 0.49
KPNA1-210ENST00000494339 TMED9Q9BVK6 235 aa18.14■□□□□ 0.49
KPNA1-210ENST00000494339 TMEM38BQ9NVV0 291 aa18.14■□□□□ 0.49
KPNA1-210ENST00000494339 PRSS50Q9UI38 385 aa18.14■□□□□ 0.49
KPNA1-210ENST00000494339 SPTA1P02549 2419 aa18.14■□□□□ 0.49
KPNA1-210ENST00000494339 OR6C65A6NJZ3 312 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 ZNF587BE7ETH6 402 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 IL1AP01583 271 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 LSM6P62312 80 aaKnown RBP18.13■□□□□ 0.49
KPNA1-210ENST00000494339 SLC3A1Q07837 685 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 MRPL28Q13084 256 aaKnown RBP18.13■□□□□ 0.49
KPNA1-210ENST00000494339 ENDOGQ14249 297 aaKnown RBP18.13■□□□□ 0.49
KPNA1-210ENST00000494339 DMKNQ6E0U4 476 aaPredicted RBP18.13■□□□□ 0.49
KPNA1-210ENST00000494339 C22orf42Q6IC83 251 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 OR7E24Q6IFN5 339 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 C3P1Q6ZMU1 363 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 FAM57AQ8TBR7 257 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 HSD17B8Q92506 261 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 MED18Q9BUE0 208 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 NXF2Q9GZY0 626 aaKnown RBP18.13■□□□□ 0.49
KPNA1-210ENST00000494339 KCNN2Q9H2S1 579 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 C1orf198Q9H425 327 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 CENPMQ9NSP4 180 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 ST6GALNAC2Q9UJ37 374 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 CD8B2A6NJW9 211 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 FIGNL2A6NMB9 653 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 RER1O15258 196 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 OGG1O15527 345 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 WDR1O75083 606 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 CD1AP06126 327 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 INHBBP09529 407 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 GABRA1P14867 456 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 ROM1Q03395 351 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 FAPQ12884 760 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 SF3B4Q15427 424 aaKnown RBP eCLIP18.13■□□□□ 0.496e-7■■■■■ 30.8
KPNA1-210ENST00000494339 RTL6Q6ICC9 239 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 RPL22L1Q6P5R6 122 aaKnown RBP18.13■□□□□ 0.49
KPNA1-210ENST00000494339 GFRALQ6UXV0 394 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 FAM214BQ7L5A3 538 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 CNEP1R1Q8N9A8 125 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 SLAMF6Q96DU3 332 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 SH3GL3Q99963 347 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 LRP12Q9Y561 859 aa18.13■□□□□ 0.49
KPNA1-210ENST00000494339 ATRXP46100 2492 aa18.12■□□□□ 0.49
KPNA1-210ENST00000494339 GABRPO00591 440 aa18.12■□□□□ 0.49
KPNA1-210ENST00000494339 RGS9O75916 674 aaPredicted RBP18.12■□□□□ 0.49
KPNA1-210ENST00000494339 NPR2P20594 1047 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms