RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 GUSBP1Q15486 140 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 KLHL12Q53G59 568 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 NUFIP2Q7Z417 695 aaKnown RBP10.64□□□□□ -0.71
UPF3A-210ENST00000493727 CPOQ8IVL8 374 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 GID4Q8IVV7 300 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 UBE2J2Q8N2K1 259 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 GPR137CQ8N3F9 429 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 NPEPL1Q8NDH3 523 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 PROKR2Q8NFJ6 384 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 OR6K3Q8NGY3 331 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 SPATA3Q8NHX4 192 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 CNIH3Q8TBE1 160 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 FNDC8Q8TC99 324 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 PIK3IP1Q96FE7 263 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 LRR1Q96L50 414 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 SNX18Q96RF0 628 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 CCL19Q99731 98 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 ULBP2Q9BZM5 246 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 OR51V1Q9H2C8 321 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 SLCO5A1Q9H2Y9 848 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 MED20Q9H944 212 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 HINT3Q9NQE9 182 aaKnown RBP10.64□□□□□ -0.71
UPF3A-210ENST00000493727 VSX1Q9NZR4 365 aaPredicted RBP10.64□□□□□ -0.71
UPF3A-210ENST00000493727 UPB1Q9UBR1 384 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 DUSP13Q9UII6 198 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 USF3Q68DE3 2245 aa10.64□□□□□ -0.71
UPF3A-210ENST00000493727 PRR14LQ5THK1 2151 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 OR6C68A6NDL8 312 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 SNTNA6NMZ2 147 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 SHOXO15266 292 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 DENRO43583 198 aaKnown RBP10.63□□□□□ -0.71
UPF3A-210ENST00000493727 TMCC2O75069 709 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 GYPBP06028 91 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 CRABP1P29762 137 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 CCKARP32238 428 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 SLC25A1P53007 311 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 CDH11P55287 796 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 Q5PR19 223 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 THEM4Q5T1C6 240 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 LCN1P1Q5VSP4 162 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 MEDAGQ5VYS4 303 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 NHLRC1Q6VVB1 395 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 BCDIN3DQ7Z5W3 292 aaKnown RBP10.63□□□□□ -0.71
UPF3A-210ENST00000493727 WDFY1Q8IWB7 410 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 C20orf196Q8IYI0 205 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 TMEM123Q8N131 208 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 ZNF610Q8N9Z0 462 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 BBS1Q8NFJ9 593 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 OR6K6Q8NGW6 343 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 OR2T4Q8NH00 348 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 RHOXF1Q8NHV9 184 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 NSMAFQ92636 917 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 RFKQ969G6 155 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 ALKBH3Q96Q83 286 aaPredicted RBP10.63□□□□□ -0.71
UPF3A-210ENST00000493727 UBTD1Q9HAC8 227 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 PLSCR4Q9NRQ2 329 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 GLTPQ9NZD2 209 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 AASSQ9UDR5 926 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 LRCH1Q9Y2L9 728 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 LRRC42Q9Y546 428 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 FREM1Q5H8C1 2179 aa10.63□□□□□ -0.71
UPF3A-210ENST00000493727 ANK2Q01484 3957 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 ZNF587BE7ETH6 402 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 H7C1Q1 480 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 PRODHO43272 600 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 SLC16A7O60669 478 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 FAM20BO75063 409 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 ENTPD6O75354 484 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 KHDRBS3O75525 346 aaKnown RBP10.62□□□□□ -0.71
UPF3A-210ENST00000493727 ZNF432O94892 652 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 IGHV3-9P01782 118 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 HLA-DQA2P01906 255 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 QDPRP09417 244 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 SPI1P17947 270 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 FMO3P31513 532 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 PYCR1P32322 319 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 ZNF84P51523 738 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 NUDT6P53370 316 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 NR1H2P55055 460 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 ISL1P61371 349 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 FMODQ06828 376 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 APOFQ13790 326 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 BEX5Q5H9J7 111 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 NXNL2Q5VZ03 156 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 ABHD12BQ7Z5M8 362 aaPredicted RBP10.62□□□□□ -0.71
UPF3A-210ENST00000493727 ZNF786Q8N393 782 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 POMGNT2Q8NAT1 580 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 OR51L1Q8NGJ5 315 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 TMEM54Q969K7 222 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 MCHR2Q969V1 340 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 ANAPC16Q96DE5 110 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 ZNF582Q96NG8 517 aaPredicted RBP10.62□□□□□ -0.71
UPF3A-210ENST00000493727 TSSK2Q96PF2 358 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 MRPL13Q9BYD1 178 aaKnown RBP10.62□□□□□ -0.71
UPF3A-210ENST00000493727 NUAK2Q9H093 628 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 OR10A4Q9H209 315 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.62□□□□□ -0.71
UPF3A-210ENST00000493727 FKBP7Q9Y680 259 aa10.62□□□□□ -0.71
UPF3A-210ENST00000493727 ABCA1O95477 2261 aa10.61□□□□□ -0.71
UPF3A-210ENST00000493727 A0A1W2PPL8 197 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms