RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 CNN2Q99439 309 aaKnown RBP12.67□□□□□ -0.38
BRCA1-223ENST00000494123 KCNS3Q9BQ31 491 aa12.67□□□□□ -0.38
BRCA1-223ENST00000494123 C1orf198Q9H425 327 aa12.67□□□□□ -0.38
BRCA1-223ENST00000494123 MARCH7Q9H992 704 aa12.67□□□□□ -0.38
BRCA1-223ENST00000494123 PLEK2Q9NYT0 353 aa12.67□□□□□ -0.38
BRCA1-223ENST00000494123 CRNNQ9UBG3 495 aaPredicted RBP12.67□□□□□ -0.38
BRCA1-223ENST00000494123 CYB5R1Q9UHQ9 305 aa12.67□□□□□ -0.38
BRCA1-223ENST00000494123 PRR14LQ5THK1 2151 aa12.67□□□□□ -0.38
BRCA1-223ENST00000494123 IGHV1-18A0A0C4DH31 117 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 A6NNC1 897 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 RER1O15258 196 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 DOK2O60496 412 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 CELA3BP08861 270 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 CECR9P0C854 216 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 ZNF14P17017 642 aaPredicted RBP12.66□□□□□ -0.38
BRCA1-223ENST00000494123 CD40P25942 277 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 APLNRP35414 380 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 BSPH1Q075Z2 132 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 TMED1Q13445 227 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 DAZAP2Q15038 168 aaPredicted RBP12.66□□□□□ -0.38
BRCA1-223ENST00000494123 C3orf36Q3SXR2 165 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 TEX30Q5JUR7 227 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 SLC18B1Q6NT16 456 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 ZNF774Q6NX45 483 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 TMEM154Q6P9G4 183 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 SHFQ7M4L6 423 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 DPY19L4Q7Z388 723 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 TIGD4Q8IY51 512 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 OR51G2Q8NGK0 314 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 MS4A3Q96HJ5 214 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 ZNF184Q99676 751 aaPredicted RBP12.66□□□□□ -0.38
BRCA1-223ENST00000494123 WNT5BQ9H1J7 359 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 HAO2Q9NYQ3 351 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 GDF2Q9UK05 429 aaPredicted RBP12.66□□□□□ -0.38
BRCA1-223ENST00000494123 PTPN13Q12923 2485 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 DPRXA6NFQ7 191 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 ABCD4O14678 606 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 IGLV1-44P01699 117 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 CRYAAP02489 173 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 SERPINA5P05154 406 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 CD3EP07766 207 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 APEX1P27695 318 aaKnown RBP12.66□□□□□ -0.38
BRCA1-223ENST00000494123 MTNR1AP48039 350 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 ISL1P61371 349 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 POU4F2Q12837 409 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 EIF2B1Q14232 305 aaKnown RBP12.66□□□□□ -0.38
BRCA1-223ENST00000494123 GGTLC2Q14390 218 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 RAB35Q15286 201 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 TBC1D28Q2M2D7 210 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 NCMAPQ5T1S8 102 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 USP51Q70EK9 711 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 SLC16A9Q7RTY1 509 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 DCXRQ7Z4W1 244 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 THAP5Q7Z6K1 395 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 PIAS4Q8N2W9 510 aaPredicted RBP12.66□□□□□ -0.38
BRCA1-223ENST00000494123 SLC30A7Q8NEW0 376 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 CNIH3Q8TBE1 160 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 APH1BQ8WW43 257 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 RAB26Q9ULW5 256 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 PKDREJQ9NTG1 2253 aa12.66□□□□□ -0.38
BRCA1-223ENST00000494123 DEFB108AA8MXU0 73 aa12.65□□□□□ -0.38
BRCA1-223ENST00000494123 GOSR1O95249 250 aa12.65□□□□□ -0.38
BRCA1-223ENST00000494123 STOMP27105 288 aa12.65□□□□□ -0.38
BRCA1-223ENST00000494123 HTR5AP47898 357 aa12.65□□□□□ -0.38
BRCA1-223ENST00000494123 NUDT6P53370 316 aa12.65□□□□□ -0.38
BRCA1-223ENST00000494123 PCK2Q16822 640 aa12.65□□□□□ -0.38
BRCA1-223ENST00000494123 CFAP77Q6ZQR2 320 aa12.65□□□□□ -0.38
BRCA1-223ENST00000494123 VASH1Q7L8A9 365 aaPredicted RBP12.65□□□□□ -0.38
BRCA1-223ENST00000494123 MYPOPQ86VE0 399 aaPredicted RBP12.65□□□□□ -0.38
BRCA1-223ENST00000494123 ZNF584Q8IVC4 421 aa12.65□□□□□ -0.38
BRCA1-223ENST00000494123 ZNF454Q8N9F8 522 aa12.65□□□□□ -0.38
BRCA1-223ENST00000494123 CPEB3Q8NE35 698 aaKnown RBP12.65□□□□□ -0.38
BRCA1-223ENST00000494123 IL17RDQ8NFM7 739 aa12.65□□□□□ -0.38
BRCA1-223ENST00000494123 OR1J2Q8NGS2 313 aa12.65□□□□□ -0.38
BRCA1-223ENST00000494123 THEM6Q8WUY1 208 aa12.65□□□□□ -0.38
BRCA1-223ENST00000494123 RNFT2Q96EX2 444 aa12.65□□□□□ -0.38
BRCA1-223ENST00000494123 RADILQ96JH8 1075 aa12.65□□□□□ -0.38
BRCA1-223ENST00000494123 ZNF75AQ96N20 296 aa12.65□□□□□ -0.38
BRCA1-223ENST00000494123 YIPF3Q9GZM5 350 aa12.65□□□□□ -0.38
BRCA1-223ENST00000494123 HDHD2Q9H0R4 259 aa12.65□□□□□ -0.38
BRCA1-223ENST00000494123 Q9H521 79 aa12.65□□□□□ -0.38
BRCA1-223ENST00000494123 CDH20Q9HBT6 801 aa12.65□□□□□ -0.38
BRCA1-223ENST00000494123 ADGRL4Q9HBW9 690 aa12.65□□□□□ -0.38
BRCA1-223ENST00000494123 LAMP5Q9UJQ1 280 aa12.65□□□□□ -0.38
BRCA1-223ENST00000494123 SIAH2O43255 324 aa12.64□□□□□ -0.39
BRCA1-223ENST00000494123 SBK2P0C263 348 aa12.64□□□□□ -0.39
BRCA1-223ENST00000494123 PSKH1P11801 424 aa12.64□□□□□ -0.39
BRCA1-223ENST00000494123 CCNOP22674 350 aa12.64□□□□□ -0.39
BRCA1-223ENST00000494123 GDI2P50395 445 aaKnown RBP12.64□□□□□ -0.39
BRCA1-223ENST00000494123 HIST1H3AP68431 136 aa12.64□□□□□ -0.39
BRCA1-223ENST00000494123 NAAAQ02083 359 aa12.64□□□□□ -0.39
BRCA1-223ENST00000494123 CCDC92Q53HC0 331 aaPredicted RBP12.64□□□□□ -0.39
BRCA1-223ENST00000494123 ELFN2Q5R3F8 820 aa12.64□□□□□ -0.39
BRCA1-223ENST00000494123 HIST2H3PS2Q5TEC6 136 aa12.64□□□□□ -0.39
BRCA1-223ENST00000494123 HIST2H2BCQ6DN03 193 aa12.64□□□□□ -0.39
BRCA1-223ENST00000494123 SLC22A25Q6T423 547 aa12.64□□□□□ -0.39
BRCA1-223ENST00000494123 HIST2H3AQ71DI3 136 aa12.64□□□□□ -0.39
BRCA1-223ENST00000494123 SLC35F2Q8IXU6 374 aa12.64□□□□□ -0.39
BRCA1-223ENST00000494123 OR1F12Q8NHA8 337 aa12.64□□□□□ -0.39
BRCA1-223ENST00000494123 OTOSQ8NHW6 89 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms