RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 AGFG1P52594 562 aaKnown RBP8.93□□□□□ -0.98
PRPF3-206ENST00000493553 HCCSP53701 268 aa8.93□□□□□ -0.98
PRPF3-206ENST00000493553 BIDP55957 195 aa8.93□□□□□ -0.98
PRPF3-206ENST00000493553 FOXL2P58012 376 aa8.93□□□□□ -0.98
PRPF3-206ENST00000493553 AP3S2P59780 193 aa8.93□□□□□ -0.98
PRPF3-206ENST00000493553 RPS11P62280 158 aaKnown RBP eCLIP8.93□□□□□ -0.98
PRPF3-206ENST00000493553 LCN6P62502 163 aa8.93□□□□□ -0.98
PRPF3-206ENST00000493553 EIF2B1Q14232 305 aaKnown RBP8.93□□□□□ -0.98
PRPF3-206ENST00000493553 ZNF79Q15937 498 aa8.93□□□□□ -0.98
PRPF3-206ENST00000493553 MEP1BQ16820 701 aa8.93□□□□□ -0.98
PRPF3-206ENST00000493553 UBE2NLQ5JXB2 153 aa8.93□□□□□ -0.98
PRPF3-206ENST00000493553 ABHD17BQ5VST6 288 aa8.93□□□□□ -0.98
PRPF3-206ENST00000493553 RAET1LQ5VY80 246 aa8.93□□□□□ -0.98
PRPF3-206ENST00000493553 CCBE1Q6UXH8 406 aaPredicted RBP8.93□□□□□ -0.98
PRPF3-206ENST00000493553 DRAXINQ8NBI3 349 aaPredicted RBP8.93□□□□□ -0.98
PRPF3-206ENST00000493553 CCDC54Q8NEL0 328 aa8.93□□□□□ -0.98
PRPF3-206ENST00000493553 OR2AJ1Q8NGZ0 328 aa8.93□□□□□ -0.98
PRPF3-206ENST00000493553 TRMT10AQ8TBZ6 339 aaKnown RBP8.93□□□□□ -0.98
PRPF3-206ENST00000493553 ZNRF4Q8WWF5 429 aa8.93□□□□□ -0.98
PRPF3-206ENST00000493553 OR14A2Q96R54 314 aa8.93□□□□□ -0.98
PRPF3-206ENST00000493553 KLHDC3Q9BQ90 382 aa8.93□□□□□ -0.98
PRPF3-206ENST00000493553 ABHD6Q9BV23 337 aa8.93□□□□□ -0.98
PRPF3-206ENST00000493553 MRPL13Q9BYD1 178 aaKnown RBP8.93□□□□□ -0.98
PRPF3-206ENST00000493553 NOX4Q9NPH5 578 aa8.93□□□□□ -0.98
PRPF3-206ENST00000493553 COPZ2Q9P299 210 aa8.93□□□□□ -0.98
PRPF3-206ENST00000493553 EXTL2Q9UBQ6 330 aa8.93□□□□□ -0.98
PRPF3-206ENST00000493553 CAMK2AQ9UQM7 478 aa8.93□□□□□ -0.98
PRPF3-206ENST00000493553 R4GMQ9 66 aa8.93□□□□□ -0.98
PRPF3-206ENST00000493553 TRIOO75962 3097 aa8.93□□□□□ -0.98
PRPF3-206ENST00000493553 A0A0G2JK05 382 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 A0A1W2PQ09 198 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 ANXA2P2A6NMY6 339 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 IFITM5A6NNB3 132 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 RPP14O95059 124 aaKnown RBP8.92□□□□□ -0.98
PRPF3-206ENST00000493553 ISG15P05161 165 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 ANXA2P07355 339 aaKnown RBP8.92□□□□□ -0.98
PRPF3-206ENST00000493553 H2BFMP0C1H6 154 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 CNR1P21554 472 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 PSMB10P40306 273 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 LSM6P62312 80 aaKnown RBP8.92□□□□□ -0.98
PRPF3-206ENST00000493553 AIMP2Q13155 320 aaKnown RBP8.92□□□□□ -0.98
PRPF3-206ENST00000493553 TOMM20Q15388 145 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 KRTAP19-4Q3LI73 84 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 CCDC157Q569K6 752 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 PRAMEF20Q5VT98 475 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 BICRALQ6AI39 1079 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 NHLRC1Q6VVB1 395 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 GDPD3Q7L5L3 318 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 ZNF227Q86WZ6 799 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 FAM83FQ8NEG4 500 aaPredicted RBP8.92□□□□□ -0.98
PRPF3-206ENST00000493553 ENKURQ8TC29 256 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 RNF133Q8WVZ7 376 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 TSEN15Q8WW01 171 aaKnown RBP8.92□□□□□ -0.98
PRPF3-206ENST00000493553 RFT1Q96AA3 541 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 FOXRED1Q96CU9 486 aaPredicted RBP8.92□□□□□ -0.98
PRPF3-206ENST00000493553 S100A16Q96FQ6 103 aaKnown RBP8.92□□□□□ -0.98
PRPF3-206ENST00000493553 ZC3HAV1LQ96H79 300 aaKnown RBP8.92□□□□□ -0.98
PRPF3-206ENST00000493553 TXNDC15Q96J42 360 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 DCLRE1CQ96SD1 692 aaKnown RBP8.92□□□□□ -0.98
PRPF3-206ENST00000493553 SDHCQ99643 169 aaPredicted RBP8.92□□□□□ -0.98
PRPF3-206ENST00000493553 PDCD1LG2Q9BQ51 273 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 FAM173AQ9BQD7 235 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 UTP23Q9BRU9 249 aaKnown RBP8.92□□□□□ -0.98
PRPF3-206ENST00000493553 WACQ9BTA9 647 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 C1orf198Q9H425 327 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 ZNF552Q9H707 407 aaPredicted RBP8.92□□□□□ -0.98
PRPF3-206ENST00000493553 B3GAT2Q9NPZ5 323 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 SLC17A5Q9NRA2 495 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 ZNF275Q9NSD4 429 aaPredicted RBP8.92□□□□□ -0.98
PRPF3-206ENST00000493553 RBFOX1Q9NWB1 397 aaKnown RBP8.92□□□□□ -0.98
PRPF3-206ENST00000493553 MRPL22Q9NWU5 206 aaKnown RBP8.92□□□□□ -0.98
PRPF3-206ENST00000493553 SLCO1C1Q9NYB5 712 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 FBXL2Q9UKC9 423 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 HHLA2Q9UM44 414 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 FOXJ3Q9UPW0 622 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 RCE1Q9Y256 329 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 COA3Q9Y2R0 106 aaPredicted RBP8.92□□□□□ -0.98
PRPF3-206ENST00000493553 R4GN57 208 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 AHCTF1Q8WYP5 2266 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 MPDZO75970 2070 aa8.92□□□□□ -0.98
PRPF3-206ENST00000493553 OR2M5A3KFT3 312 aa8.91□□□□□ -0.98
PRPF3-206ENST00000493553 NPIPA2E9PIF3 369 aa8.91□□□□□ -0.98
PRPF3-206ENST00000493553 NPIPA3F8WFD2 350 aa8.91□□□□□ -0.98
PRPF3-206ENST00000493553 GSTZ1O43708 216 aaPredicted RBP8.91□□□□□ -0.98
PRPF3-206ENST00000493553 TRAF3IP2O43734 574 aaPredicted RBP8.91□□□□□ -0.98
PRPF3-206ENST00000493553 EFNA2O43921 213 aa8.91□□□□□ -0.98
PRPF3-206ENST00000493553 RAD1O60671 282 aa8.91□□□□□ -0.98
PRPF3-206ENST00000493553 CSF3P09919 207 aa8.91□□□□□ -0.98
PRPF3-206ENST00000493553 PGA4P0DJD7 388 aa8.91□□□□□ -0.98
PRPF3-206ENST00000493553 PGA3P0DJD8 388 aa8.91□□□□□ -0.98
PRPF3-206ENST00000493553 CCL3P10147 92 aa8.91□□□□□ -0.98
PRPF3-206ENST00000493553 ELK1P19419 428 aa8.91□□□□□ -0.98
PRPF3-206ENST00000493553 THBS2P35442 1172 aa8.91□□□□□ -0.98
PRPF3-206ENST00000493553 DLSTP36957 453 aa8.91□□□□□ -0.98
PRPF3-206ENST00000493553 MNDAP41218 407 aa8.91□□□□□ -0.98
PRPF3-206ENST00000493553 MMP15P51511 669 aa8.91□□□□□ -0.98
PRPF3-206ENST00000493553 ZNF84P51523 738 aa8.91□□□□□ -0.98
PRPF3-206ENST00000493553 ZNF133P52736 654 aaPredicted RBP8.91□□□□□ -0.98
PRPF3-206ENST00000493553 RRADP55042 308 aa8.91□□□□□ -0.98
PRPF3-206ENST00000493553 NANOS3P60323 173 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms