RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 ATXN3P54252 364 aaPredicted RBP2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 SPCS3P61009 180 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 ZXDBP98169 803 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 CSHL1Q14406 222 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 OPCMLQ14982 345 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 ATP6AP1LQ52LC2 224 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 C1orf100Q5SVJ3 147 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 SPATA46Q5T0L3 261 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 MPP7Q5T2T1 576 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 DCAF12L2Q5VW00 463 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 ZNF474Q6S9Z5 364 aaPredicted RBP2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 TMPRSS11AQ6ZMR5 421 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 FOXL2NBQ6ZUU3 175 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 SMIM5Q71RC9 77 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 FAM57BQ71RH2 274 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 RNF149Q8NC42 400 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 TMEM185AQ8NFB2 350 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 BPIFCQ8NFQ6 507 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR4K5Q8NGD3 323 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 SFT2D1Q8WV19 159 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 HIST1H2BAQ96A08 127 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 SMIM19Q96E16 107 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 F2RL3Q96RI0 385 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 MS4A8Q9BY19 250 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 NKX6-2Q9C056 277 aaPredicted RBP2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 LRTM1Q9HBL6 345 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 NOX4Q9NPH5 578 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 MBNL1Q9NR56 388 aaKnown RBP2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 MMP26Q9NRE1 261 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 GLRX2Q9NS18 164 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 NLGN3Q9NZ94 848 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 PDP1Q9P0J1 537 aaPredicted RBP2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 PROCRQ9UNN8 238 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 YARS2Q9Y2Z4 477 aaKnown RBP2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 SNX10Q9Y5X0 201 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 CHD9Q3L8U1 2897 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 LOC105369274A0A096LPK9 316 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 A0A0A6YYH2 397 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 TRAV1-1A0A0B4J248 108 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 TRAV34A0A0B4J273 112 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 LOC102723532A0A0G2JNH3 316 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 A0A1W2PQF6 199 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 A6NJ64 397 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 PDZK1P1A8MUH7 402 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 TRDCB7Z8K6 153 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 K7ERQ8 282 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 NDUFS8O00217 210 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 MFNGO00587 321 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 CHMP2AO43633 222 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 TLX3O43711 291 aaPredicted RBP2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 LRATO95237 230 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR2C1O95371 312 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 RLN2P04090 185 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 GAPDHP04406 335 aaKnown RBP2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 TYMSP04818 313 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 PRG2P13727 222 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 PKMP14618 531 aaKnown RBP2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 RAB4AP20338 218 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 CNR1P21554 472 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 EEF1B2P24534 225 aaKnown RBP2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 ALDH4A1P30038 563 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 CTRLP40313 264 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 KIR3DL2P43630 455 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 TTPAP49638 278 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 NR0B1P51843 470 aaKnown RBP2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 TAS2R60P59551 318 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 RPS20P60866 119 aaKnown RBP2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 UBE2MP61081 183 aaKnown RBP2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 HBA1P69905 142 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 REEP5Q00765 189 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 HNF4GQ14541 408 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 MEP1BQ16820 701 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 MORN2Q502X0 79 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR2G6Q5TZ20 316 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 RSBN1Q5VWQ0 802 aaPredicted RBP2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 DGAT2L7PQ6IED9 249 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 SLC25A24Q6NUK1 477 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 ACOT1Q86TX2 421 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 PARGQ86W56 976 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR4N4Q8N0Y3 316 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 SPATA6LQ8N4H0 392 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 C19orf18Q8NEA5 215 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR5M1Q8NGP8 315 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR13D1Q8NGV5 346 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR14A16Q8NHC5 309 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 GPR148Q8TDV2 347 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 ABHD5Q8WTS1 349 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 AP3S1Q92572 193 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 SGTBQ96EQ0 304 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 LINGO1Q96FE5 620 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 PIK3IP1Q96FE7 263 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 CELF6Q96J87 481 aaKnown RBP2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 FAM210BQ96KR6 192 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 KCNS3Q9BQ31 491 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 NLNQ9BYT8 704 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 WNT5BQ9H1J7 359 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 XKR8Q9H6D3 395 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 RPF1Q9H9Y2 349 aaKnown RBP2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 FGF22Q9HCT0 170 aa2.22□□□□□ -2.05
CDC42EP3-205ENST00000494083 C12orf4Q9NQ89 552 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms