RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 MAPK8IP3Q9UPT6 1336 aa2.38□□□□□ -2.03
CCDC39-206ENST00000489868 GLYATL1P3A0A0U1RQE8 302 aa2.37□□□□□ -2.03
CCDC39-206ENST00000489868 CST1P01037 141 aa2.37□□□□□ -2.03
CCDC39-206ENST00000489868 IGHDP01880 384 aa2.37□□□□□ -2.03
CCDC39-206ENST00000489868 CD3GP09693 182 aa2.37□□□□□ -2.03
CCDC39-206ENST00000489868 OR8U9P0C7N5 309 aa2.37□□□□□ -2.03
CCDC39-206ENST00000489868 COL8A2P25067 703 aa2.37□□□□□ -2.03
CCDC39-206ENST00000489868 CASP14P31944 242 aa2.37□□□□□ -2.03
CCDC39-206ENST00000489868 PRRX1P54821 245 aa2.37□□□□□ -2.03
CCDC39-206ENST00000489868 METTL13Q8N6R0 699 aa2.37□□□□□ -2.03
CCDC39-206ENST00000489868 FBXL13Q8NEE6 735 aa2.37□□□□□ -2.03
CCDC39-206ENST00000489868 B3GNT7Q8NFL0 401 aa2.37□□□□□ -2.03
CCDC39-206ENST00000489868 LILRB4Q8NHJ6 448 aa2.37□□□□□ -2.03
CCDC39-206ENST00000489868 ZNF502Q8TBZ5 544 aa2.37□□□□□ -2.03
CCDC39-206ENST00000489868 NT5C3BQ969T7 300 aa2.37□□□□□ -2.03
CCDC39-206ENST00000489868 NTAN1Q96AB6 310 aa2.37□□□□□ -2.03
CCDC39-206ENST00000489868 GALNT14Q96FL9 552 aa2.37□□□□□ -2.03
CCDC39-206ENST00000489868 CNDP1Q96KN2 507 aa2.37□□□□□ -2.03
CCDC39-206ENST00000489868 TEKT3Q9BXF9 490 aa2.37□□□□□ -2.03
CCDC39-206ENST00000489868 FAM49BQ9NUQ9 324 aa2.37□□□□□ -2.03
CCDC39-206ENST00000489868 KIR2DS1A0A191URI9 304 aa2.36□□□□□ -2.03
CCDC39-206ENST00000489868 VGLL3A8MV65 326 aa2.36□□□□□ -2.03
CCDC39-206ENST00000489868 L7N2F9 121 aa2.36□□□□□ -2.03
CCDC39-206ENST00000489868 ZNF735P0CB33 412 aa2.36□□□□□ -2.03
CCDC39-206ENST00000489868 NSG1P42857 185 aa2.36□□□□□ -2.03
CCDC39-206ENST00000489868 KRTAP12-3P60328 96 aa2.36□□□□□ -2.03
CCDC39-206ENST00000489868 PIGHQ14442 188 aaPredicted RBP2.36□□□□□ -2.03
CCDC39-206ENST00000489868 KIR2DS1Q14954 304 aa2.36□□□□□ -2.03
CCDC39-206ENST00000489868 CASC1Q6TDU7 716 aa2.36□□□□□ -2.03
CCDC39-206ENST00000489868 CCDC73Q6ZRK6 1079 aa2.36□□□□□ -2.03
CCDC39-206ENST00000489868 OR10AD1Q8NGE0 317 aa2.36□□□□□ -2.03
CCDC39-206ENST00000489868 OR5B3Q8NH48 314 aa2.36□□□□□ -2.03
CCDC39-206ENST00000489868 SLC7A13Q8TCU3 470 aa2.36□□□□□ -2.03
CCDC39-206ENST00000489868 UBE2Q2Q8WVN8 375 aa2.36□□□□□ -2.03
CCDC39-206ENST00000489868 PTX4Q96A99 478 aa2.36□□□□□ -2.03
CCDC39-206ENST00000489868 ZBTB18Q99592 522 aa2.36□□□□□ -2.03
CCDC39-206ENST00000489868 ATP5SQ99766 215 aa2.36□□□□□ -2.03
CCDC39-206ENST00000489868 NEUROG2Q9H2A3 272 aa2.36□□□□□ -2.03
CCDC39-206ENST00000489868 LRRC40Q9H9A6 602 aa2.36□□□□□ -2.03
CCDC39-206ENST00000489868 KLHL28Q9NXS3 571 aa2.36□□□□□ -2.03
CCDC39-206ENST00000489868 GOLT1BQ9Y3E0 138 aa2.36□□□□□ -2.03
CCDC39-206ENST00000489868 CSDC2Q9Y534 153 aaKnown RBP2.36□□□□□ -2.03
CCDC39-206ENST00000489868 KCNE3Q9Y6H6 103 aa2.36□□□□□ -2.03
CCDC39-206ENST00000489868 FAM47DPA6NHR8 397 aa2.35□□□□□ -2.03
CCDC39-206ENST00000489868 CD34P28906 385 aa2.35□□□□□ -2.03
CCDC39-206ENST00000489868 UBE2NP61088 152 aaKnown RBP2.35□□□□□ -2.03
CCDC39-206ENST00000489868 IFT88Q13099 833 aa2.35□□□□□ -2.03
CCDC39-206ENST00000489868 ZNF726P1Q15940 193 aa2.35□□□□□ -2.03
CCDC39-206ENST00000489868 RGS9BPQ6ZS82 235 aa2.35□□□□□ -2.03
CCDC39-206ENST00000489868 ZNF547Q8IVP9 402 aa2.35□□□□□ -2.03
CCDC39-206ENST00000489868 LIX1Q8N485 282 aa2.35□□□□□ -2.03
CCDC39-206ENST00000489868 LRRC52Q8N7C0 313 aa2.35□□□□□ -2.03
CCDC39-206ENST00000489868 ST20-AS1Q8NBB2 130 aa2.35□□□□□ -2.03
CCDC39-206ENST00000489868 SLC25A46Q96AG3 418 aa2.35□□□□□ -2.03
CCDC39-206ENST00000489868 FGF23Q9GZV9 251 aaPredicted RBP2.35□□□□□ -2.03
CCDC39-206ENST00000489868 PISDQ9UG56 409 aa2.35□□□□□ -2.03
CCDC39-206ENST00000489868 NID2Q14112 1375 aa2.35□□□□□ -2.03
CCDC39-206ENST00000489868 FAM240BA0A1B0GVZ2 78 aa2.34□□□□□ -2.03
CCDC39-206ENST00000489868 DNASE2O00115 360 aaPredicted RBP2.34□□□□□ -2.03
CCDC39-206ENST00000489868 NUPL2O15504 423 aaKnown RBP2.34□□□□□ -2.03
CCDC39-206ENST00000489868 HLA-DQB1P01920 261 aa2.34□□□□□ -2.03
CCDC39-206ENST00000489868 MCF2P10911 925 aa2.34□□□□□ -2.03
CCDC39-206ENST00000489868 F2RP25116 425 aa2.34□□□□□ -2.03
CCDC39-206ENST00000489868 LOXP28300 417 aaPredicted RBP2.34□□□□□ -2.03
CCDC39-206ENST00000489868 PRPHP41219 470 aa2.34□□□□□ -2.03
CCDC39-206ENST00000489868 PRMT2P55345 433 aa2.34□□□□□ -2.03
CCDC39-206ENST00000489868 RPL23AP62750 156 aaKnown RBP2.34□□□□□ -2.03
CCDC39-206ENST00000489868 MEF2BQ02080 365 aaPredicted RBP2.34□□□□□ -2.03
CCDC39-206ENST00000489868 KRTAP6-3Q3LI67 103 aa2.34□□□□□ -2.03
CCDC39-206ENST00000489868 RNASE13Q5GAN3 156 aaKnown RBP2.34□□□□□ -2.03
CCDC39-206ENST00000489868 AVPI1Q5T686 147 aa2.34□□□□□ -2.03
CCDC39-206ENST00000489868 SASS6Q6UVJ0 657 aa2.34□□□□□ -2.03
CCDC39-206ENST00000489868 OR13G1Q8NGZ3 307 aa2.34□□□□□ -2.03
CCDC39-206ENST00000489868 OR5B12Q96R08 314 aa2.34□□□□□ -2.03
CCDC39-206ENST00000489868 C8orf17Q9NRJ1 99 aa2.34□□□□□ -2.03
CCDC39-206ENST00000489868 NUP50Q9UKX7 468 aa2.34□□□□□ -2.03
CCDC39-206ENST00000489868 VANGL2Q9ULK5 521 aa2.34□□□□□ -2.03
CCDC39-206ENST00000489868 DENND4AQ7Z401 1863 aa2.34□□□□□ -2.03
CCDC39-206ENST00000489868 CHST1O43916 411 aa2.33□□□□□ -2.04
CCDC39-206ENST00000489868 REM1O75628 298 aa2.33□□□□□ -2.04
CCDC39-206ENST00000489868 SERPINA5P05154 406 aa2.33□□□□□ -2.04
CCDC39-206ENST00000489868 CRYGBP07316 175 aa2.33□□□□□ -2.04
CCDC39-206ENST00000489868 TAGLN2P37802 199 aaKnown RBP2.33□□□□□ -2.04
CCDC39-206ENST00000489868 CSNK1EP49674 416 aaKnown RBP2.33□□□□□ -2.04
CCDC39-206ENST00000489868 GPR151Q8TDV0 419 aa2.33□□□□□ -2.04
CCDC39-206ENST00000489868 SHC3Q92529 594 aa2.33□□□□□ -2.04
CCDC39-206ENST00000489868 STARD10Q9Y365 291 aa2.33□□□□□ -2.04
CCDC39-206ENST00000489868 FBN1P35555 2871 aaKnown RBP2.33□□□□□ -2.04
CCDC39-206ENST00000489868 KANK1Q14678 1352 aa2.33□□□□□ -2.04
CCDC39-206ENST00000489868 UBXN8O00124 270 aa2.32□□□□□ -2.04
CCDC39-206ENST00000489868 SERPINA3P01011 423 aa2.32□□□□□ -2.04
CCDC39-206ENST00000489868 IGLV3-25P01717 112 aa2.32□□□□□ -2.04
CCDC39-206ENST00000489868 EIF4EP06730 217 aaKnown RBP2.32□□□□□ -2.04
CCDC39-206ENST00000489868 CTSLP07711 333 aa2.32□□□□□ -2.04
CCDC39-206ENST00000489868 WARSP23381 471 aaKnown RBP2.32□□□□□ -2.04
CCDC39-206ENST00000489868 DCKP27707 260 aa2.32□□□□□ -2.04
CCDC39-206ENST00000489868 TMED10P49755 219 aaKnown RBP2.32□□□□□ -2.04
CCDC39-206ENST00000489868 TAS2R31P59538 309 aa2.32□□□□□ -2.04
CCDC39-206ENST00000489868 CRADDP78560 199 aa2.32□□□□□ -2.04
CCDC39-206ENST00000489868 CDK5Q00535 292 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms