RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 RAB39AQ14964 217 aa10.93□□□□□ -0.66
SEC61A1-206ENST00000491668 ZIK1Q3SY52 487 aaPredicted RBP10.93□□□□□ -0.66
SEC61A1-206ENST00000491668 ARMC4Q5T2S8 1044 aa10.93□□□□□ -0.66
SEC61A1-206ENST00000491668 C6orf52Q5T4I8 152 aa10.93□□□□□ -0.66
SEC61A1-206ENST00000491668 ADCK1Q86TW2 530 aa10.93□□□□□ -0.66
SEC61A1-206ENST00000491668 SLC22A24Q8N4F4 322 aa10.93□□□□□ -0.66
SEC61A1-206ENST00000491668 PAQR4Q8N4S7 273 aaPredicted RBP10.93□□□□□ -0.66
SEC61A1-206ENST00000491668 IQCF1Q8N6M8 205 aa10.93□□□□□ -0.66
SEC61A1-206ENST00000491668 PACRGLQ8N7B6 248 aa10.93□□□□□ -0.66
SEC61A1-206ENST00000491668 NOXO1Q8NFA2 376 aa10.93□□□□□ -0.66
SEC61A1-206ENST00000491668 IL17RDQ8NFM7 739 aa10.93□□□□□ -0.66
SEC61A1-206ENST00000491668 OTULINQ96BN8 352 aa10.93□□□□□ -0.66
SEC61A1-206ENST00000491668 FOXN4Q96NZ1 517 aa10.93□□□□□ -0.66
SEC61A1-206ENST00000491668 RBP7Q96R05 134 aa10.93□□□□□ -0.66
SEC61A1-206ENST00000491668 SLC29A1Q99808 456 aa10.93□□□□□ -0.66
SEC61A1-206ENST00000491668 SH3GL3Q99963 347 aa10.93□□□□□ -0.66
SEC61A1-206ENST00000491668 VRK1Q99986 396 aaPredicted RBP10.93□□□□□ -0.66
SEC61A1-206ENST00000491668 RERGLQ9H628 205 aa10.93□□□□□ -0.66
SEC61A1-206ENST00000491668 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.92□□□□□ -0.669e-15■■□□□ 12.1
SEC61A1-206ENST00000491668 IGHV4-61A0A0C4DH41 118 aa10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 H7C1C5 153 aa10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 BHLHE40O14503 412 aa10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 ARPC3O15145 178 aa10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 DHHO43323 396 aa10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 TRMUO75648 421 aaKnown RBP10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 TP53P04637 393 aaPredicted RBP10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 HMGN1P05114 100 aa10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 QDPRP09417 244 aa10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 CSF3P09919 207 aa10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 IGHV4-31P0DP07 118 aa10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 HIST1H1CP16403 213 aaKnown RBP10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 USF1P22415 310 aaPredicted RBP10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 GRK5P34947 590 aa10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 NR4A2P43354 598 aa10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 ZNF133P52736 654 aaPredicted RBP10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 LCN6P62502 163 aa10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 PTGES3Q15185 160 aaKnown RBP10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 OGFRL1Q5TC84 451 aaPredicted RBP10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 TMEM236Q5W0B7 351 aa10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 LEG1Q6P5S2 330 aa10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 FAM122BQ7Z309 247 aa10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 LRP11Q86VZ4 500 aa10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 LNX2Q8N448 690 aa10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 ZNF555Q8NEP9 628 aa10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 OR52E2Q8NGJ4 325 aa10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 OR4Q3Q8NH05 313 aa10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 OR4K13Q8NH42 304 aa10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 ZNF519Q8TB69 540 aa10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 FNDC8Q8TC99 324 aa10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 MCHR2Q969V1 340 aa10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 ALG12Q9BV10 488 aa10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 MRPL37Q9BZE1 423 aaKnown RBP10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 SMPD3Q9NY59 655 aaPredicted RBP10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 KLHL21Q9UJP4 597 aa10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 UGT2A1Q9Y4X1 527 aa10.92□□□□□ -0.66
SEC61A1-206ENST00000491668 IGKV1D-43A0A0B4J1Z2 117 aa10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 PRSS37A4D1T9 235 aa10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 A8MV72 311 aaPredicted RBP10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 CENPBD1B2RD01 187 aa10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 TXNDC12O95881 172 aa10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 SERPINA5P05154 406 aa10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 OR8G3PP0DMU2 310 aa10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 ZNF3P17036 446 aa10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 PAICSP22234 425 aaKnown RBP10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 GUCA1AP43080 201 aaPredicted RBP10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 CENPAP49450 140 aa10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 PDLIM4P50479 330 aa10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 ZNF84P51523 738 aa10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 CDK5Q00535 292 aa10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 SNAPC1Q16533 368 aa10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 MESTQ5EB52 335 aa10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 THEM4Q5T1C6 240 aa10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 SDR9C7Q8NEX9 313 aa10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 NSMAFQ92636 917 aa10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 HDAC2Q92769 488 aaKnown RBP10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 MRPL24Q96A35 216 aaKnown RBP10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 RDH12Q96NR8 316 aa10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 KCNK17Q96T54 332 aa10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 NMNAT3Q96T66 252 aa10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 SOX7Q9BT81 388 aa10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 GABARAPL3Q9BY60 117 aa10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 TOR3AQ9H497 397 aa10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 SLC25A19Q9HC21 320 aa10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 TVP23BQ9NYZ1 205 aa10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 MYEF2Q9P2K5 600 aaKnown RBP10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 FKBP7Q9Y680 259 aa10.91□□□□□ -0.66
SEC61A1-206ENST00000491668 LOC390937A0A1W2PQ73 354 aa10.9□□□□□ -0.66
SEC61A1-206ENST00000491668 SLC22A23A1A5C7 686 aa10.9□□□□□ -0.66
SEC61A1-206ENST00000491668 NDUFS8O00217 210 aa10.9□□□□□ -0.66
SEC61A1-206ENST00000491668 AHCYL1O43865 530 aa10.9□□□□□ -0.66
SEC61A1-206ENST00000491668 UBL3O95164 117 aa10.9□□□□□ -0.66
SEC61A1-206ENST00000491668 SLC2A10O95528 541 aa10.9□□□□□ -0.66
SEC61A1-206ENST00000491668 SNAP29O95721 258 aa10.9□□□□□ -0.66
SEC61A1-206ENST00000491668 ADRA2AP08913 450 aa10.9□□□□□ -0.66
SEC61A1-206ENST00000491668 MMP7P09237 267 aaPredicted RBP10.9□□□□□ -0.66
SEC61A1-206ENST00000491668 CCL2P13500 99 aa10.9□□□□□ -0.66
SEC61A1-206ENST00000491668 GLRXP35754 106 aa10.9□□□□□ -0.66
SEC61A1-206ENST00000491668 CDKN2AP42771 156 aaKnown RBP10.9□□□□□ -0.66
SEC61A1-206ENST00000491668 CDC42P60953 191 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms